RNA–Protein interactions for RNA: ENST00000553561.1

AL355096.1-201, humanhuman

TSL 3 BASIC

Gene AL355096.1, Length 447 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355096.1-201ENST00000553561 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
AL355096.1-201ENST00000553561 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
AL355096.1-201ENST00000553561 LYPD8Q6UX82 237 aa8.37□□□□□ -1.07
AL355096.1-201ENST00000553561 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
AL355096.1-201ENST00000553561 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
AL355096.1-201ENST00000553561 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
AL355096.1-201ENST00000553561 F12P00748 615 aaPredicted RBP8.35□□□□□ -1.07
AL355096.1-201ENST00000553561 HRCP23327 699 aa8.35□□□□□ -1.07
AL355096.1-201ENST00000553561 MPNDQ8N594 471 aa8.35□□□□□ -1.07
AL355096.1-201ENST00000553561 ALDH1A1P00352 501 aa8.34□□□□□ -1.07
AL355096.1-201ENST00000553561 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
AL355096.1-201ENST00000553561 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
AL355096.1-201ENST00000553561 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
AL355096.1-201ENST00000553561 EHBP1Q8NDI1 1231 aa8.34□□□□□ -1.07
AL355096.1-201ENST00000553561 BAP1Q92560 729 aa8.34□□□□□ -1.07
AL355096.1-201ENST00000553561 TUSC1Q2TAM9 212 aa8.33□□□□□ -1.08
AL355096.1-201ENST00000553561 CUX2O14529 1486 aa8.32□□□□□ -1.08
AL355096.1-201ENST00000553561 PDE4DQ08499 809 aa8.32□□□□□ -1.08
AL355096.1-201ENST00000553561 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
AL355096.1-201ENST00000553561 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
AL355096.1-201ENST00000553561 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 MYSM1Q5VVJ2 828 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 TRIM46Q7Z4K8 759 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 NCAPD3P42695 1498 aa8.31□□□□□ -1.08
AL355096.1-201ENST00000553561 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
AL355096.1-201ENST00000553561 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
AL355096.1-201ENST00000553561 PER1O15534 1290 aaPredicted RBP8.29□□□□□ -1.08
AL355096.1-201ENST00000553561 LILRB3O75022 631 aa8.29□□□□□ -1.08
AL355096.1-201ENST00000553561 WFS1O76024 890 aa8.29□□□□□ -1.08
AL355096.1-201ENST00000553561 QPCTQ16769 361 aa8.29□□□□□ -1.08
AL355096.1-201ENST00000553561 KLF16Q9BXK1 252 aaPredicted RBP8.29□□□□□ -1.08
AL355096.1-201ENST00000553561 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
AL355096.1-201ENST00000553561 ERCC6Q03468 1493 aa8.28□□□□□ -1.08
AL355096.1-201ENST00000553561 WIPF1O43516 503 aa8.28□□□□□ -1.08
AL355096.1-201ENST00000553561 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
AL355096.1-201ENST00000553561 SLC24A3Q9HC58 644 aa8.28□□□□□ -1.08
AL355096.1-201ENST00000553561 ATAD2BQ9ULI0 1458 aa8.27□□□□□ -1.09
AL355096.1-201ENST00000553561 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.09
AL355096.1-201ENST00000553561 CDK15Q96Q40 435 aa8.27□□□□□ -1.09
AL355096.1-201ENST00000553561 SMARCA4P51532 1647 aa8.26□□□□□ -1.09
AL355096.1-201ENST00000553561 HMGXB3Q12766 1538 aa8.26□□□□□ -1.09
AL355096.1-201ENST00000553561 TERTO14746 1132 aaKnown RBP8.26□□□□□ -1.09
AL355096.1-201ENST00000553561 BMP1P13497 986 aa8.26□□□□□ -1.09
AL355096.1-201ENST00000553561 WASF2Q9Y6W5 498 aa8.26□□□□□ -1.09
AL355096.1-201ENST00000553561 CAPN5O15484 640 aaPredicted RBP8.25□□□□□ -1.09
AL355096.1-201ENST00000553561 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
AL355096.1-201ENST00000553561 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
AL355096.1-201ENST00000553561 NESP48681 1621 aa8.23□□□□□ -1.09
AL355096.1-201ENST00000553561 TIMP2P16035 220 aa8.23□□□□□ -1.09
AL355096.1-201ENST00000553561 NNTQ13423 1086 aa8.23□□□□□ -1.09
AL355096.1-201ENST00000553561 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
AL355096.1-201ENST00000553561 C1QTNF2Q9BXJ5 285 aa8.23□□□□□ -1.09
AL355096.1-201ENST00000553561 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
AL355096.1-201ENST00000553561 ADH1CP00326 375 aa8.22□□□□□ -1.09
AL355096.1-201ENST00000553561 CTHP32929 405 aa8.22□□□□□ -1.09
AL355096.1-201ENST00000553561 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
AL355096.1-201ENST00000553561 SH3RF1Q7Z6J0 888 aa8.22□□□□□ -1.09
AL355096.1-201ENST00000553561 GRM5P41594 1212 aa8.21□□□□□ -1.1
AL355096.1-201ENST00000553561 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.1
AL355096.1-201ENST00000553561 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
AL355096.1-201ENST00000553561 THOC2Q8NI27 1593 aaKnown RBP8.21□□□□□ -1.1
AL355096.1-201ENST00000553561 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
AL355096.1-201ENST00000553561 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
AL355096.1-201ENST00000553561 PEG3Q9GZU2 1588 aa8.19□□□□□ -1.1
AL355096.1-201ENST00000553561 NR3C2P08235 984 aa8.19□□□□□ -1.1
AL355096.1-201ENST00000553561 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
AL355096.1-201ENST00000553561 BAZ1AQ9NRL2 1556 aaPredicted RBP8.18□□□□□ -1.1
AL355096.1-201ENST00000553561 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
AL355096.1-201ENST00000553561 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
AL355096.1-201ENST00000553561 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
AL355096.1-201ENST00000553561 BAZ1BQ9UIG0 1483 aaKnown RBP8.18□□□□□ -1.1
AL355096.1-201ENST00000553561 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
AL355096.1-201ENST00000553561 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
AL355096.1-201ENST00000553561 TRMT44Q8IYL2 757 aaKnown RBP8.17□□□□□ -1.1
AL355096.1-201ENST00000553561 NR5A1Q13285 461 aa8.16□□□□□ -1.1
AL355096.1-201ENST00000553561 KIF21AQ7Z4S6 1674 aa8.16□□□□□ -1.1
AL355096.1-201ENST00000553561 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
AL355096.1-201ENST00000553561 LAMC3Q9Y6N6 1575 aa8.16□□□□□ -1.1
AL355096.1-201ENST00000553561 NUTM2BA6NNL0 878 aaPredicted RBP8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 NUTM2EB1AL46 878 aaPredicted RBP8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 H3BM21 787 aa8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 NUTM2DQ5VT03 806 aaPredicted RBP8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 NUTM2AQ8IVF1 878 aaPredicted RBP8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 MAP4K5Q9Y4K4 846 aa8.15□□□□□ -1.1
AL355096.1-201ENST00000553561 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
AL355096.1-201ENST00000553561 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
AL355096.1-201ENST00000553561 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
AL355096.1-201ENST00000553561 PPP2R2DQ66LE6 453 aa8.13□□□□□ -1.11
AL355096.1-201ENST00000553561 HELBQ8NG08 1087 aaPredicted RBP8.13□□□□□ -1.11
AL355096.1-201ENST00000553561 STK17AQ9UEE5 414 aa8.13□□□□□ -1.11
AL355096.1-201ENST00000553561 MROH2BQ7Z745 1585 aa8.13□□□□□ -1.11
AL355096.1-201ENST00000553561 ERBB4Q15303 1308 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms