RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 RGPD8O14715 1765 aaPredicted RBP17.37■□□□□ 0.37
SRP54-203ENST00000553544 CAMKK2Q96RR4 588 aa17.36■□□□□ 0.37
SRP54-203ENST00000553544 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
SRP54-203ENST00000553544 TRIM37O94972 964 aa17.35■□□□□ 0.37
SRP54-203ENST00000553544 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
SRP54-203ENST00000553544 APBA3O96018 575 aa17.34■□□□□ 0.37
SRP54-203ENST00000553544 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
SRP54-203ENST00000553544 DISP2A7MBM2 1401 aa17.33■□□□□ 0.36
SRP54-203ENST00000553544 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
SRP54-203ENST00000553544 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
SRP54-203ENST00000553544 EVA1CP58658 441 aa17.32■□□□□ 0.36
SRP54-203ENST00000553544 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
SRP54-203ENST00000553544 PDE3BQ13370 1112 aa17.31■□□□□ 0.36
SRP54-203ENST00000553544 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
SRP54-203ENST00000553544 NBPF14Q5TI25 921 aa17.31■□□□□ 0.36
SRP54-203ENST00000553544 DLC1Q96QB1 1528 aa17.31■□□□□ 0.36
SRP54-203ENST00000553544 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
SRP54-203ENST00000553544 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
SRP54-203ENST00000553544 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
SRP54-203ENST00000553544 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
SRP54-203ENST00000553544 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
SRP54-203ENST00000553544 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
SRP54-203ENST00000553544 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
SRP54-203ENST00000553544 ZC3H6P61129 1189 aaKnown RBP17.28■□□□□ 0.36
SRP54-203ENST00000553544 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
SRP54-203ENST00000553544 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.36
SRP54-203ENST00000553544 NRAPQ86VF7 1730 aa17.27■□□□□ 0.36
SRP54-203ENST00000553544 YY1P25490 414 aa17.27■□□□□ 0.36
SRP54-203ENST00000553544 BARGINQ6ZT62 677 aa17.27■□□□□ 0.36
SRP54-203ENST00000553544 DCAF11Q8TEB1 546 aa17.27■□□□□ 0.36
SRP54-203ENST00000553544 STAC3Q96MF2 364 aa17.27■□□□□ 0.36
SRP54-203ENST00000553544 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
SRP54-203ENST00000553544 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
SRP54-203ENST00000553544 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
SRP54-203ENST00000553544 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
SRP54-203ENST00000553544 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
SRP54-203ENST00000553544 TULP4Q9NRJ4 1543 aa17.23■□□□□ 0.35
SRP54-203ENST00000553544 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
SRP54-203ENST00000553544 SPON1Q9HCB6 807 aa17.23■□□□□ 0.35
SRP54-203ENST00000553544 PPP1R1BQ9UD71 204 aaPredicted RBP17.23■□□□□ 0.35
SRP54-203ENST00000553544 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
SRP54-203ENST00000553544 CDK19Q9BWU1 502 aa17.22■□□□□ 0.35
SRP54-203ENST00000553544 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
SRP54-203ENST00000553544 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
SRP54-203ENST00000553544 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
SRP54-203ENST00000553544 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
SRP54-203ENST00000553544 THRAP3Q9Y2W1 955 aaKnown RBP17.21■□□□□ 0.35
SRP54-203ENST00000553544 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
SRP54-203ENST00000553544 KCNQ2O43526 872 aa17.2■□□□□ 0.34
SRP54-203ENST00000553544 ACEP12821 1306 aa17.2■□□□□ 0.34
SRP54-203ENST00000553544 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
SRP54-203ENST00000553544 SSH2Q76I76 1423 aa17.17■□□□□ 0.34
SRP54-203ENST00000553544 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
SRP54-203ENST00000553544 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
SRP54-203ENST00000553544 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
SRP54-203ENST00000553544 GCP02774 474 aa17.15■□□□□ 0.34
SRP54-203ENST00000553544 ATP7BP35670 1465 aa17.15■□□□□ 0.34
SRP54-203ENST00000553544 CPDO75976 1380 aa17.15■□□□□ 0.34
SRP54-203ENST00000553544 PLSCR1O15162 318 aa17.14■□□□□ 0.33
SRP54-203ENST00000553544 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
SRP54-203ENST00000553544 CRYBG1Q9Y4K1 1723 aa17.12■□□□□ 0.33
SRP54-203ENST00000553544 NINLQ9Y2I6 1382 aa17.11■□□□□ 0.33
SRP54-203ENST00000553544 DDB1Q16531 1140 aa17.1■□□□□ 0.33
SRP54-203ENST00000553544 USP19O94966 1318 aa17.1■□□□□ 0.33
SRP54-203ENST00000553544 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
SRP54-203ENST00000553544 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
SRP54-203ENST00000553544 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
SRP54-203ENST00000553544 NLRP6P59044 892 aa17.08■□□□□ 0.32
SRP54-203ENST00000553544 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SRP54-203ENST00000553544 CRB1P82279 1406 aa17.06■□□□□ 0.32
SRP54-203ENST00000553544 ITSN1Q15811 1721 aa17.06■□□□□ 0.32
SRP54-203ENST00000553544 PHRF1Q9P1Y6 1649 aaKnown RBP17.06■□□□□ 0.32
SRP54-203ENST00000553544 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
SRP54-203ENST00000553544 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
SRP54-203ENST00000553544 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
SRP54-203ENST00000553544 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
SRP54-203ENST00000553544 KIAA1210Q9ULL0 1709 aa17.05■□□□□ 0.32
SRP54-203ENST00000553544 RREB1Q92766 1687 aa17.05■□□□□ 0.32
SRP54-203ENST00000553544 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
SRP54-203ENST00000553544 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
SRP54-203ENST00000553544 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
SRP54-203ENST00000553544 PROM2Q8N271 834 aa17.04■□□□□ 0.32
SRP54-203ENST00000553544 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
SRP54-203ENST00000553544 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
SRP54-203ENST00000553544 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
SRP54-203ENST00000553544 ZBTB7AO95365 584 aa17.03■□□□□ 0.32
SRP54-203ENST00000553544 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
SRP54-203ENST00000553544 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
SRP54-203ENST00000553544 CABP1Q9NZU7 370 aa17.03■□□□□ 0.32
SRP54-203ENST00000553544 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.32
SRP54-203ENST00000553544 MARCH10Q8NA82 808 aaPredicted RBP17.02■□□□□ 0.32
SRP54-203ENST00000553544 PDGFDQ9GZP0 370 aaPredicted RBP17.02■□□□□ 0.32
SRP54-203ENST00000553544 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
SRP54-203ENST00000553544 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.31
SRP54-203ENST00000553544 STK32BQ9NY57 414 aa17.01■□□□□ 0.31
SRP54-203ENST00000553544 NRKQ7Z2Y5 1582 aa17.01■□□□□ 0.31
SRP54-203ENST00000553544 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
SRP54-203ENST00000553544 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
SRP54-203ENST00000553544 EXOC5O00471 708 aa17■□□□□ 0.31
SRP54-203ENST00000553544 PTGER2P43116 358 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms