RNA–Protein interactions for RNA: ENST00000552989.5

PFKM-230, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-230ENST00000552989 ARHGEF10O15013 1369 aa12.75□□□□□ -0.37
PFKM-230ENST00000552989 GLI3P10071 1580 aa12.75□□□□□ -0.37
PFKM-230ENST00000552989 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
PFKM-230ENST00000552989 USP47Q96K76 1375 aa12.75□□□□□ -0.37
PFKM-230ENST00000552989 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
PFKM-230ENST00000552989 EP400Q96L91 3159 aa12.74□□□□□ -0.37
PFKM-230ENST00000552989 POLR3AO14802 1390 aaPredicted RBP12.74□□□□□ -0.37
PFKM-230ENST00000552989 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
PFKM-230ENST00000552989 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
PFKM-230ENST00000552989 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
PFKM-230ENST00000552989 ACEP12821 1306 aa12.72□□□□□ -0.37
PFKM-230ENST00000552989 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
PFKM-230ENST00000552989 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
PFKM-230ENST00000552989 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
PFKM-230ENST00000552989 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
PFKM-230ENST00000552989 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
PFKM-230ENST00000552989 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
PFKM-230ENST00000552989 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
PFKM-230ENST00000552989 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
PFKM-230ENST00000552989 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
PFKM-230ENST00000552989 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
PFKM-230ENST00000552989 NUTM2GQ5VZR2 741 aa12.7□□□□□ -0.38
PFKM-230ENST00000552989 UNC5CLQ8IV45 518 aa12.7□□□□□ -0.38
PFKM-230ENST00000552989 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
PFKM-230ENST00000552989 NWD2Q9ULI1 1742 aa12.7□□□□□ -0.38
PFKM-230ENST00000552989 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
PFKM-230ENST00000552989 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
PFKM-230ENST00000552989 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
PFKM-230ENST00000552989 POLR3GLQ9BT43 218 aa12.68□□□□□ -0.38
PFKM-230ENST00000552989 COL14A1Q05707 1796 aaKnown RBP12.68□□□□□ -0.38
PFKM-230ENST00000552989 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
PFKM-230ENST00000552989 CABP1Q9NZU7 370 aa12.67□□□□□ -0.38
PFKM-230ENST00000552989 BRWD3Q6RI45 1802 aa12.66□□□□□ -0.38
PFKM-230ENST00000552989 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
PFKM-230ENST00000552989 USP6P35125 1406 aa12.65□□□□□ -0.38
PFKM-230ENST00000552989 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
PFKM-230ENST00000552989 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
PFKM-230ENST00000552989 VPS72Q15906 364 aa12.65□□□□□ -0.38
PFKM-230ENST00000552989 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
PFKM-230ENST00000552989 USP19O94966 1318 aa12.64□□□□□ -0.39
PFKM-230ENST00000552989 EVC2Q86UK5 1308 aa12.64□□□□□ -0.39
PFKM-230ENST00000552989 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
PFKM-230ENST00000552989 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
PFKM-230ENST00000552989 TESK2Q96S53 571 aa12.64□□□□□ -0.39
PFKM-230ENST00000552989 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
PFKM-230ENST00000552989 SBNO2Q9Y2G9 1366 aa12.63□□□□□ -0.39
PFKM-230ENST00000552989 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
PFKM-230ENST00000552989 CD163L1Q9NR16 1453 aa12.62□□□□□ -0.39
PFKM-230ENST00000552989 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
PFKM-230ENST00000552989 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
PFKM-230ENST00000552989 PRDM11Q9NQV5 511 aa12.62□□□□□ -0.39
PFKM-230ENST00000552989 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
PFKM-230ENST00000552989 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
PFKM-230ENST00000552989 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
PFKM-230ENST00000552989 SLIT3O75094 1523 aa12.61□□□□□ -0.39
PFKM-230ENST00000552989 KIF7Q2M1P5 1343 aa12.61□□□□□ -0.39
PFKM-230ENST00000552989 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
PFKM-230ENST00000552989 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
PFKM-230ENST00000552989 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
PFKM-230ENST00000552989 THSD7AQ9UPZ6 1657 aa12.6□□□□□ -0.39
PFKM-230ENST00000552989 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
PFKM-230ENST00000552989 CCDC7Q96M83 1385 aa12.59□□□□□ -0.39
PFKM-230ENST00000552989 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
PFKM-230ENST00000552989 TMF1P82094 1093 aa12.59□□□□□ -0.39
PFKM-230ENST00000552989 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
PFKM-230ENST00000552989 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
PFKM-230ENST00000552989 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
PFKM-230ENST00000552989 CPDO75976 1380 aa12.58□□□□□ -0.4
PFKM-230ENST00000552989 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.4
PFKM-230ENST00000552989 BRD4O60885 1362 aaPredicted RBP12.57□□□□□ -0.4
PFKM-230ENST00000552989 COL18A1P39060 1754 aa12.57□□□□□ -0.4
PFKM-230ENST00000552989 GCP02774 474 aa12.57□□□□□ -0.4
PFKM-230ENST00000552989 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
PFKM-230ENST00000552989 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
PFKM-230ENST00000552989 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
PFKM-230ENST00000552989 NLRP6P59044 892 aa12.56□□□□□ -0.4
PFKM-230ENST00000552989 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
PFKM-230ENST00000552989 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
PFKM-230ENST00000552989 NFAT5O94916 1531 aa12.56□□□□□ -0.4
PFKM-230ENST00000552989 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
PFKM-230ENST00000552989 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
PFKM-230ENST00000552989 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
PFKM-230ENST00000552989 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
PFKM-230ENST00000552989 SLC12A5Q9H2X9 1139 aa12.55□□□□□ -0.4
PFKM-230ENST00000552989 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
PFKM-230ENST00000552989 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
PFKM-230ENST00000552989 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
PFKM-230ENST00000552989 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
PFKM-230ENST00000552989 A0A0G2JS52 829 aa12.53□□□□□ -0.4
PFKM-230ENST00000552989 SOX12O15370 315 aa12.53□□□□□ -0.4
PFKM-230ENST00000552989 MYT1Q01538 1121 aa12.53□□□□□ -0.4
PFKM-230ENST00000552989 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
PFKM-230ENST00000552989 NME9Q86XW9 330 aa12.53□□□□□ -0.4
PFKM-230ENST00000552989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
PFKM-230ENST00000552989 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
PFKM-230ENST00000552989 RGPD5Q99666 1765 aa12.52□□□□□ -0.41
PFKM-230ENST00000552989 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
PFKM-230ENST00000552989 AXIN2Q9Y2T1 843 aa12.52□□□□□ -0.41
PFKM-230ENST00000552989 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
PFKM-230ENST00000552989 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms