RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CABLES1Q8TDN4 633 aa31.97■■■□□ 2.71
TDP1-206ENST00000553569 C8orf37Q96NL8 207 aa31.97■■■□□ 2.71
TDP1-206ENST00000553569 MARF1Q9Y4F3 1742 aaKnown RBP31.97■■■□□ 2.71
TDP1-206ENST00000553569 HSPA5P11021 654 aaKnown RBP31.95■■■□□ 2.71
TDP1-206ENST00000553569 RGS17Q9UGC6 210 aaPredicted RBP31.95■■■□□ 2.71
TDP1-206ENST00000553569 PUS7Q96PZ0 661 aaKnown RBP31.94■■■□□ 2.7
TDP1-206ENST00000553569 CRYBG1Q9Y4K1 1723 aa31.92■■■□□ 2.7
TDP1-206ENST00000553569 NUTM2GQ5VZR2 741 aa31.92■■■□□ 2.7
TDP1-206ENST00000553569 MON2Q7Z3U7 1717 aa31.92■■■□□ 2.7
TDP1-206ENST00000553569 CPSF1Q10570 1443 aaKnown RBP31.92■■■□□ 2.7
TDP1-206ENST00000553569 SLC12A5Q9H2X9 1139 aa31.91■■■□□ 2.7
TDP1-206ENST00000553569 NRKQ7Z2Y5 1582 aa31.9■■■□□ 2.7
TDP1-206ENST00000553569 AFF2P51816 1311 aa31.9■■■□□ 2.7
TDP1-206ENST00000553569 BRD4O60885 1362 aaPredicted RBP31.9■■■□□ 2.7
TDP1-206ENST00000553569 KTN1Q86UP2 1357 aaKnown RBP31.9■■■□□ 2.7
TDP1-206ENST00000553569 CD163L1Q9NR16 1453 aa31.9■■■□□ 2.7
TDP1-206ENST00000553569 ABTB2Q8N961 1025 aa31.89■■■□□ 2.7
TDP1-206ENST00000553569 NGLY1Q96IV0 654 aa31.89■■■□□ 2.7
TDP1-206ENST00000553569 ZNF692Q9BU19 519 aaPredicted RBP31.89■■■□□ 2.7
TDP1-206ENST00000553569 PHRF1Q9P1Y6 1649 aaKnown RBP31.88■■■□□ 2.69
TDP1-206ENST00000553569 SSH2Q76I76 1423 aa31.87■■■□□ 2.69
TDP1-206ENST00000553569 NINLQ9Y2I6 1382 aa31.87■■■□□ 2.69
TDP1-206ENST00000553569 CDCA8Q53HL2 280 aa31.87■■■□□ 2.69
TDP1-206ENST00000553569 HDGFL2Q7Z4V5 671 aaPredicted RBP31.86■■■□□ 2.69
TDP1-206ENST00000553569 PIK3C2AO00443 1686 aa31.86■■■□□ 2.69
TDP1-206ENST00000553569 A0A1W2PP64 1363 aa31.84■■■□□ 2.69
TDP1-206ENST00000553569 POTEAQ6S8J7 498 aa31.84■■■□□ 2.69
TDP1-206ENST00000553569 ILDR2Q71H61 639 aa31.84■■■□□ 2.69
TDP1-206ENST00000553569 TTC21BQ7Z4L5 1316 aa31.83■■■□□ 2.69
TDP1-206ENST00000553569 ZNF772Q68DY9 489 aaPredicted RBP31.83■■■□□ 2.69
TDP1-206ENST00000553569 TERF2IPQ9NYB0 399 aa31.83■■■□□ 2.69
TDP1-206ENST00000553569 MYOM1P52179 1685 aa31.81■■■□□ 2.68
TDP1-206ENST00000553569 POLR3GLQ9BT43 218 aa31.8■■■□□ 2.68
TDP1-206ENST00000553569 PLCH1Q4KWH8 1693 aa31.79■■■□□ 2.68
TDP1-206ENST00000553569 TTC21AQ8NDW8 1320 aa31.78■■■□□ 2.68
TDP1-206ENST00000553569 NLRP13Q86W25 1043 aa31.78■■■□□ 2.68
TDP1-206ENST00000553569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.78■■■□□ 2.68
TDP1-206ENST00000553569 USP19O94966 1318 aa31.77■■■□□ 2.68
TDP1-206ENST00000553569 EDC4Q6P2E9 1401 aaKnown RBP31.77■■■□□ 2.68
TDP1-206ENST00000553569 NLRP6P59044 892 aa31.77■■■□□ 2.68
TDP1-206ENST00000553569 USP21Q9UK80 565 aa31.77■■■□□ 2.68
TDP1-206ENST00000553569 ANKRD36BQ8N2N9 1353 aa31.76■■■□□ 2.67
TDP1-206ENST00000553569 FNBP4Q8N3X1 1017 aaPredicted RBP31.75■■■□□ 2.67
TDP1-206ENST00000553569 SLIT2O94813 1529 aa31.73■■■□□ 2.67
TDP1-206ENST00000553569 COL14A1Q05707 1796 aaKnown RBP31.73■■■□□ 2.67
TDP1-206ENST00000553569 SLIT3O75094 1523 aa31.72■■■□□ 2.67
TDP1-206ENST00000553569 KIAA0232Q92628 1395 aa31.71■■■□□ 2.67
TDP1-206ENST00000553569 FAM83GA6ND36 823 aa31.71■■■□□ 2.67
TDP1-206ENST00000553569 ZC3H6P61129 1189 aaKnown RBP31.71■■■□□ 2.67
TDP1-206ENST00000553569 PRDM11Q9NQV5 511 aa31.71■■■□□ 2.67
TDP1-206ENST00000553569 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.71■■■□□ 2.67
TDP1-206ENST00000553569 NWD2Q9ULI1 1742 aa31.71■■■□□ 2.67
TDP1-206ENST00000553569 BCL9LQ86UU0 1499 aa31.71■■■□□ 2.67
TDP1-206ENST00000553569 NME9Q86XW9 330 aa31.7■■■□□ 2.67
TDP1-206ENST00000553569 QTRT2Q9H974 415 aaKnown RBP31.69■■■□□ 2.66
TDP1-206ENST00000553569 GCP02774 474 aa31.68■■■□□ 2.66
TDP1-206ENST00000553569 ZRANB1Q9UGI0 708 aa31.68■■■□□ 2.66
TDP1-206ENST00000553569 USP54Q70EL1 1684 aa31.67■■■□□ 2.66
TDP1-206ENST00000553569 C11orf95C9JLR9 678 aaPredicted RBP31.66■■■□□ 2.66
TDP1-206ENST00000553569 CHRNA2Q15822 529 aa31.66■■■□□ 2.66
TDP1-206ENST00000553569 TRPC5Q9UL62 973 aaPredicted RBP31.66■■■□□ 2.66
TDP1-206ENST00000553569 NRAPQ86VF7 1730 aa31.66■■■□□ 2.66
TDP1-206ENST00000553569 ATRNO75882 1429 aa31.66■■■□□ 2.66
TDP1-206ENST00000553569 SOX12O15370 315 aa31.65■■■□□ 2.66
TDP1-206ENST00000553569 UNC5CLQ8IV45 518 aa31.65■■■□□ 2.66
TDP1-206ENST00000553569 ZBTB7CA1YPR0 619 aa31.63■■■□□ 2.65
TDP1-206ENST00000553569 RXRBP28702 533 aa31.63■■■□□ 2.65
TDP1-206ENST00000553569 BTG4Q9NY30 223 aa31.63■■■□□ 2.65
TDP1-206ENST00000553569 USP31Q70CQ4 1352 aa31.63■■■□□ 2.65
TDP1-206ENST00000553569 CPDO75976 1380 aa31.62■■■□□ 2.65
TDP1-206ENST00000553569 KIF20BQ96Q89 1820 aa31.6■■■□□ 2.65
TDP1-206ENST00000553569 NSD3Q9BZ95 1437 aa31.59■■■□□ 2.65
TDP1-206ENST00000553569 RBM6P78332 1123 aaKnown RBP31.59■■■□□ 2.65
TDP1-206ENST00000553569 NFAT5O94916 1531 aa31.59■■■□□ 2.65
TDP1-206ENST00000553569 OVOS2A0A0J9YW53 1432 aa31.58■■■□□ 2.65
TDP1-206ENST00000553569 OVOS2Q6IE36 1432 aa31.58■■■□□ 2.65
TDP1-206ENST00000553569 KCNH5Q8NCM2 988 aa31.58■■■□□ 2.65
TDP1-206ENST00000553569 KIF7Q2M1P5 1343 aa31.57■■■□□ 2.64
TDP1-206ENST00000553569 LMO7Q8WWI1 1683 aa31.57■■■□□ 2.64
TDP1-206ENST00000553569 CARD14Q9BXL6 1004 aa31.56■■■□□ 2.64
TDP1-206ENST00000553569 CCDC9Q9Y3X0 531 aaKnown RBP31.55■■■□□ 2.64
TDP1-206ENST00000553569 GLI3P10071 1580 aa31.53■■■□□ 2.64
TDP1-206ENST00000553569 VPS72Q15906 364 aa31.53■■■□□ 2.64
TDP1-206ENST00000553569 COG3Q96JB2 828 aa31.53■■■□□ 2.64
TDP1-206ENST00000553569 CAMTA1Q9Y6Y1 1673 aa31.53■■■□□ 2.64
TDP1-206ENST00000553569 GJD4Q96KN9 370 aaPredicted RBP31.52■■■□□ 2.64
TDP1-206ENST00000553569 STRN4Q9NRL3 753 aa31.52■■■□□ 2.64
TDP1-206ENST00000553569 CDK12Q9NYV4 1490 aaPredicted RBP31.52■■■□□ 2.64
TDP1-206ENST00000553569 RGS12O14924 1447 aa31.51■■■□□ 2.64
TDP1-206ENST00000553569 GGNBP2Q9H3C7 697 aa31.51■■■□□ 2.63
TDP1-206ENST00000553569 LTN1O94822 1766 aa31.51■■■□□ 2.63
TDP1-206ENST00000553569 COL18A1P39060 1754 aa31.5■■■□□ 2.63
TDP1-206ENST00000553569 AATKQ6ZMQ8 1374 aa31.49■■■□□ 2.63
TDP1-206ENST00000553569 FYB1O15117 783 aa31.49■■■□□ 2.63
TDP1-206ENST00000553569 ARHGEF25Q86VW2 580 aa31.49■■■□□ 2.63
TDP1-206ENST00000553569 PANK3Q9H999 370 aa31.49■■■□□ 2.63
TDP1-206ENST00000553569 CCDC7Q96M83 1385 aa31.46■■■□□ 2.63
TDP1-206ENST00000553569 RGPD5Q99666 1765 aa31.46■■■□□ 2.63
TDP1-206ENST00000553569 EVA1CP58658 441 aa31.46■■■□□ 2.63
TDP1-206ENST00000553569 COL5A2P05997 1499 aaPredicted RBP31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms