RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 METP08581 1390 aa14.18□□□□□ -0.14
TUBA1C-209ENST00000552448 APAF1O14727 1248 aa14.18□□□□□ -0.14
TUBA1C-209ENST00000552448 MINK1Q8N4C8 1332 aaPredicted RBP14.17□□□□□ -0.14
TUBA1C-209ENST00000552448 SRPK2P78362 688 aaKnown RBP14.17□□□□□ -0.14
TUBA1C-209ENST00000552448 A0A1W2PP64 1363 aa14.17□□□□□ -0.14
TUBA1C-209ENST00000552448 LTKP29376 864 aa14.16□□□□□ -0.14
TUBA1C-209ENST00000552448 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
TUBA1C-209ENST00000552448 SLFN5Q08AF3 891 aa14.16□□□□□ -0.14
TUBA1C-209ENST00000552448 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
TUBA1C-209ENST00000552448 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
TUBA1C-209ENST00000552448 CD163L1Q9NR16 1453 aa14.15□□□□□ -0.14
TUBA1C-209ENST00000552448 TBX22Q9Y458 520 aa14.15□□□□□ -0.14
TUBA1C-209ENST00000552448 KDM2BQ8NHM5 1336 aa14.14□□□□□ -0.15
TUBA1C-209ENST00000552448 MTHFSP49914 203 aa14.14□□□□□ -0.15
TUBA1C-209ENST00000552448 RRP9O43818 475 aaKnown RBP14.13□□□□□ -0.15
TUBA1C-209ENST00000552448 ADGRB2O60241 1585 aa14.13□□□□□ -0.15
TUBA1C-209ENST00000552448 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
TUBA1C-209ENST00000552448 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
TUBA1C-209ENST00000552448 PLIN1O60240 522 aa14.13□□□□□ -0.15
TUBA1C-209ENST00000552448 CDK19Q9BWU1 502 aa14.13□□□□□ -0.15
TUBA1C-209ENST00000552448 FRAT2O75474 233 aaPredicted RBP14.12□□□□□ -0.15
TUBA1C-209ENST00000552448 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
TUBA1C-209ENST00000552448 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
TUBA1C-209ENST00000552448 PTCH1Q13635 1447 aa14.11□□□□□ -0.15
TUBA1C-209ENST00000552448 WAPLQ7Z5K2 1190 aa14.11□□□□□ -0.15
TUBA1C-209ENST00000552448 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
TUBA1C-209ENST00000552448 ATP7BP35670 1465 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 E9PSI1 815 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 BECN1Q14457 450 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 RUNDC1Q96C34 613 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 CRBNQ96SW2 442 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 XRN1Q8IZH2 1706 aaKnown RBP14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 IQSEC2Q5JU85 1478 aa14.1□□□□□ -0.15
TUBA1C-209ENST00000552448 FYB1O15117 783 aa14.09□□□□□ -0.15
TUBA1C-209ENST00000552448 C8orf34Q49A92 452 aa14.09□□□□□ -0.15
TUBA1C-209ENST00000552448 ANKLE2Q86XL3 938 aa14.09□□□□□ -0.15
TUBA1C-209ENST00000552448 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
TUBA1C-209ENST00000552448 NKTRP30414 1462 aaKnown RBP14.09□□□□□ -0.15
TUBA1C-209ENST00000552448 WWC1Q8IX03 1113 aa14.08□□□□□ -0.15
TUBA1C-209ENST00000552448 GGNBP2Q9H3C7 697 aa14.08□□□□□ -0.15
TUBA1C-209ENST00000552448 CABP1Q9NZU7 370 aa14.08□□□□□ -0.15
TUBA1C-209ENST00000552448 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
TUBA1C-209ENST00000552448 HDGFL2Q7Z4V5 671 aaPredicted RBP14.08□□□□□ -0.16
TUBA1C-209ENST00000552448 ROBO2Q9HCK4 1378 aa14.08□□□□□ -0.16
TUBA1C-209ENST00000552448 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
TUBA1C-209ENST00000552448 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
TUBA1C-209ENST00000552448 PTPRUQ92729 1446 aa14.06□□□□□ -0.16
TUBA1C-209ENST00000552448 HSP90AA1P07900 732 aaKnown RBP14.06□□□□□ -0.16
TUBA1C-209ENST00000552448 CLCN1P35523 988 aa14.06□□□□□ -0.16
TUBA1C-209ENST00000552448 TCP11L2Q8N4U5 519 aa14.06□□□□□ -0.16
TUBA1C-209ENST00000552448 SLC26A8Q96RN1 970 aa14.06□□□□□ -0.16
TUBA1C-209ENST00000552448 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.06□□□□□ -0.16
TUBA1C-209ENST00000552448 COL3A1P02461 1466 aaPredicted RBP14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 CHD2O14647 1828 aaKnown RBP14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 SLC4A3P48751 1232 aa14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 HSP90AA2PQ14568 343 aaPredicted RBP14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 PNNQ9H307 717 aaKnown RBP14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 AMOTL2Q9Y2J4 779 aa14.05□□□□□ -0.16
TUBA1C-209ENST00000552448 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
TUBA1C-209ENST00000552448 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
TUBA1C-209ENST00000552448 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
TUBA1C-209ENST00000552448 TOPAZ1Q8N9V7 1692 aa14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 CDC42BPGQ6DT37 1551 aa14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 AKAP12Q02952 1782 aa14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.162e-9■■■□□ 17.5
TUBA1C-209ENST00000552448 RRAGDQ9NQL2 400 aaPredicted RBP14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 RRP7AQ9Y3A4 280 aaKnown RBP14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 PPIP5K1Q6PFW1 1433 aa14.03□□□□□ -0.16
TUBA1C-209ENST00000552448 NEUROD2Q15784 382 aa14.02□□□□□ -0.16
TUBA1C-209ENST00000552448 WDR63Q8IWG1 891 aa14.02□□□□□ -0.16
TUBA1C-209ENST00000552448 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.16
TUBA1C-209ENST00000552448 MON2Q7Z3U7 1717 aa14.02□□□□□ -0.17
TUBA1C-209ENST00000552448 CPSF1Q10570 1443 aaKnown RBP14.01□□□□□ -0.17
TUBA1C-209ENST00000552448 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
TUBA1C-209ENST00000552448 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
TUBA1C-209ENST00000552448 NUDT16Q96DE0 195 aaKnown RBP14.01□□□□□ -0.17
TUBA1C-209ENST00000552448 ZMYND15Q9H091 742 aa14.01□□□□□ -0.17
TUBA1C-209ENST00000552448 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
TUBA1C-209ENST00000552448 BCAR3O75815 825 aa14□□□□□ -0.17
TUBA1C-209ENST00000552448 GOLGA6L3A6NEY3 463 aa13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 PLEKHF1Q96S99 279 aa13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 MAPK8IP3Q9UPT6 1336 aa13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 NAP1L5Q96NT1 182 aaPredicted RBP13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
TUBA1C-209ENST00000552448 FSD2A1L4K1 749 aa13.97□□□□□ -0.17
TUBA1C-209ENST00000552448 U2SURPO15042 1029 aaKnown RBP13.97□□□□□ -0.17
TUBA1C-209ENST00000552448 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
TUBA1C-209ENST00000552448 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.17
TUBA1C-209ENST00000552448 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
TUBA1C-209ENST00000552448 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
TUBA1C-209ENST00000552448 POLKQ9UBT6 870 aa13.96□□□□□ -0.17
TUBA1C-209ENST00000552448 FMN2Q9NZ56 1722 aa13.96□□□□□ -0.18
TUBA1C-209ENST00000552448 KCNA6P17658 529 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms