RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
CCNK-202ENST00000553636 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
CCNK-202ENST00000553636 SLIT2O94813 1529 aa16.61■□□□□ 0.25
CCNK-202ENST00000553636 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
CCNK-202ENST00000553636 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
CCNK-202ENST00000553636 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
CCNK-202ENST00000553636 ACEP12821 1306 aa16.6■□□□□ 0.25
CCNK-202ENST00000553636 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
CCNK-202ENST00000553636 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
CCNK-202ENST00000553636 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
CCNK-202ENST00000553636 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
CCNK-202ENST00000553636 GLI3P10071 1580 aa16.57■□□□□ 0.24
CCNK-202ENST00000553636 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
CCNK-202ENST00000553636 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
CCNK-202ENST00000553636 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
CCNK-202ENST00000553636 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
CCNK-202ENST00000553636 EVC2Q86UK5 1308 aa16.55■□□□□ 0.24
CCNK-202ENST00000553636 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
CCNK-202ENST00000553636 GJD4Q96KN9 370 aaPredicted RBP16.55■□□□□ 0.24
CCNK-202ENST00000553636 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCNK-202ENST00000553636 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
CCNK-202ENST00000553636 FAM83GA6ND36 823 aa16.53■□□□□ 0.24
CCNK-202ENST00000553636 NRKQ7Z2Y5 1582 aa16.52■□□□□ 0.24
CCNK-202ENST00000553636 CABP1Q9NZU7 370 aa16.52■□□□□ 0.24
CCNK-202ENST00000553636 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.24
CCNK-202ENST00000553636 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
CCNK-202ENST00000553636 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
CCNK-202ENST00000553636 VPS72Q15906 364 aa16.5■□□□□ 0.23
CCNK-202ENST00000553636 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
CCNK-202ENST00000553636 BTG4Q9NY30 223 aa16.5■□□□□ 0.23
CCNK-202ENST00000553636 USP6P35125 1406 aa16.5■□□□□ 0.23
CCNK-202ENST00000553636 ATAD2Q6PL18 1390 aa16.5■□□□□ 0.23
CCNK-202ENST00000553636 KIAA0232Q92628 1395 aa16.5■□□□□ 0.23
CCNK-202ENST00000553636 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
CCNK-202ENST00000553636 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
CCNK-202ENST00000553636 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
CCNK-202ENST00000553636 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
CCNK-202ENST00000553636 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
CCNK-202ENST00000553636 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
CCNK-202ENST00000553636 BRD4O60885 1362 aaPredicted RBP16.46■□□□□ 0.23
CCNK-202ENST00000553636 USP19O94966 1318 aa16.45■□□□□ 0.22
CCNK-202ENST00000553636 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
CCNK-202ENST00000553636 A0A0G2JS52 829 aa16.44■□□□□ 0.22
CCNK-202ENST00000553636 MYT1Q01538 1121 aa16.44■□□□□ 0.22
CCNK-202ENST00000553636 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
CCNK-202ENST00000553636 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
CCNK-202ENST00000553636 SEPT12Q8IYM1 358 aa16.43■□□□□ 0.22
CCNK-202ENST00000553636 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
CCNK-202ENST00000553636 SLIT3O75094 1523 aa16.42■□□□□ 0.22
CCNK-202ENST00000553636 NLRP6P59044 892 aa16.42■□□□□ 0.22
CCNK-202ENST00000553636 FAM98CQ17RN3 349 aaKnown RBP16.42■□□□□ 0.22
CCNK-202ENST00000553636 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
CCNK-202ENST00000553636 CPDO75976 1380 aa16.41■□□□□ 0.22
CCNK-202ENST00000553636 KTN1Q86UP2 1357 aaKnown RBP16.41■□□□□ 0.22
CCNK-202ENST00000553636 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
CCNK-202ENST00000553636 SPATA31A5Q5VU36 1347 aa16.41■□□□□ 0.22
CCNK-202ENST00000553636 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
CCNK-202ENST00000553636 SPATA31A7Q8IWB4 1347 aa16.41■□□□□ 0.22
CCNK-202ENST00000553636 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
CCNK-202ENST00000553636 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
CCNK-202ENST00000553636 GCP02774 474 aa16.4■□□□□ 0.22
CCNK-202ENST00000553636 TMC1Q8TDI8 760 aa16.4■□□□□ 0.22
CCNK-202ENST00000553636 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
CCNK-202ENST00000553636 THSD7AQ9UPZ6 1657 aa16.4■□□□□ 0.22
CCNK-202ENST00000553636 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
CCNK-202ENST00000553636 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
CCNK-202ENST00000553636 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
CCNK-202ENST00000553636 USP47Q96K76 1375 aa16.38■□□□□ 0.21
CCNK-202ENST00000553636 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
CCNK-202ENST00000553636 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
CCNK-202ENST00000553636 EVA1CP58658 441 aa16.37■□□□□ 0.21
CCNK-202ENST00000553636 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
CCNK-202ENST00000553636 TESK2Q96S53 571 aa16.37■□□□□ 0.21
CCNK-202ENST00000553636 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
CCNK-202ENST00000553636 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
CCNK-202ENST00000553636 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
CCNK-202ENST00000553636 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
CCNK-202ENST00000553636 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
CCNK-202ENST00000553636 SOX12O15370 315 aa16.35■□□□□ 0.21
CCNK-202ENST00000553636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCNK-202ENST00000553636 EP400Q96L91 3159 aa16.34■□□□□ 0.21
CCNK-202ENST00000553636 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
CCNK-202ENST00000553636 COL18A1P39060 1754 aa16.34■□□□□ 0.21
CCNK-202ENST00000553636 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
CCNK-202ENST00000553636 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
CCNK-202ENST00000553636 HDGFL2Q7Z4V5 671 aaPredicted RBP16.34■□□□□ 0.21
CCNK-202ENST00000553636 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
CCNK-202ENST00000553636 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
CCNK-202ENST00000553636 NFAT5O94916 1531 aa16.34■□□□□ 0.21
CCNK-202ENST00000553636 RGPD5Q99666 1765 aa16.33■□□□□ 0.21
CCNK-202ENST00000553636 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
CCNK-202ENST00000553636 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
CCNK-202ENST00000553636 TIMELESSQ9UNS1 1208 aa16.33■□□□□ 0.2
CCNK-202ENST00000553636 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
CCNK-202ENST00000553636 EDC4Q6P2E9 1401 aaKnown RBP16.32■□□□□ 0.2
CCNK-202ENST00000553636 NME9Q86XW9 330 aa16.32■□□□□ 0.2
CCNK-202ENST00000553636 CCDC125Q86Z20 511 aa16.32■□□□□ 0.2
CCNK-202ENST00000553636 PUS7Q96PZ0 661 aaKnown RBP16.32■□□□□ 0.2
CCNK-202ENST00000553636 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
CCNK-202ENST00000553636 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms