RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
TMEM116-215ENST00000552374 ATRNO75882 1429 aa15.47■□□□□ 0.07
TMEM116-215ENST00000552374 BTG4Q9NY30 223 aa15.47■□□□□ 0.07
TMEM116-215ENST00000552374 CDK12Q9NYV4 1490 aaPredicted RBP15.47■□□□□ 0.07
TMEM116-215ENST00000552374 ZC3H6P61129 1189 aaKnown RBP15.46■□□□□ 0.07
TMEM116-215ENST00000552374 PRDM11Q9NQV5 511 aa15.46■□□□□ 0.07
TMEM116-215ENST00000552374 RGS12O14924 1447 aa15.46■□□□□ 0.07
TMEM116-215ENST00000552374 SLIT2O94813 1529 aa15.45■□□□□ 0.06
TMEM116-215ENST00000552374 TRPM1Q7Z4N2 1603 aa15.44■□□□□ 0.06
TMEM116-215ENST00000552374 VPS72Q15906 364 aa15.44■□□□□ 0.06
TMEM116-215ENST00000552374 CHRNA2Q15822 529 aa15.43■□□□□ 0.06
TMEM116-215ENST00000552374 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
TMEM116-215ENST00000552374 NLRP6P59044 892 aa15.43■□□□□ 0.06
TMEM116-215ENST00000552374 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
TMEM116-215ENST00000552374 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
TMEM116-215ENST00000552374 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
TMEM116-215ENST00000552374 A0A0G2JS52 829 aa15.41■□□□□ 0.06
TMEM116-215ENST00000552374 MYT1Q01538 1121 aa15.41■□□□□ 0.06
TMEM116-215ENST00000552374 SEPT12Q8IYM1 358 aa15.41■□□□□ 0.06
TMEM116-215ENST00000552374 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
TMEM116-215ENST00000552374 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
TMEM116-215ENST00000552374 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
TMEM116-215ENST00000552374 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
TMEM116-215ENST00000552374 GCP02774 474 aa15.4■□□□□ 0.06
TMEM116-215ENST00000552374 EVA1CP58658 441 aa15.4■□□□□ 0.06
TMEM116-215ENST00000552374 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
TMEM116-215ENST00000552374 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
TMEM116-215ENST00000552374 QRICH2Q9H0J4 1663 aa15.39■□□□□ 0.05
TMEM116-215ENST00000552374 ATAD2Q6PL18 1390 aa15.39■□□□□ 0.05
TMEM116-215ENST00000552374 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
TMEM116-215ENST00000552374 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
TMEM116-215ENST00000552374 TTC21BQ7Z4L5 1316 aa15.38■□□□□ 0.05
TMEM116-215ENST00000552374 ITSN1Q15811 1721 aa15.38■□□□□ 0.05
TMEM116-215ENST00000552374 ALS2Q96Q42 1657 aa15.37■□□□□ 0.05
TMEM116-215ENST00000552374 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
TMEM116-215ENST00000552374 USP6P35125 1406 aa15.37■□□□□ 0.05
TMEM116-215ENST00000552374 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
TMEM116-215ENST00000552374 ONECUT3O60422 494 aaPredicted RBP15.36■□□□□ 0.05
TMEM116-215ENST00000552374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.36■□□□□ 0.05
TMEM116-215ENST00000552374 CLSPNQ9HAW4 1339 aa15.36■□□□□ 0.05
TMEM116-215ENST00000552374 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
TMEM116-215ENST00000552374 SOX12O15370 315 aa15.35■□□□□ 0.05
TMEM116-215ENST00000552374 HDGFL2Q7Z4V5 671 aaPredicted RBP15.35■□□□□ 0.05
TMEM116-215ENST00000552374 TESK2Q96S53 571 aa15.35■□□□□ 0.05
TMEM116-215ENST00000552374 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
TMEM116-215ENST00000552374 USP19O94966 1318 aa15.35■□□□□ 0.05
TMEM116-215ENST00000552374 SPATA31A5Q5VU36 1347 aa15.35■□□□□ 0.05
TMEM116-215ENST00000552374 SPATA31A7Q8IWB4 1347 aa15.35■□□□□ 0.05
TMEM116-215ENST00000552374 MARF1Q9Y4F3 1742 aaKnown RBP15.35■□□□□ 0.05
TMEM116-215ENST00000552374 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
TMEM116-215ENST00000552374 TOPAZ1Q8N9V7 1692 aa15.34■□□□□ 0.05
TMEM116-215ENST00000552374 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
TMEM116-215ENST00000552374 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
TMEM116-215ENST00000552374 PUS7Q96PZ0 661 aaKnown RBP15.33■□□□□ 0.04
TMEM116-215ENST00000552374 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
TMEM116-215ENST00000552374 LARP1Q6PKG0 1096 aaKnown RBP15.32■□□□□ 0.04
TMEM116-215ENST00000552374 TERF2IPQ9NYB0 399 aa15.32■□□□□ 0.04
TMEM116-215ENST00000552374 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
TMEM116-215ENST00000552374 TTC21AQ8NDW8 1320 aa15.32■□□□□ 0.04
TMEM116-215ENST00000552374 GLI3P10071 1580 aa15.31■□□□□ 0.04
TMEM116-215ENST00000552374 SPATA31A1Q5TZJ5 1347 aa15.31■□□□□ 0.04
TMEM116-215ENST00000552374 CPSF1Q10570 1443 aaKnown RBP15.31■□□□□ 0.04
TMEM116-215ENST00000552374 ABCA3Q99758 1704 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 TMF1P82094 1093 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 NME9Q86XW9 330 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 KCNH5Q8NCM2 988 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 CPDO75976 1380 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 USP47Q96K76 1375 aa15.3■□□□□ 0.04
TMEM116-215ENST00000552374 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
TMEM116-215ENST00000552374 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
TMEM116-215ENST00000552374 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.28■□□□□ 0.04
TMEM116-215ENST00000552374 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
TMEM116-215ENST00000552374 EP400Q96L91 3159 aa15.28■□□□□ 0.04
TMEM116-215ENST00000552374 SF3B2Q13435 895 aaKnown RBP15.27■□□□□ 0.04
TMEM116-215ENST00000552374 ARHGEF25Q86VW2 580 aa15.27■□□□□ 0.04
TMEM116-215ENST00000552374 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
TMEM116-215ENST00000552374 AXIN2Q9Y2T1 843 aa15.27■□□□□ 0.04
TMEM116-215ENST00000552374 NWD2Q9ULI1 1742 aa15.27■□□□□ 0.04
TMEM116-215ENST00000552374 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
TMEM116-215ENST00000552374 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
TMEM116-215ENST00000552374 A0A1W2PP64 1363 aa15.25■□□□□ 0.03
TMEM116-215ENST00000552374 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
TMEM116-215ENST00000552374 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
TMEM116-215ENST00000552374 PDE3BQ13370 1112 aa15.25■□□□□ 0.03
TMEM116-215ENST00000552374 CDCA8Q53HL2 280 aa15.25■□□□□ 0.03
TMEM116-215ENST00000552374 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
TMEM116-215ENST00000552374 CRYBG1Q9Y4K1 1723 aa15.24■□□□□ 0.03
TMEM116-215ENST00000552374 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
TMEM116-215ENST00000552374 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
TMEM116-215ENST00000552374 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
TMEM116-215ENST00000552374 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
TMEM116-215ENST00000552374 THRAP3Q9Y2W1 955 aaKnown RBP15.23■□□□□ 0.03
TMEM116-215ENST00000552374 NRAPQ86VF7 1730 aa15.22■□□□□ 0.03
TMEM116-215ENST00000552374 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
TMEM116-215ENST00000552374 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
TMEM116-215ENST00000552374 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
TMEM116-215ENST00000552374 NINLQ9Y2I6 1382 aa15.22■□□□□ 0.03
TMEM116-215ENST00000552374 BLMP54132 1417 aaPredicted RBP15.21■□□□□ 0.03
TMEM116-215ENST00000552374 COG3Q96JB2 828 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms