RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ADGRB3O60242 1522 aa13.57□□□□□ -0.24
PRIM1-208ENST00000552590 C1QTNF8P60827 252 aa13.57□□□□□ -0.24
PRIM1-208ENST00000552590 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
PRIM1-208ENST00000552590 DCCP43146 1447 aa13.57□□□□□ -0.24
PRIM1-208ENST00000552590 BAG6P46379 1132 aa13.56□□□□□ -0.24
PRIM1-208ENST00000552590 ZFYVE9O95405 1425 aa13.55□□□□□ -0.24
PRIM1-208ENST00000552590 GLI3P10071 1580 aa13.54□□□□□ -0.24
PRIM1-208ENST00000552590 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
PRIM1-208ENST00000552590 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
PRIM1-208ENST00000552590 AMOTL2Q9Y2J4 779 aa13.54□□□□□ -0.24
PRIM1-208ENST00000552590 SEPT12Q8IYM1 358 aa13.53□□□□□ -0.24
PRIM1-208ENST00000552590 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
PRIM1-208ENST00000552590 RIMS2Q9UQ26 1411 aa13.53□□□□□ -0.24
PRIM1-208ENST00000552590 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
PRIM1-208ENST00000552590 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
PRIM1-208ENST00000552590 MYO5BQ9ULV0 1848 aa13.52□□□□□ -0.25
PRIM1-208ENST00000552590 SPHKAPQ2M3C7 1700 aa13.51□□□□□ -0.25
PRIM1-208ENST00000552590 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
PRIM1-208ENST00000552590 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
PRIM1-208ENST00000552590 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
PRIM1-208ENST00000552590 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
PRIM1-208ENST00000552590 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
PRIM1-208ENST00000552590 G3V3G9 751 aa13.49□□□□□ -0.25
PRIM1-208ENST00000552590 CEP162Q5TB80 1403 aa13.49□□□□□ -0.25
PRIM1-208ENST00000552590 HDGFP51858 240 aaKnown RBP13.48□□□□□ -0.25
PRIM1-208ENST00000552590 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
PRIM1-208ENST00000552590 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
PRIM1-208ENST00000552590 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
PRIM1-208ENST00000552590 TRPM2O94759 1503 aa13.48□□□□□ -0.25
PRIM1-208ENST00000552590 SLC52A1Q9NWF4 448 aa13.48□□□□□ -0.25
PRIM1-208ENST00000552590 NOS1P29475 1434 aa13.47□□□□□ -0.25
PRIM1-208ENST00000552590 MYOM2P54296 1465 aa13.47□□□□□ -0.25
PRIM1-208ENST00000552590 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
PRIM1-208ENST00000552590 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
PRIM1-208ENST00000552590 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
PRIM1-208ENST00000552590 PTGER2P43116 358 aa13.47□□□□□ -0.25
PRIM1-208ENST00000552590 PSEN1P49768 467 aa13.47□□□□□ -0.25
PRIM1-208ENST00000552590 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
PRIM1-208ENST00000552590 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.46□□□□□ -0.25
PRIM1-208ENST00000552590 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
PRIM1-208ENST00000552590 DUOX2Q9NRD8 1548 aa13.46□□□□□ -0.26
PRIM1-208ENST00000552590 ORAI2Q96SN7 254 aa13.45□□□□□ -0.26
PRIM1-208ENST00000552590 LAMC1P11047 1609 aa13.44□□□□□ -0.26
PRIM1-208ENST00000552590 ZNF687Q8N1G0 1237 aa13.44□□□□□ -0.26
PRIM1-208ENST00000552590 C1orf167Q5SNV9 1468 aa13.43□□□□□ -0.26
PRIM1-208ENST00000552590 KANK1Q14678 1352 aa13.43□□□□□ -0.26
PRIM1-208ENST00000552590 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
PRIM1-208ENST00000552590 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
PRIM1-208ENST00000552590 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRIM1-208ENST00000552590 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
PRIM1-208ENST00000552590 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
PRIM1-208ENST00000552590 SLIT2O94813 1529 aa13.41□□□□□ -0.26
PRIM1-208ENST00000552590 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
PRIM1-208ENST00000552590 ONECUT3O60422 494 aaPredicted RBP13.41□□□□□ -0.26
PRIM1-208ENST00000552590 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
PRIM1-208ENST00000552590 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
PRIM1-208ENST00000552590 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
PRIM1-208ENST00000552590 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
PRIM1-208ENST00000552590 GSE1Q14687 1217 aa13.4□□□□□ -0.26
PRIM1-208ENST00000552590 XRN1Q8IZH2 1706 aaKnown RBP13.4□□□□□ -0.26
PRIM1-208ENST00000552590 A0A0G2JS52 829 aa13.39□□□□□ -0.27
PRIM1-208ENST00000552590 CHRM1P11229 460 aaPredicted RBP13.39□□□□□ -0.27
PRIM1-208ENST00000552590 MYT1Q01538 1121 aa13.39□□□□□ -0.27
PRIM1-208ENST00000552590 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
PRIM1-208ENST00000552590 RRP7BPQ9NSQ0 103 aa13.39□□□□□ -0.27
PRIM1-208ENST00000552590 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
PRIM1-208ENST00000552590 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
PRIM1-208ENST00000552590 NALCNQ8IZF0 1738 aa13.39□□□□□ -0.27
PRIM1-208ENST00000552590 FKBP8Q14318 412 aa13.38□□□□□ -0.27
PRIM1-208ENST00000552590 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
PRIM1-208ENST00000552590 ERBINQ96RT1 1412 aa13.38□□□□□ -0.27
PRIM1-208ENST00000552590 VPS72Q15906 364 aa13.37□□□□□ -0.27
PRIM1-208ENST00000552590 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
PRIM1-208ENST00000552590 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
PRIM1-208ENST00000552590 RPRD2Q5VT52 1461 aaKnown RBP13.36□□□□□ -0.27
PRIM1-208ENST00000552590 KCNQ2O43526 872 aa13.36□□□□□ -0.27
PRIM1-208ENST00000552590 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
PRIM1-208ENST00000552590 CHD4Q14839 1912 aa13.35□□□□□ -0.27
PRIM1-208ENST00000552590 TNS1Q9HBL0 1735 aaKnown RBP13.34□□□□□ -0.27
PRIM1-208ENST00000552590 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
PRIM1-208ENST00000552590 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
PRIM1-208ENST00000552590 METP08581 1390 aa13.32□□□□□ -0.28
PRIM1-208ENST00000552590 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
PRIM1-208ENST00000552590 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
PRIM1-208ENST00000552590 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
PRIM1-208ENST00000552590 PXDNQ92626 1479 aa13.32□□□□□ -0.28
PRIM1-208ENST00000552590 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
PRIM1-208ENST00000552590 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
PRIM1-208ENST00000552590 FOXO3O43524 673 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 TRIM37O94972 964 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 NBPF8Q3BBV2 869 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 ANKRD13DQ6ZTN6 518 aa13.29□□□□□ -0.28
PRIM1-208ENST00000552590 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
PRIM1-208ENST00000552590 APBA3O96018 575 aa13.28□□□□□ -0.28
PRIM1-208ENST00000552590 PTPN23Q9H3S7 1636 aa13.27□□□□□ -0.28
PRIM1-208ENST00000552590 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
PRIM1-208ENST00000552590 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms