RNA–Protein interactions for RNA: ENST00000552997.1

USP15-219, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 4

Gene USP15, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-219ENST00000552997 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
USP15-219ENST00000552997 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
USP15-219ENST00000552997 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
USP15-219ENST00000552997 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
USP15-219ENST00000552997 LILRB3O75022 631 aa8.23□□□□□ -1.09
USP15-219ENST00000552997 QPCTQ16769 361 aa8.22□□□□□ -1.09
USP15-219ENST00000552997 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
USP15-219ENST00000552997 MAP10Q9P2G4 905 aa8.22□□□□□ -1.09
USP15-219ENST00000552997 TLL2Q9Y6L7 1015 aa8.22□□□□□ -1.09
USP15-219ENST00000552997 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
USP15-219ENST00000552997 PLEKHG3A1L390 1219 aa8.21□□□□□ -1.1
USP15-219ENST00000552997 CTHP32929 405 aa8.21□□□□□ -1.1
USP15-219ENST00000552997 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.1
USP15-219ENST00000552997 SNRPBP14678 240 aaKnown RBP8.2□□□□□ -1.1
USP15-219ENST00000552997 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
USP15-219ENST00000552997 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
USP15-219ENST00000552997 FAM174AQ8TBP5 190 aa8.19□□□□□ -1.1
USP15-219ENST00000552997 RSPH6AQ9H0K4 717 aa8.19□□□□□ -1.1
USP15-219ENST00000552997 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
USP15-219ENST00000552997 NFX1Q12986 1120 aaKnown RBP8.18□□□□□ -1.1
USP15-219ENST00000552997 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
USP15-219ENST00000552997 WFS1O76024 890 aa8.17□□□□□ -1.1
USP15-219ENST00000552997 ADH1CP00326 375 aa8.17□□□□□ -1.1
USP15-219ENST00000552997 NNTQ13423 1086 aa8.17□□□□□ -1.1
USP15-219ENST00000552997 TRIM46Q7Z4K8 759 aa8.17□□□□□ -1.1
USP15-219ENST00000552997 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
USP15-219ENST00000552997 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
USP15-219ENST00000552997 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
USP15-219ENST00000552997 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
USP15-219ENST00000552997 BMP1P13497 986 aa8.16□□□□□ -1.1
USP15-219ENST00000552997 NUTM2DQ5VT03 806 aaPredicted RBP8.16□□□□□ -1.1
USP15-219ENST00000552997 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
USP15-219ENST00000552997 FOXJ1Q92949 421 aa8.16□□□□□ -1.1
USP15-219ENST00000552997 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
USP15-219ENST00000552997 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
USP15-219ENST00000552997 RTL5Q5HYW3 569 aaPredicted RBP8.15□□□□□ -1.1
USP15-219ENST00000552997 NBPF14Q5TI25 921 aa8.15□□□□□ -1.1
USP15-219ENST00000552997 BPHLQ86WA6 291 aaPredicted RBP8.15□□□□□ -1.1
USP15-219ENST00000552997 TIMP2P16035 220 aa8.14□□□□□ -1.11
USP15-219ENST00000552997 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
USP15-219ENST00000552997 SH3RF1Q7Z6J0 888 aa8.14□□□□□ -1.11
USP15-219ENST00000552997 KLF16Q9BXK1 252 aaPredicted RBP8.14□□□□□ -1.11
USP15-219ENST00000552997 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
USP15-219ENST00000552997 WIPF1O43516 503 aa8.13□□□□□ -1.11
USP15-219ENST00000552997 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.112e-16■□□□□ 9
USP15-219ENST00000552997 BCANQ96GW7 911 aa8.13□□□□□ -1.11
USP15-219ENST00000552997 NR5A1Q13285 461 aa8.12□□□□□ -1.11
USP15-219ENST00000552997 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
USP15-219ENST00000552997 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
USP15-219ENST00000552997 TSC1Q92574 1164 aa8.12□□□□□ -1.11
USP15-219ENST00000552997 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
USP15-219ENST00000552997 SKIV2LQ15477 1246 aaKnown RBP8.11□□□□□ -1.11
USP15-219ENST00000552997 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
USP15-219ENST00000552997 DDRGK1Q96HY6 314 aa8.11□□□□□ -1.11
USP15-219ENST00000552997 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
USP15-219ENST00000552997 POLR3EQ9NVU0 708 aa8.11□□□□□ -1.11
USP15-219ENST00000552997 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
USP15-219ENST00000552997 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
USP15-219ENST00000552997 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP15-219ENST00000552997 NR3C2P08235 984 aa8.09□□□□□ -1.11
USP15-219ENST00000552997 GRM5P41594 1212 aa8.09□□□□□ -1.11
USP15-219ENST00000552997 AGERQ15109 404 aa8.09□□□□□ -1.11
USP15-219ENST00000552997 PPP2R2DQ66LE6 453 aa8.09□□□□□ -1.11
USP15-219ENST00000552997 NPAS3Q8IXF0 933 aa8.09□□□□□ -1.11
USP15-219ENST00000552997 GPBP1L1Q9HC44 474 aaPredicted RBP8.09□□□□□ -1.11
USP15-219ENST00000552997 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
USP15-219ENST00000552997 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
USP15-219ENST00000552997 NXF1Q9UBU9 619 aaKnown RBP8.07□□□□□ -1.12
USP15-219ENST00000552997 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
USP15-219ENST00000552997 ZIC2O95409 532 aaPredicted RBP8.06□□□□□ -1.12
USP15-219ENST00000552997 CTDSPL2Q05D32 466 aa8.06□□□□□ -1.12
USP15-219ENST00000552997 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
USP15-219ENST00000552997 FBXO31Q5XUX0 539 aaPredicted RBP8.06□□□□□ -1.12
USP15-219ENST00000552997 ITPKCQ96DU7 683 aa8.06□□□□□ -1.12
USP15-219ENST00000552997 FSHRP23945 695 aa8.05□□□□□ -1.12
USP15-219ENST00000552997 SCARF1Q14162 830 aa8.05□□□□□ -1.12
USP15-219ENST00000552997 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
USP15-219ENST00000552997 H3BM21 787 aa8.04□□□□□ -1.12
USP15-219ENST00000552997 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
USP15-219ENST00000552997 PDXDC2PQ6P474 469 aa8.04□□□□□ -1.12
USP15-219ENST00000552997 MEIOBQ8N635 442 aa8.04□□□□□ -1.12
USP15-219ENST00000552997 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
USP15-219ENST00000552997 MAGEB6P1A0A0J9YX57 407 aa8.03□□□□□ -1.12
USP15-219ENST00000552997 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
USP15-219ENST00000552997 INSM1Q01101 510 aaPredicted RBP8.03□□□□□ -1.12
USP15-219ENST00000552997 PROCA1Q8NCQ7 364 aaPredicted RBP8.03□□□□□ -1.12
USP15-219ENST00000552997 SLC16A10Q8TF71 515 aa8.03□□□□□ -1.12
USP15-219ENST00000552997 LRRN4Q8WUT4 740 aa8.03□□□□□ -1.12
USP15-219ENST00000552997 PURBQ96QR8 312 aaKnown RBP8.03□□□□□ -1.12
USP15-219ENST00000552997 VASH1Q7L8A9 365 aaPredicted RBP8.02□□□□□ -1.13
USP15-219ENST00000552997 STK17AQ9UEE5 414 aa8.02□□□□□ -1.13
USP15-219ENST00000552997 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
USP15-219ENST00000552997 LINC00528Q8N1L1 170 aa8.01□□□□□ -1.13
USP15-219ENST00000552997 CARD14Q9BXL6 1004 aa8.01□□□□□ -1.13
USP15-219ENST00000552997 CDV3Q9UKY7 258 aaKnown RBP8.01□□□□□ -1.13
USP15-219ENST00000552997 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
USP15-219ENST00000552997 EMILIN1Q9Y6C2 1016 aa8.01□□□□□ -1.13
USP15-219ENST00000552997 IRF7Q92985 503 aa8□□□□□ -1.13
USP15-219ENST00000552997 ARHGAP9Q9BRR9 750 aa8□□□□□ -1.13
USP15-219ENST00000552997 GOPCQ9HD26 462 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms