RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
SP1-204ENST00000551969 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
SP1-204ENST00000551969 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
SP1-204ENST00000551969 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
SP1-204ENST00000551969 KIAA1210Q9ULL0 1709 aa16.59■□□□□ 0.25
SP1-204ENST00000551969 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
SP1-204ENST00000551969 UNC5CLQ8IV45 518 aa16.58■□□□□ 0.24
SP1-204ENST00000551969 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
SP1-204ENST00000551969 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
SP1-204ENST00000551969 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
SP1-204ENST00000551969 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
SP1-204ENST00000551969 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
SP1-204ENST00000551969 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
SP1-204ENST00000551969 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
SP1-204ENST00000551969 TMC1Q8TDI8 760 aa16.54■□□□□ 0.24
SP1-204ENST00000551969 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
SP1-204ENST00000551969 POLR3AO14802 1390 aaPredicted RBP16.53■□□□□ 0.24
SP1-204ENST00000551969 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
SP1-204ENST00000551969 HDGFL2Q7Z4V5 671 aaPredicted RBP16.53■□□□□ 0.24
SP1-204ENST00000551969 PUS7Q96PZ0 661 aaKnown RBP16.53■□□□□ 0.24
SP1-204ENST00000551969 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
SP1-204ENST00000551969 EVA1CP58658 441 aa16.52■□□□□ 0.24
SP1-204ENST00000551969 TERF2IPQ9NYB0 399 aa16.52■□□□□ 0.24
SP1-204ENST00000551969 ATP7BP35670 1465 aa16.51■□□□□ 0.23
SP1-204ENST00000551969 FAM83GA6ND36 823 aa16.51■□□□□ 0.23
SP1-204ENST00000551969 NLRP6P59044 892 aa16.51■□□□□ 0.23
SP1-204ENST00000551969 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
SP1-204ENST00000551969 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
SP1-204ENST00000551969 TMF1P82094 1093 aa16.5■□□□□ 0.23
SP1-204ENST00000551969 BTG4Q9NY30 223 aa16.5■□□□□ 0.23
SP1-204ENST00000551969 VPS72Q15906 364 aa16.49■□□□□ 0.23
SP1-204ENST00000551969 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
SP1-204ENST00000551969 A0A0G2JS52 829 aa16.48■□□□□ 0.23
SP1-204ENST00000551969 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
SP1-204ENST00000551969 MYT1Q01538 1121 aa16.48■□□□□ 0.23
SP1-204ENST00000551969 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
SP1-204ENST00000551969 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
SP1-204ENST00000551969 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
SP1-204ENST00000551969 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
SP1-204ENST00000551969 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
SP1-204ENST00000551969 GCP02774 474 aa16.46■□□□□ 0.23
SP1-204ENST00000551969 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
SP1-204ENST00000551969 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
SP1-204ENST00000551969 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
SP1-204ENST00000551969 ZBTB7CA1YPR0 619 aa16.44■□□□□ 0.22
SP1-204ENST00000551969 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
SP1-204ENST00000551969 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
SP1-204ENST00000551969 ATRNO75882 1429 aa16.44■□□□□ 0.22
SP1-204ENST00000551969 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
SP1-204ENST00000551969 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
SP1-204ENST00000551969 USP32Q8NFA0 1604 aa16.43■□□□□ 0.22
SP1-204ENST00000551969 TTC21BQ7Z4L5 1316 aa16.43■□□□□ 0.22
SP1-204ENST00000551969 SLC12A5Q9H2X9 1139 aa16.42■□□□□ 0.22
SP1-204ENST00000551969 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
SP1-204ENST00000551969 SLIT2O94813 1529 aa16.41■□□□□ 0.22
SP1-204ENST00000551969 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
SP1-204ENST00000551969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
SP1-204ENST00000551969 UPF1Q92900 1129 aaKnown RBP eCLIP16.41■□□□□ 0.22
SP1-204ENST00000551969 USP6P35125 1406 aa16.41■□□□□ 0.22
SP1-204ENST00000551969 USP47Q96K76 1375 aa16.4■□□□□ 0.22
SP1-204ENST00000551969 NINLQ9Y2I6 1382 aa16.4■□□□□ 0.22
SP1-204ENST00000551969 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
SP1-204ENST00000551969 SEPT12Q8IYM1 358 aa16.4■□□□□ 0.22
SP1-204ENST00000551969 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
SP1-204ENST00000551969 EIF4G2P78344 907 aaKnown RBP eCLIP16.39■□□□□ 0.21
SP1-204ENST00000551969 TESK2Q96S53 571 aa16.39■□□□□ 0.21
SP1-204ENST00000551969 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
SP1-204ENST00000551969 USP19O94966 1318 aa16.38■□□□□ 0.21
SP1-204ENST00000551969 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
SP1-204ENST00000551969 KRT27Q7Z3Y8 459 aa16.37■□□□□ 0.21
SP1-204ENST00000551969 CPDO75976 1380 aa16.37■□□□□ 0.21
SP1-204ENST00000551969 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
SP1-204ENST00000551969 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
SP1-204ENST00000551969 SOX12O15370 315 aa16.36■□□□□ 0.21
SP1-204ENST00000551969 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
SP1-204ENST00000551969 RGS12O14924 1447 aa16.36■□□□□ 0.21
SP1-204ENST00000551969 CSB-PGBD3P0DP91 1061 aa16.35■□□□□ 0.21
SP1-204ENST00000551969 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
SP1-204ENST00000551969 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
SP1-204ENST00000551969 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
SP1-204ENST00000551969 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
SP1-204ENST00000551969 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
SP1-204ENST00000551969 COG3Q96JB2 828 aa16.34■□□□□ 0.21
SP1-204ENST00000551969 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
SP1-204ENST00000551969 TCP11L2Q8N4U5 519 aa16.33■□□□□ 0.2
SP1-204ENST00000551969 POLR3GLQ9BT43 218 aa16.33■□□□□ 0.2
SP1-204ENST00000551969 SPATA31A1Q5TZJ5 1347 aa16.32■□□□□ 0.2
SP1-204ENST00000551969 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
SP1-204ENST00000551969 SSH2Q76I76 1423 aa16.31■□□□□ 0.2
SP1-204ENST00000551969 C11orf95C9JLR9 678 aaPredicted RBP16.31■□□□□ 0.2
SP1-204ENST00000551969 BARGINQ6ZT62 677 aa16.31■□□□□ 0.2
SP1-204ENST00000551969 ARHGEF25Q86VW2 580 aa16.31■□□□□ 0.2
SP1-204ENST00000551969 NME9Q86XW9 330 aa16.31■□□□□ 0.2
SP1-204ENST00000551969 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
SP1-204ENST00000551969 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
SP1-204ENST00000551969 CDCA7Q9BWT1 371 aaPredicted RBP16.3■□□□□ 0.2
SP1-204ENST00000551969 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
SP1-204ENST00000551969 USP31Q70CQ4 1352 aa16.28■□□□□ 0.2
SP1-204ENST00000551969 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
SP1-204ENST00000551969 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms