RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 FKBPLQ9UIM3 349 aa8.98□□□□□ -0.97
R3HDM2-214ENST00000552428 ERBB3P21860 1342 aa8.98□□□□□ -0.97
R3HDM2-214ENST00000552428 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
R3HDM2-214ENST00000552428 FAM205CA6NFA0 338 aa8.96□□□□□ -0.98
R3HDM2-214ENST00000552428 FAM9AQ8IZU1 332 aaPredicted RBP8.96□□□□□ -0.98
R3HDM2-214ENST00000552428 PCDH10Q9P2E7 1040 aa8.96□□□□□ -0.98
R3HDM2-214ENST00000552428 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.98
R3HDM2-214ENST00000552428 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 E9PSI1 815 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 PIK3CDO00329 1044 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 F12P00748 615 aaPredicted RBP8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 PUS10Q3MIT2 529 aaKnown RBP8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 TMEM164Q5U3C3 297 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 USB1Q9BQ65 265 aaKnown RBP8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 NOVA2Q9UNW9 492 aaKnown RBP8.95□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
R3HDM2-214ENST00000552428 BHMG1C9JSJ3 638 aaPredicted RBP8.94□□□□□ -0.98
R3HDM2-214ENST00000552428 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
R3HDM2-214ENST00000552428 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
R3HDM2-214ENST00000552428 FAM196BA6NMK8 535 aa8.93□□□□□ -0.98
R3HDM2-214ENST00000552428 SKIP12755 728 aa8.93□□□□□ -0.98
R3HDM2-214ENST00000552428 VARS2Q5ST30 1063 aaKnown RBP8.93□□□□□ -0.98
R3HDM2-214ENST00000552428 RNF19BQ6ZMZ0 732 aa8.93□□□□□ -0.98
R3HDM2-214ENST00000552428 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
R3HDM2-214ENST00000552428 PTPRNQ16849 979 aa8.92□□□□□ -0.98
R3HDM2-214ENST00000552428 BLOC1S3Q6QNY0 202 aa8.92□□□□□ -0.98
R3HDM2-214ENST00000552428 TXNDC2Q86VQ3 553 aa8.92□□□□□ -0.98
R3HDM2-214ENST00000552428 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
R3HDM2-214ENST00000552428 HS3ST6Q96QI5 342 aa8.92□□□□□ -0.98
R3HDM2-214ENST00000552428 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
R3HDM2-214ENST00000552428 JUNDP17535 347 aa8.91□□□□□ -0.98
R3HDM2-214ENST00000552428 MCCD1P59942 119 aaPredicted RBP8.91□□□□□ -0.98
R3HDM2-214ENST00000552428 BRICD5Q6PL45 260 aa8.91□□□□□ -0.98
R3HDM2-214ENST00000552428 GPSM3Q9Y4H4 160 aa8.91□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L10C9JJH3 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L12C9JPN9 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L21D6R901 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 TK2O00142 265 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.9□□□□□ -0.98
R3HDM2-214ENST00000552428 LZTS3O60299 673 aaPredicted RBP8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 CDAN1Q8IWY9 1227 aa8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 GPKOWQ92917 476 aaPredicted RBP eCLIP8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 ANP32EQ9BTT0 268 aa8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 MAP10Q9P2G4 905 aa8.89□□□□□ -0.99
R3HDM2-214ENST00000552428 ATP5J2-PTCD1G3V325 749 aa8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 PHLDB3Q6NSJ2 640 aa8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 LARP1Q6PKG0 1096 aaKnown RBP8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 ARMC2Q8NEN0 867 aa8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 THAP11Q96EK4 314 aa8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 MKRN1Q9UHC7 482 aaKnown RBP8.88□□□□□ -0.99
R3HDM2-214ENST00000552428 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 SSFA2P28290 1259 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 PTK2Q05397 1052 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 PTK7Q13308 1070 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 SLFNL1Q499Z3 407 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 CRTC2Q53ET0 693 aaPredicted RBP8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 CLP1Q92989 425 aaKnown RBP8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 CEP126Q9P2H0 1117 aa8.87□□□□□ -0.99
R3HDM2-214ENST00000552428 NR1I2O75469 434 aa8.86□□□□□ -0.99
R3HDM2-214ENST00000552428 NCOA4Q13772 614 aa8.86□□□□□ -0.99
R3HDM2-214ENST00000552428 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
R3HDM2-214ENST00000552428 DEPDC4Q8N2C3 294 aa8.86□□□□□ -0.99
R3HDM2-214ENST00000552428 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 ERCC3P19447 782 aa8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 RASA1P20936 1047 aa8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 CTHP32929 405 aa8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 SCUBE3Q8IX30 993 aa8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
R3HDM2-214ENST00000552428 EIF5BO60841 1220 aaKnown RBP8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 FAM69CQ0P6D2 419 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 MAP7D1Q3KQU3 841 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 MSS51Q4VC12 460 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 NBPF14Q5TI25 921 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 PHTF2Q8N3S3 785 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 FAM200AQ8TCP9 573 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
R3HDM2-214ENST00000552428 CLSPNQ9HAW4 1339 aa8.83□□□□□ -1
R3HDM2-214ENST00000552428 RBM47A0AV96 593 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms