RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
LINC00661-206ENST00000552608 CADPS2Q86UW7 1296 aa14.69□□□□□ -0.06
LINC00661-206ENST00000552608 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
LINC00661-206ENST00000552608 GGNBP2Q9H3C7 697 aa14.69□□□□□ -0.06
LINC00661-206ENST00000552608 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
LINC00661-206ENST00000552608 TTC21BQ7Z4L5 1316 aa14.68□□□□□ -0.06
LINC00661-206ENST00000552608 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
LINC00661-206ENST00000552608 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
LINC00661-206ENST00000552608 COG3Q96JB2 828 aa14.68□□□□□ -0.06
LINC00661-206ENST00000552608 ZNF335Q9H4Z2 1342 aaPredicted RBP14.67□□□□□ -0.06
LINC00661-206ENST00000552608 PNISRQ8TF01 805 aaKnown RBP14.67□□□□□ -0.06
LINC00661-206ENST00000552608 MAP2P11137 1827 aaKnown RBP14.66□□□□□ -0.06
LINC00661-206ENST00000552608 USP54Q70EL1 1684 aa14.66□□□□□ -0.06
LINC00661-206ENST00000552608 C1orf167Q5SNV9 1468 aa14.66□□□□□ -0.06
LINC00661-206ENST00000552608 INSRP06213 1382 aa14.66□□□□□ -0.06
LINC00661-206ENST00000552608 WDR43Q15061 677 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00661-206ENST00000552608 MST1RQ04912 1400 aa14.66□□□□□ -0.06
LINC00661-206ENST00000552608 SSH2Q76I76 1423 aa14.66□□□□□ -0.06
LINC00661-206ENST00000552608 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
LINC00661-206ENST00000552608 NME9Q86XW9 330 aa14.64□□□□□ -0.07
LINC00661-206ENST00000552608 AATKQ6ZMQ8 1374 aa14.63□□□□□ -0.07
LINC00661-206ENST00000552608 PIK3C2AO00443 1686 aa14.63□□□□□ -0.07
LINC00661-206ENST00000552608 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC00661-206ENST00000552608 PSME1Q06323 249 aa14.63□□□□□ -0.07
LINC00661-206ENST00000552608 USP31Q70CQ4 1352 aa14.62□□□□□ -0.07
LINC00661-206ENST00000552608 OVOS2A0A0J9YW53 1432 aa14.62□□□□□ -0.07
LINC00661-206ENST00000552608 OVOS2Q6IE36 1432 aa14.62□□□□□ -0.07
LINC00661-206ENST00000552608 MTHFSP49914 203 aa14.61□□□□□ -0.07
LINC00661-206ENST00000552608 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
LINC00661-206ENST00000552608 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
LINC00661-206ENST00000552608 ORAI2Q96SN7 254 aa14.6□□□□□ -0.07
LINC00661-206ENST00000552608 TRPM3Q9HCF6 1732 aaPredicted RBP14.59□□□□□ -0.07
LINC00661-206ENST00000552608 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
LINC00661-206ENST00000552608 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.07
LINC00661-206ENST00000552608 ABTB2Q8N961 1025 aa14.58□□□□□ -0.08
LINC00661-206ENST00000552608 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
LINC00661-206ENST00000552608 BLMP54132 1417 aaPredicted RBP14.58□□□□□ -0.08
LINC00661-206ENST00000552608 CDK12Q9NYV4 1490 aaPredicted RBP14.57□□□□□ -0.08
LINC00661-206ENST00000552608 NLRP6P59044 892 aa14.57□□□□□ -0.08
LINC00661-206ENST00000552608 NPHP3Q7Z494 1330 aa14.57□□□□□ -0.08
LINC00661-206ENST00000552608 LTBP4Q8N2S1 1624 aa14.56□□□□□ -0.08
LINC00661-206ENST00000552608 FOXO3O43524 673 aa14.56□□□□□ -0.08
LINC00661-206ENST00000552608 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
LINC00661-206ENST00000552608 ZRANB1Q9UGI0 708 aa14.56□□□□□ -0.08
LINC00661-206ENST00000552608 ZBED9Q6R2W3 1325 aa14.56□□□□□ -0.08
LINC00661-206ENST00000552608 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
LINC00661-206ENST00000552608 ALS2Q96Q42 1657 aa14.55□□□□□ -0.08
LINC00661-206ENST00000552608 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
LINC00661-206ENST00000552608 PNNQ9H307 717 aaKnown RBP14.54□□□□□ -0.08
LINC00661-206ENST00000552608 SLAIN2Q9P270 581 aa14.54□□□□□ -0.08
LINC00661-206ENST00000552608 ADAMTS8Q9UP79 889 aa14.54□□□□□ -0.08
LINC00661-206ENST00000552608 PNPLA6Q8IY17 1366 aa14.54□□□□□ -0.08
LINC00661-206ENST00000552608 COL3A1P02461 1466 aaPredicted RBP14.54□□□□□ -0.08
LINC00661-206ENST00000552608 LTN1O94822 1766 aa14.53□□□□□ -0.08
LINC00661-206ENST00000552608 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
LINC00661-206ENST00000552608 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
LINC00661-206ENST00000552608 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
LINC00661-206ENST00000552608 KCNH5Q8NCM2 988 aa14.53□□□□□ -0.08
LINC00661-206ENST00000552608 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.08
LINC00661-206ENST00000552608 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.09
LINC00661-206ENST00000552608 BRINP3Q76B58 766 aa14.51□□□□□ -0.09
LINC00661-206ENST00000552608 SLIT3O75094 1523 aa14.51□□□□□ -0.09
LINC00661-206ENST00000552608 FLT4P35916 1363 aa14.5□□□□□ -0.09
LINC00661-206ENST00000552608 U2SURPO15042 1029 aaKnown RBP14.5□□□□□ -0.09
LINC00661-206ENST00000552608 U2AF1L5P0DN76 240 aaPredicted RBP14.5□□□□□ -0.09
LINC00661-206ENST00000552608 U2AF1Q01081 240 aaKnown RBP eCLIP14.5□□□□□ -0.09
LINC00661-206ENST00000552608 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
LINC00661-206ENST00000552608 LMOD2Q6P5Q4 547 aa14.5□□□□□ -0.09
LINC00661-206ENST00000552608 NGEFQ8N5V2 710 aa14.5□□□□□ -0.09
LINC00661-206ENST00000552608 PXDNQ92626 1479 aa14.5□□□□□ -0.09
LINC00661-206ENST00000552608 TNS3Q68CZ2 1445 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 RTL1A6NKG5 1358 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 NEFMP07197 916 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 AMPHP49418 695 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
LINC00661-206ENST00000552608 NUTM2GQ5VZR2 741 aa14.49□□□□□ -0.09
LINC00661-206ENST00000552608 PHRF1Q9P1Y6 1649 aaKnown RBP14.48□□□□□ -0.09
LINC00661-206ENST00000552608 SOX12O15370 315 aa14.48□□□□□ -0.09
LINC00661-206ENST00000552608 RUNDC1Q96C34 613 aa14.48□□□□□ -0.09
LINC00661-206ENST00000552608 NFAT5O94916 1531 aa14.47□□□□□ -0.09
LINC00661-206ENST00000552608 FBLN1P23142 703 aa14.47□□□□□ -0.09
LINC00661-206ENST00000552608 USP19O94966 1318 aa14.46□□□□□ -0.09
LINC00661-206ENST00000552608 MAP3K19Q56UN5 1328 aa14.46□□□□□ -0.09
LINC00661-206ENST00000552608 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
LINC00661-206ENST00000552608 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.09
LINC00661-206ENST00000552608 IQSEC2Q5JU85 1478 aa14.46□□□□□ -0.09
LINC00661-206ENST00000552608 PDE3BQ13370 1112 aa14.46□□□□□ -0.09
LINC00661-206ENST00000552608 MED1Q15648 1581 aaPredicted RBP14.46□□□□□ -0.09
LINC00661-206ENST00000552608 SPATA31A3Q5VYP0 1347 aa14.45□□□□□ -0.1
LINC00661-206ENST00000552608 CCDC146Q8IYE0 955 aa14.45□□□□□ -0.1
LINC00661-206ENST00000552608 SOS2Q07890 1332 aaPredicted RBP14.44□□□□□ -0.1
LINC00661-206ENST00000552608 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
LINC00661-206ENST00000552608 FCHSD2O94868 740 aa14.44□□□□□ -0.1
LINC00661-206ENST00000552608 IL13P35225 146 aa14.44□□□□□ -0.1
LINC00661-206ENST00000552608 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
LINC00661-206ENST00000552608 GCP02774 474 aa14.43□□□□□ -0.1
LINC00661-206ENST00000552608 AHDC1Q5TGY3 1603 aaPredicted RBP14.43□□□□□ -0.1
LINC00661-206ENST00000552608 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms