RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
CALCOCO1-220ENST00000552282 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
CALCOCO1-220ENST00000552282 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
CALCOCO1-220ENST00000552282 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
CALCOCO1-220ENST00000552282 NGDNQ8NEJ9 315 aaKnown RBP23.5■■□□□ 1.35
CALCOCO1-220ENST00000552282 NUDT16Q96DE0 195 aaKnown RBP23.5■■□□□ 1.35
CALCOCO1-220ENST00000552282 KRT27Q7Z3Y8 459 aa23.48■■□□□ 1.35
CALCOCO1-220ENST00000552282 BTG4Q9NY30 223 aa23.48■■□□□ 1.35
CALCOCO1-220ENST00000552282 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
CALCOCO1-220ENST00000552282 SPATA31A5Q5VU36 1347 aa23.47■■□□□ 1.35
CALCOCO1-220ENST00000552282 SPATA31A7Q8IWB4 1347 aa23.47■■□□□ 1.35
CALCOCO1-220ENST00000552282 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
CALCOCO1-220ENST00000552282 RGPD1P0DJD0 1748 aa23.45■■□□□ 1.34
CALCOCO1-220ENST00000552282 CCDC61Q9Y6R9 512 aa23.45■■□□□ 1.34
CALCOCO1-220ENST00000552282 BRD4O60885 1362 aaPredicted RBP23.44■■□□□ 1.34
CALCOCO1-220ENST00000552282 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
CALCOCO1-220ENST00000552282 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
CALCOCO1-220ENST00000552282 LMO7Q8WWI1 1683 aa23.44■■□□□ 1.34
CALCOCO1-220ENST00000552282 DISP2A7MBM2 1401 aa23.43■■□□□ 1.34
CALCOCO1-220ENST00000552282 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
CALCOCO1-220ENST00000552282 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
CALCOCO1-220ENST00000552282 LRP5O75197 1615 aa23.41■■□□□ 1.34
CALCOCO1-220ENST00000552282 USP19O94966 1318 aa23.41■■□□□ 1.34
CALCOCO1-220ENST00000552282 PRDM11Q9NQV5 511 aa23.41■■□□□ 1.34
CALCOCO1-220ENST00000552282 TNS1Q9HBL0 1735 aaKnown RBP23.41■■□□□ 1.34
CALCOCO1-220ENST00000552282 CPDO75976 1380 aa23.4■■□□□ 1.34
CALCOCO1-220ENST00000552282 ACEP12821 1306 aa23.4■■□□□ 1.34
CALCOCO1-220ENST00000552282 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
CALCOCO1-220ENST00000552282 PAK3O75914 559 aaPredicted RBP23.39■■□□□ 1.33
CALCOCO1-220ENST00000552282 PLEKHG5O94827 1062 aa23.39■■□□□ 1.33
CALCOCO1-220ENST00000552282 SF3B2Q13435 895 aaKnown RBP23.39■■□□□ 1.33
CALCOCO1-220ENST00000552282 NBPF1Q3BBV0 1214 aa23.39■■□□□ 1.33
CALCOCO1-220ENST00000552282 NBPF8Q3BBV2 869 aa23.39■■□□□ 1.33
CALCOCO1-220ENST00000552282 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
CALCOCO1-220ENST00000552282 SPATA31A1Q5TZJ5 1347 aa23.38■■□□□ 1.33
CALCOCO1-220ENST00000552282 TRPM1Q7Z4N2 1603 aa23.38■■□□□ 1.33
CALCOCO1-220ENST00000552282 CENPJQ9HC77 1338 aaPredicted RBP23.37■■□□□ 1.33
CALCOCO1-220ENST00000552282 PPIP5K1Q6PFW1 1433 aa23.35■■□□□ 1.33
CALCOCO1-220ENST00000552282 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
CALCOCO1-220ENST00000552282 SSH2Q76I76 1423 aa23.34■■□□□ 1.33
CALCOCO1-220ENST00000552282 SLIT3O75094 1523 aa23.33■■□□□ 1.33
CALCOCO1-220ENST00000552282 BAG6P46379 1132 aa23.33■■□□□ 1.33
CALCOCO1-220ENST00000552282 USP6P35125 1406 aa23.32■■□□□ 1.32
CALCOCO1-220ENST00000552282 BARGINQ6ZT62 677 aa23.31■■□□□ 1.32
CALCOCO1-220ENST00000552282 A0A0G2JS52 829 aa23.3■■□□□ 1.32
CALCOCO1-220ENST00000552282 MYT1Q01538 1121 aa23.3■■□□□ 1.32
CALCOCO1-220ENST00000552282 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
CALCOCO1-220ENST00000552282 PARP4Q9UKK3 1724 aaKnown RBP23.29■■□□□ 1.32
CALCOCO1-220ENST00000552282 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
CALCOCO1-220ENST00000552282 ABTB2Q8N961 1025 aa23.28■■□□□ 1.32
CALCOCO1-220ENST00000552282 COL5A2P05997 1499 aaPredicted RBP23.28■■□□□ 1.32
CALCOCO1-220ENST00000552282 SRPK2P78362 688 aaKnown RBP23.27■■□□□ 1.32
CALCOCO1-220ENST00000552282 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
CALCOCO1-220ENST00000552282 L3MBTL2Q969R5 705 aa23.27■■□□□ 1.32
CALCOCO1-220ENST00000552282 PIK3C2AO00443 1686 aa23.27■■□□□ 1.32
CALCOCO1-220ENST00000552282 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.31
CALCOCO1-220ENST00000552282 AKAP12Q02952 1782 aa23.25■■□□□ 1.31
CALCOCO1-220ENST00000552282 GCP02774 474 aa23.25■■□□□ 1.31
CALCOCO1-220ENST00000552282 THRAP3Q9Y2W1 955 aaKnown RBP23.25■■□□□ 1.31
CALCOCO1-220ENST00000552282 RREB1Q92766 1687 aa23.25■■□□□ 1.31
CALCOCO1-220ENST00000552282 NUTM2GQ5VZR2 741 aa23.24■■□□□ 1.31
CALCOCO1-220ENST00000552282 CABP2Q9NPB3 220 aa23.24■■□□□ 1.31
CALCOCO1-220ENST00000552282 COL18A1P39060 1754 aa23.24■■□□□ 1.31
CALCOCO1-220ENST00000552282 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
CALCOCO1-220ENST00000552282 SBNO2Q9Y2G9 1366 aa23.23■■□□□ 1.31
CALCOCO1-220ENST00000552282 STRN4Q9NRL3 753 aa23.22■■□□□ 1.31
CALCOCO1-220ENST00000552282 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
CALCOCO1-220ENST00000552282 EVC2Q86UK5 1308 aa23.21■■□□□ 1.31
CALCOCO1-220ENST00000552282 CRB1P82279 1406 aa23.21■■□□□ 1.31
CALCOCO1-220ENST00000552282 PEAK1Q9H792 1746 aa23.2■■□□□ 1.3
CALCOCO1-220ENST00000552282 ABCC6O95255 1503 aa23.2■■□□□ 1.3
CALCOCO1-220ENST00000552282 FAM182BQ5T319 152 aa23.2■■□□□ 1.3
CALCOCO1-220ENST00000552282 TCP11L2Q8N4U5 519 aa23.2■■□□□ 1.3
CALCOCO1-220ENST00000552282 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 EN1Q05925 392 aaPredicted RBP23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 RGPD3A6NKT7 1758 aaPredicted RBP23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 RGPD4Q7Z3J3 1758 aa23.19■■□□□ 1.3
CALCOCO1-220ENST00000552282 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
CALCOCO1-220ENST00000552282 ROCK2O75116 1388 aaKnown RBP23.18■■□□□ 1.3
CALCOCO1-220ENST00000552282 CAMKK2Q96RR4 588 aa23.18■■□□□ 1.3
CALCOCO1-220ENST00000552282 LRRC37A3O60309 1634 aa23.18■■□□□ 1.3
CALCOCO1-220ENST00000552282 MON2Q7Z3U7 1717 aa23.17■■□□□ 1.3
CALCOCO1-220ENST00000552282 C11orf95C9JLR9 678 aaPredicted RBP23.17■■□□□ 1.3
CALCOCO1-220ENST00000552282 EVA1CP58658 441 aa23.17■■□□□ 1.3
CALCOCO1-220ENST00000552282 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
CALCOCO1-220ENST00000552282 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
CALCOCO1-220ENST00000552282 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.29
CALCOCO1-220ENST00000552282 NFAT5O94916 1531 aa23.13■■□□□ 1.29
CALCOCO1-220ENST00000552282 TTC21AQ8NDW8 1320 aa23.13■■□□□ 1.29
CALCOCO1-220ENST00000552282 NLRP6P59044 892 aa23.13■■□□□ 1.29
CALCOCO1-220ENST00000552282 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
CALCOCO1-220ENST00000552282 BCL9O00512 1426 aa23.12■■□□□ 1.29
CALCOCO1-220ENST00000552282 TRIM37O94972 964 aa23.12■■□□□ 1.29
CALCOCO1-220ENST00000552282 EZH2Q15910 746 aaKnown RBP23.12■■□□□ 1.29
CALCOCO1-220ENST00000552282 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
CALCOCO1-220ENST00000552282 OVOS2A0A0G2JMS6 1433 aa23.11■■□□□ 1.29
CALCOCO1-220ENST00000552282 OVOS2A0A0J9YW53 1432 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms