RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
RBFOX1-214ENST00000552089 PDGFDQ9GZP0 370 aaPredicted RBP17.61■□□□□ 0.41
RBFOX1-214ENST00000552089 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
RBFOX1-214ENST00000552089 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-214ENST00000552089 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
RBFOX1-214ENST00000552089 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
RBFOX1-214ENST00000552089 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
RBFOX1-214ENST00000552089 NUP155O75694 1391 aa17.56■□□□□ 0.4
RBFOX1-214ENST00000552089 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
RBFOX1-214ENST00000552089 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
RBFOX1-214ENST00000552089 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
RBFOX1-214ENST00000552089 CLTCL1P53675 1640 aa17.54■□□□□ 0.4
RBFOX1-214ENST00000552089 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
RBFOX1-214ENST00000552089 CAPN15O75808 1086 aa17.54■□□□□ 0.4
RBFOX1-214ENST00000552089 HSPA6P17066 643 aa17.54■□□□□ 0.4
RBFOX1-214ENST00000552089 GPR162Q16538 588 aa17.53■□□□□ 0.4
RBFOX1-214ENST00000552089 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
RBFOX1-214ENST00000552089 TECPR2O15040 1411 aa17.52■□□□□ 0.39
RBFOX1-214ENST00000552089 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
RBFOX1-214ENST00000552089 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
RBFOX1-214ENST00000552089 STK26Q9P289 416 aa17.5■□□□□ 0.39
RBFOX1-214ENST00000552089 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-214ENST00000552089 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-214ENST00000552089 RGPD3A6NKT7 1758 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-214ENST00000552089 RGPD4Q7Z3J3 1758 aa17.49■□□□□ 0.39
RBFOX1-214ENST00000552089 STRN4Q9NRL3 753 aa17.48■□□□□ 0.39
RBFOX1-214ENST00000552089 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
RBFOX1-214ENST00000552089 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
RBFOX1-214ENST00000552089 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
RBFOX1-214ENST00000552089 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
RBFOX1-214ENST00000552089 MTFR1LQ9H019 292 aa17.47■□□□□ 0.39
RBFOX1-214ENST00000552089 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
RBFOX1-214ENST00000552089 ARXQ96QS3 562 aa17.46■□□□□ 0.39
RBFOX1-214ENST00000552089 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-214ENST00000552089 PLSCR1O15162 318 aa17.45■□□□□ 0.38
RBFOX1-214ENST00000552089 SLC34A2O95436 690 aa17.45■□□□□ 0.38
RBFOX1-214ENST00000552089 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-214ENST00000552089 KIF1BO60333 1816 aa17.43■□□□□ 0.38
RBFOX1-214ENST00000552089 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-214ENST00000552089 STK32BQ9NY57 414 aa17.43■□□□□ 0.38
RBFOX1-214ENST00000552089 ATP10DQ9P241 1426 aa17.43■□□□□ 0.38
RBFOX1-214ENST00000552089 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-214ENST00000552089 IFT172Q9UG01 1749 aa17.43■□□□□ 0.38
RBFOX1-214ENST00000552089 PMFBP1Q8TBY8 1022 aa17.42■□□□□ 0.38
RBFOX1-214ENST00000552089 ALS2Q96Q42 1657 aa17.41■□□□□ 0.38
RBFOX1-214ENST00000552089 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
RBFOX1-214ENST00000552089 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
RBFOX1-214ENST00000552089 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 CRYBG1Q9Y4K1 1723 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 SSH2Q76I76 1423 aa17.4■□□□□ 0.38
RBFOX1-214ENST00000552089 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.38
RBFOX1-214ENST00000552089 KNDC1Q76NI1 1749 aa17.39■□□□□ 0.37
RBFOX1-214ENST00000552089 PRELPP51888 382 aa17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 COL13A1Q5TAT6 717 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 PROM2Q8N271 834 aa17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 GPBP1L1Q9HC44 474 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-214ENST00000552089 PPLO60437 1756 aa17.37■□□□□ 0.37
RBFOX1-214ENST00000552089 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
RBFOX1-214ENST00000552089 PEAK1Q9H792 1746 aa17.36■□□□□ 0.37
RBFOX1-214ENST00000552089 EVA1CP58658 441 aa17.36■□□□□ 0.37
RBFOX1-214ENST00000552089 PTF1AQ7RTS3 328 aa17.36■□□□□ 0.37
RBFOX1-214ENST00000552089 TMEM132EQ6IEE7 984 aa17.34■□□□□ 0.37
RBFOX1-214ENST00000552089 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
RBFOX1-214ENST00000552089 TNS4Q8IZW8 715 aa17.34■□□□□ 0.37
RBFOX1-214ENST00000552089 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.37
RBFOX1-214ENST00000552089 ANKARQ7Z5J8 1434 aa17.33■□□□□ 0.37
RBFOX1-214ENST00000552089 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
RBFOX1-214ENST00000552089 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-214ENST00000552089 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
RBFOX1-214ENST00000552089 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-214ENST00000552089 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-214ENST00000552089 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
RBFOX1-214ENST00000552089 APLP1P51693 650 aa17.3■□□□□ 0.36
RBFOX1-214ENST00000552089 THRAP3Q9Y2W1 955 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-214ENST00000552089 ATP7BP35670 1465 aa17.3■□□□□ 0.36
RBFOX1-214ENST00000552089 GRIN3BO60391 1043 aa17.3■□□□□ 0.36
RBFOX1-214ENST00000552089 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-214ENST00000552089 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-214ENST00000552089 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
RBFOX1-214ENST00000552089 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.36
RBFOX1-214ENST00000552089 DNAJC5GQ8N7S2 189 aa17.28■□□□□ 0.36
RBFOX1-214ENST00000552089 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
RBFOX1-214ENST00000552089 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
RBFOX1-214ENST00000552089 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.35
RBFOX1-214ENST00000552089 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
RBFOX1-214ENST00000552089 ADCY9O60503 1353 aa17.26■□□□□ 0.35
RBFOX1-214ENST00000552089 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
RBFOX1-214ENST00000552089 POLD1P28340 1107 aa17.23■□□□□ 0.35
RBFOX1-214ENST00000552089 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
RBFOX1-214ENST00000552089 DDB1Q16531 1140 aa17.22■□□□□ 0.35
RBFOX1-214ENST00000552089 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
RBFOX1-214ENST00000552089 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-214ENST00000552089 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms