RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C14orf93Q9H972 538 aaKnown RBP9.96□□□□□ -0.82
ATXN3-221ENST00000553498 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
ATXN3-221ENST00000553498 PIK3C2GO75747 1445 aa9.96□□□□□ -0.82
ATXN3-221ENST00000553498 SETBP1Q9Y6X0 1596 aa9.96□□□□□ -0.82
ATXN3-221ENST00000553498 PLPP6Q8IY26 295 aa9.95□□□□□ -0.82
ATXN3-221ENST00000553498 PUS7Q96PZ0 661 aaKnown RBP9.95□□□□□ -0.82
ATXN3-221ENST00000553498 ARHGEF40Q8TER5 1519 aa9.95□□□□□ -0.82
ATXN3-221ENST00000553498 PIK3C2BO00750 1634 aa9.95□□□□□ -0.82
ATXN3-221ENST00000553498 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
ATXN3-221ENST00000553498 PDE4AP27815 886 aa9.94□□□□□ -0.82
ATXN3-221ENST00000553498 MFSD10Q14728 455 aa9.94□□□□□ -0.82
ATXN3-221ENST00000553498 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
ATXN3-221ENST00000553498 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
ATXN3-221ENST00000553498 UGGT1Q9NYU2 1555 aa9.93□□□□□ -0.82
ATXN3-221ENST00000553498 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
ATXN3-221ENST00000553498 MRS2Q9HD23 443 aa9.93□□□□□ -0.82
ATXN3-221ENST00000553498 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
ATXN3-221ENST00000553498 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-221ENST00000553498 DISP3Q9P2K9 1392 aa9.92□□□□□ -0.82
ATXN3-221ENST00000553498 MYBBP1AQ9BQG0 1328 aaKnown RBP9.92□□□□□ -0.82
ATXN3-221ENST00000553498 IDI1Q13907 227 aa9.92□□□□□ -0.82
ATXN3-221ENST00000553498 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
ATXN3-221ENST00000553498 POLR3GLQ9BT43 218 aa9.92□□□□□ -0.82
ATXN3-221ENST00000553498 SYNMO15061 1565 aa9.92□□□□□ -0.82
ATXN3-221ENST00000553498 INSRP06213 1382 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 IQGAP1P46940 1657 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 PER1O15534 1290 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-221ENST00000553498 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
ATXN3-221ENST00000553498 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
ATXN3-221ENST00000553498 KIF1BO60333 1816 aa9.91□□□□□ -0.82
ATXN3-221ENST00000553498 PARD3Q8TEW0 1356 aa9.9□□□□□ -0.82
ATXN3-221ENST00000553498 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
ATXN3-221ENST00000553498 PPP1R15BQ5SWA1 713 aa9.9□□□□□ -0.82
ATXN3-221ENST00000553498 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
ATXN3-221ENST00000553498 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
ATXN3-221ENST00000553498 PTCD2Q8WV60 388 aaKnown RBP9.9□□□□□ -0.82
ATXN3-221ENST00000553498 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATXN3-221ENST00000553498 IFT172Q9UG01 1749 aa9.9□□□□□ -0.83
ATXN3-221ENST00000553498 SPATA31D1Q6ZQQ2 1576 aa9.89□□□□□ -0.83
ATXN3-221ENST00000553498 CENPJQ9HC77 1338 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-221ENST00000553498 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
ATXN3-221ENST00000553498 HDGFP51858 240 aaKnown RBP9.89□□□□□ -0.83
ATXN3-221ENST00000553498 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
ATXN3-221ENST00000553498 ADGRB1O14514 1584 aa9.88□□□□□ -0.83
ATXN3-221ENST00000553498 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
ATXN3-221ENST00000553498 EMP3P54852 163 aa9.88□□□□□ -0.83
ATXN3-221ENST00000553498 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATXN3-221ENST00000553498 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
ATXN3-221ENST00000553498 PANK3Q9H999 370 aa9.88□□□□□ -0.83
ATXN3-221ENST00000553498 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
ATXN3-221ENST00000553498 ZBED9Q6R2W3 1325 aa9.87□□□□□ -0.83
ATXN3-221ENST00000553498 MYO3AQ8NEV4 1616 aa9.87□□□□□ -0.83
ATXN3-221ENST00000553498 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATXN3-221ENST00000553498 KNSTRNQ9Y448 316 aa9.87□□□□□ -0.83
ATXN3-221ENST00000553498 ZMYM3Q14202 1370 aa9.87□□□□□ -0.83
ATXN3-221ENST00000553498 PNISRQ8TF01 805 aaKnown RBP9.86□□□□□ -0.83
ATXN3-221ENST00000553498 MROH2AA6NES4 1674 aa9.86□□□□□ -0.83
ATXN3-221ENST00000553498 PREX1Q8TCU6 1659 aa9.86□□□□□ -0.83
ATXN3-221ENST00000553498 NINLQ9Y2I6 1382 aa9.86□□□□□ -0.83
ATXN3-221ENST00000553498 TMEM131LA2VDJ0 1609 aa9.85□□□□□ -0.83
ATXN3-221ENST00000553498 KIF13AQ9H1H9 1805 aa9.85□□□□□ -0.83
ATXN3-221ENST00000553498 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
ATXN3-221ENST00000553498 PPLO60437 1756 aa9.84□□□□□ -0.83
ATXN3-221ENST00000553498 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-221ENST00000553498 HS3ST6Q96QI5 342 aa9.84□□□□□ -0.83
ATXN3-221ENST00000553498 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
ATXN3-221ENST00000553498 SIGLEC1Q9BZZ2 1709 aa9.84□□□□□ -0.83
ATXN3-221ENST00000553498 A2ML1A8K2U0 1454 aa9.84□□□□□ -0.83
ATXN3-221ENST00000553498 EVC2Q86UK5 1308 aa9.83□□□□□ -0.84
ATXN3-221ENST00000553498 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
ATXN3-221ENST00000553498 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
ATXN3-221ENST00000553498 TSHZ2Q9NRE2 1034 aa9.83□□□□□ -0.84
ATXN3-221ENST00000553498 NUDT7P0C024 238 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 CAMK2BQ13554 666 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 CCDC184Q52MB2 194 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 SIRT1Q96EB6 747 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 TNRQ92752 1358 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
ATXN3-221ENST00000553498 NEFLP07196 543 aa9.81□□□□□ -0.84
ATXN3-221ENST00000553498 ERICH6BQ5W0A0 696 aa9.81□□□□□ -0.84
ATXN3-221ENST00000553498 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
ATXN3-221ENST00000553498 TRAK1Q9UPV9 953 aa9.81□□□□□ -0.84
ATXN3-221ENST00000553498 RIMS2Q9UQ26 1411 aa9.81□□□□□ -0.84
ATXN3-221ENST00000553498 NSD2O96028 1365 aa9.8□□□□□ -0.84
ATXN3-221ENST00000553498 MLECQ14165 292 aa9.8□□□□□ -0.84
ATXN3-221ENST00000553498 YTHDC2Q9H6S0 1430 aaKnown RBP9.8□□□□□ -0.84
ATXN3-221ENST00000553498 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
ATXN3-221ENST00000553498 ERBB3P21860 1342 aa9.8□□□□□ -0.84
ATXN3-221ENST00000553498 TSPOAP1O95153 1857 aa9.79□□□□□ -0.84
ATXN3-221ENST00000553498 ATAD2Q6PL18 1390 aa9.79□□□□□ -0.84
ATXN3-221ENST00000553498 DLC1Q96QB1 1528 aa9.79□□□□□ -0.84
ATXN3-221ENST00000553498 TMEM132EQ6IEE7 984 aa9.79□□□□□ -0.84
ATXN3-221ENST00000553498 ABCC11Q96J66 1382 aa9.78□□□□□ -0.84
ATXN3-221ENST00000553498 CLTCQ00610 1675 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms