RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 POLR3AO14802 1390 aaPredicted RBP33.42■■■□□ 2.94
TDP1-205ENST00000553527 NUTM2GQ5VZR2 741 aa33.41■■■□□ 2.94
TDP1-205ENST00000553527 ABCA3Q99758 1704 aa33.41■■■□□ 2.94
TDP1-205ENST00000553527 TRPC5Q9UL62 973 aaPredicted RBP33.4■■■□□ 2.94
TDP1-205ENST00000553527 RBM6P78332 1123 aaKnown RBP33.39■■■□□ 2.94
TDP1-205ENST00000553527 BCL9LQ86UU0 1499 aa33.35■■■□□ 2.93
TDP1-205ENST00000553527 ABTB2Q8N961 1025 aa33.34■■■□□ 2.93
TDP1-205ENST00000553527 FAM83GA6ND36 823 aa33.32■■■□□ 2.92
TDP1-205ENST00000553527 UNC5CLQ8IV45 518 aa33.31■■■□□ 2.92
TDP1-205ENST00000553527 ST20-MTHFSA0A0A6YYL1 179 aa33.3■■■□□ 2.92
TDP1-205ENST00000553527 TIMELESSQ9UNS1 1208 aa33.3■■■□□ 2.92
TDP1-205ENST00000553527 ATRNO75882 1429 aa33.29■■■□□ 2.92
TDP1-205ENST00000553527 SLIT2O94813 1529 aa33.28■■■□□ 2.92
TDP1-205ENST00000553527 SBNO2Q9Y2G9 1366 aa33.28■■■□□ 2.92
TDP1-205ENST00000553527 PLCH1Q4KWH8 1693 aa33.28■■■□□ 2.92
TDP1-205ENST00000553527 CRYBG1Q9Y4K1 1723 aa33.28■■■□□ 2.92
TDP1-205ENST00000553527 ATAD2Q6PL18 1390 aa33.26■■■□□ 2.92
TDP1-205ENST00000553527 TMC1Q8TDI8 760 aa33.25■■■□□ 2.91
TDP1-205ENST00000553527 GJD4Q96KN9 370 aaPredicted RBP33.25■■■□□ 2.91
TDP1-205ENST00000553527 CDK12Q9NYV4 1490 aaPredicted RBP33.25■■■□□ 2.91
TDP1-205ENST00000553527 ZC3H6P61129 1189 aaKnown RBP33.24■■■□□ 2.91
TDP1-205ENST00000553527 CCDC9Q9Y3X0 531 aaKnown RBP33.24■■■□□ 2.91
TDP1-205ENST00000553527 USP6P35125 1406 aa33.24■■■□□ 2.91
TDP1-205ENST00000553527 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.24■■■□□ 2.91
TDP1-205ENST00000553527 RGS12O14924 1447 aa33.23■■■□□ 2.91
TDP1-205ENST00000553527 BTG4Q9NY30 223 aa33.23■■■□□ 2.91
TDP1-205ENST00000553527 PHRF1Q9P1Y6 1649 aaKnown RBP33.22■■■□□ 2.91
TDP1-205ENST00000553527 PRDM11Q9NQV5 511 aa33.22■■■□□ 2.91
TDP1-205ENST00000553527 NWD2Q9ULI1 1742 aa33.22■■■□□ 2.91
TDP1-205ENST00000553527 NLRP13Q86W25 1043 aa33.21■■■□□ 2.91
TDP1-205ENST00000553527 ZNF692Q9BU19 519 aaPredicted RBP33.21■■■□□ 2.91
TDP1-205ENST00000553527 AKAP12Q02952 1782 aa33.21■■■□□ 2.91
TDP1-205ENST00000553527 CHRNA2Q15822 529 aa33.2■■■□□ 2.91
TDP1-205ENST00000553527 TESK2Q96S53 571 aa33.2■■■□□ 2.91
TDP1-205ENST00000553527 USP47Q96K76 1375 aa33.19■■■□□ 2.9
TDP1-205ENST00000553527 COL14A1Q05707 1796 aaKnown RBP33.19■■■□□ 2.9
TDP1-205ENST00000553527 NLRP6P59044 892 aa33.18■■■□□ 2.9
TDP1-205ENST00000553527 KIAA0232Q92628 1395 aa33.18■■■□□ 2.9
TDP1-205ENST00000553527 SLC12A5Q9H2X9 1139 aa33.17■■■□□ 2.9
TDP1-205ENST00000553527 BRD4O60885 1362 aaPredicted RBP33.17■■■□□ 2.9
TDP1-205ENST00000553527 KTN1Q86UP2 1357 aaKnown RBP33.16■■■□□ 2.9
TDP1-205ENST00000553527 VPS72Q15906 364 aa33.15■■■□□ 2.9
TDP1-205ENST00000553527 TTC21BQ7Z4L5 1316 aa33.14■■■□□ 2.9
TDP1-205ENST00000553527 GLI3P10071 1580 aa33.13■■■□□ 2.89
TDP1-205ENST00000553527 SSH2Q76I76 1423 aa33.12■■■□□ 2.89
TDP1-205ENST00000553527 ZBTB7CA1YPR0 619 aa33.12■■■□□ 2.89
TDP1-205ENST00000553527 GCP02774 474 aa33.12■■■□□ 2.89
TDP1-205ENST00000553527 CPSF1Q10570 1443 aaKnown RBP33.11■■■□□ 2.89
TDP1-205ENST00000553527 NRAPQ86VF7 1730 aa33.11■■■□□ 2.89
TDP1-205ENST00000553527 USP19O94966 1318 aa33.1■■■□□ 2.89
TDP1-205ENST00000553527 SLC24A1O60721 1099 aa33.1■■■□□ 2.89
TDP1-205ENST00000553527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.1■■■□□ 2.89
TDP1-205ENST00000553527 PIK3C2AO00443 1686 aa33.1■■■□□ 2.89
TDP1-205ENST00000553527 NRKQ7Z2Y5 1582 aa33.09■■■□□ 2.89
TDP1-205ENST00000553527 HDGFL2Q7Z4V5 671 aaPredicted RBP33.09■■■□□ 2.89
TDP1-205ENST00000553527 STRN4Q9NRL3 753 aa33.09■■■□□ 2.89
TDP1-205ENST00000553527 TMF1P82094 1093 aa33.08■■■□□ 2.89
TDP1-205ENST00000553527 UPF1Q92900 1129 aaKnown RBP eCLIP33.08■■■□□ 2.89
TDP1-205ENST00000553527 PUS7Q96PZ0 661 aaKnown RBP33.08■■■□□ 2.89
TDP1-205ENST00000553527 MON2Q7Z3U7 1717 aa33.08■■■□□ 2.89
TDP1-205ENST00000553527 SOX12O15370 315 aa33.06■■■□□ 2.88
TDP1-205ENST00000553527 TTC21AQ8NDW8 1320 aa33.05■■■□□ 2.88
TDP1-205ENST00000553527 A0A0G2JS52 829 aa33.05■■■□□ 2.88
TDP1-205ENST00000553527 EVA1CP58658 441 aa33.05■■■□□ 2.88
TDP1-205ENST00000553527 MYT1Q01538 1121 aa33.05■■■□□ 2.88
TDP1-205ENST00000553527 TERF2IPQ9NYB0 399 aa33.05■■■□□ 2.88
TDP1-205ENST00000553527 CD163L1Q9NR16 1453 aa33.05■■■□□ 2.88
TDP1-205ENST00000553527 SEPT12Q8IYM1 358 aa33.02■■■□□ 2.88
TDP1-205ENST00000553527 ZRANB1Q9UGI0 708 aa33.02■■■□□ 2.88
TDP1-205ENST00000553527 BRWD3Q6RI45 1802 aa33.01■■■□□ 2.87
TDP1-205ENST00000553527 FAM98CQ17RN3 349 aaKnown RBP33.01■■■□□ 2.87
TDP1-205ENST00000553527 A0A1W2PP64 1363 aa32.99■■■□□ 2.87
TDP1-205ENST00000553527 CPDO75976 1380 aa32.99■■■□□ 2.87
TDP1-205ENST00000553527 NME9Q86XW9 330 aa32.99■■■□□ 2.87
TDP1-205ENST00000553527 SPATA31A5Q5VU36 1347 aa32.98■■■□□ 2.87
TDP1-205ENST00000553527 SPATA31A7Q8IWB4 1347 aa32.98■■■□□ 2.87
TDP1-205ENST00000553527 SLIT3O75094 1523 aa32.97■■■□□ 2.87
TDP1-205ENST00000553527 USP35Q9P2H5 1018 aa32.97■■■□□ 2.87
TDP1-205ENST00000553527 CAMTA1Q9Y6Y1 1673 aa32.97■■■□□ 2.87
TDP1-205ENST00000553527 ONECUT3O60422 494 aaPredicted RBP32.95■■■□□ 2.87
TDP1-205ENST00000553527 KCNH5Q8NCM2 988 aa32.95■■■□□ 2.87
TDP1-205ENST00000553527 CDCA8Q53HL2 280 aa32.93■■■□□ 2.86
TDP1-205ENST00000553527 LARP1Q6PKG0 1096 aaKnown RBP32.93■■■□□ 2.86
TDP1-205ENST00000553527 NINLQ9Y2I6 1382 aa32.93■■■□□ 2.86
TDP1-205ENST00000553527 EDC4Q6P2E9 1401 aaKnown RBP32.93■■■□□ 2.86
TDP1-205ENST00000553527 LMO7Q8WWI1 1683 aa32.92■■■□□ 2.86
TDP1-205ENST00000553527 SPATA31A1Q5TZJ5 1347 aa32.91■■■□□ 2.86
TDP1-205ENST00000553527 EIF4G2P78344 907 aaKnown RBP eCLIP32.89■■■□□ 2.86
TDP1-205ENST00000553527 POLR3GLQ9BT43 218 aa32.89■■■□□ 2.86
TDP1-205ENST00000553527 KRT27Q7Z3Y8 459 aa32.88■■■□□ 2.85
TDP1-205ENST00000553527 ARHGEF25Q86VW2 580 aa32.88■■■□□ 2.85
TDP1-205ENST00000553527 RGPD5Q99666 1765 aa32.88■■■□□ 2.85
TDP1-205ENST00000553527 EP400Q96L91 3159 aa32.87■■■□□ 2.85
TDP1-205ENST00000553527 HSPA5P11021 654 aaKnown RBP32.87■■■□□ 2.85
TDP1-205ENST00000553527 AATKQ6ZMQ8 1374 aa32.86■■■□□ 2.85
TDP1-205ENST00000553527 USP31Q70CQ4 1352 aa32.86■■■□□ 2.85
TDP1-205ENST00000553527 AXIN2Q9Y2T1 843 aa32.86■■■□□ 2.85
TDP1-205ENST00000553527 COL18A1P39060 1754 aa32.85■■■□□ 2.85
TDP1-205ENST00000553527 ANKRD36BQ8N2N9 1353 aa32.84■■■□□ 2.85
TDP1-205ENST00000553527 COL5A2P05997 1499 aaPredicted RBP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms