RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	GPRASP1	Q5JY77	1395 aa		18.51	■□□□□ 0.55
LETMD1-231	ENST00000551931	ATP7B	P35670	1465 aa		18.51	■□□□□ 0.55
LETMD1-231	ENST00000551931	RGPD1	P0DJD0	1748 aa		18.5	■□□□□ 0.55
LETMD1-231	ENST00000551931	KRT27	Q7Z3Y8	459 aa		18.5	■□□□□ 0.55
LETMD1-231	ENST00000551931	BTG4	Q9NY30	223 aa		18.5	■□□□□ 0.55
LETMD1-231	ENST00000551931	THSD7A	Q9UPZ6	1657 aa		18.5	■□□□□ 0.55
LETMD1-231	ENST00000551931	TNS1	Q9HBL0	1735 aa	Known RBP	18.48	■□□□□ 0.55
LETMD1-231	ENST00000551931	KIAA1210	Q9ULL0	1709 aa		18.48	■□□□□ 0.55
LETMD1-231	ENST00000551931	SF3B2	Q13435	895 aa	Known RBP	18.47	■□□□□ 0.55
LETMD1-231	ENST00000551931	FAM98C	Q17RN3	349 aa	Known RBP	18.47	■□□□□ 0.55
LETMD1-231	ENST00000551931	LRP5	O75197	1615 aa		18.46	■□□□□ 0.55
LETMD1-231	ENST00000551931		A0A0G2JS52	829 aa		18.46	■□□□□ 0.55
LETMD1-231	ENST00000551931	MYT1	Q01538	1121 aa		18.46	■□□□□ 0.55
LETMD1-231	ENST00000551931	NGDN	Q8NEJ9	315 aa	Known RBP	18.46	■□□□□ 0.55
LETMD1-231	ENST00000551931	PAK3	O75914	559 aa	Predicted RBP	18.44	■□□□□ 0.54
LETMD1-231	ENST00000551931	STAC3	Q96MF2	364 aa		18.44	■□□□□ 0.54
LETMD1-231	ENST00000551931	SPATA31A5	Q5VU36	1347 aa		18.43	■□□□□ 0.54
LETMD1-231	ENST00000551931	SPATA31A7	Q8IWB4	1347 aa		18.43	■□□□□ 0.54
LETMD1-231	ENST00000551931	NUDT16	Q96DE0	195 aa	Known RBP	18.42	■□□□□ 0.54
LETMD1-231	ENST00000551931	FAM182B	Q5T319	152 aa		18.41	■□□□□ 0.54
LETMD1-231	ENST00000551931	PRDM11	Q9NQV5	511 aa		18.41	■□□□□ 0.54
LETMD1-231	ENST00000551931	NRK	Q7Z2Y5	1582 aa		18.41	■□□□□ 0.54
LETMD1-231	ENST00000551931	KIAA0232	Q92628	1395 aa		18.41	■□□□□ 0.54
LETMD1-231	ENST00000551931	HRC	P23327	699 aa		18.4	■□□□□ 0.54
LETMD1-231	ENST00000551931	BAG6	P46379	1132 aa		18.39	■□□□□ 0.53
LETMD1-231	ENST00000551931	CHRNA2	Q15822	529 aa		18.38	■□□□□ 0.53
LETMD1-231	ENST00000551931	CDK19	Q9BWU1	502 aa		18.38	■□□□□ 0.53
LETMD1-231	ENST00000551931	POLR3A	O14802	1390 aa	Predicted RBP	18.38	■□□□□ 0.53
LETMD1-231	ENST00000551931	LMO7	Q8WWI1	1683 aa		18.38	■□□□□ 0.53
LETMD1-231	ENST00000551931	QRICH2	Q9H0J4	1663 aa		18.38	■□□□□ 0.53
LETMD1-231	ENST00000551931	PSD	A5PKW4	1024 aa	Predicted RBP	18.37	■□□□□ 0.53
LETMD1-231	ENST00000551931	NUTM2G	Q5VZR2	741 aa		18.37	■□□□□ 0.53
LETMD1-231	ENST00000551931	ACE	P12821	1306 aa		18.36	■□□□□ 0.53
LETMD1-231	ENST00000551931	SPATA31A1	Q5TZJ5	1347 aa		18.36	■□□□□ 0.53
LETMD1-231	ENST00000551931	ZC3H6	P61129	1189 aa	Known RBP	18.35	■□□□□ 0.53
LETMD1-231	ENST00000551931	EN1	Q05925	392 aa	Predicted RBP	18.35	■□□□□ 0.53
LETMD1-231	ENST00000551931	DISP2	A7MBM2	1401 aa		18.34	■□□□□ 0.53
LETMD1-231	ENST00000551931	STRN4	Q9NRL3	753 aa		18.34	■□□□□ 0.53
LETMD1-231	ENST00000551931	CAMTA1	Q9Y6Y1	1673 aa		18.34	■□□□□ 0.53
LETMD1-231	ENST00000551931	NBPF1	Q3BBV0	1214 aa		18.33	■□□□□ 0.52
LETMD1-231	ENST00000551931	NBPF8	Q3BBV2	869 aa		18.33	■□□□□ 0.52
LETMD1-231	ENST00000551931	CCDC61	Q9Y6R9	512 aa		18.33	■□□□□ 0.52
LETMD1-231	ENST00000551931	RREB1	Q92766	1687 aa		18.33	■□□□□ 0.52
LETMD1-231	ENST00000551931	PLEKHG3	A1L390	1219 aa		18.32	■□□□□ 0.52
LETMD1-231	ENST00000551931	SSH2	Q76I76	1423 aa		18.32	■□□□□ 0.52
LETMD1-231	ENST00000551931	NUP188	Q5SRE5	1749 aa		18.3	■□□□□ 0.52
LETMD1-231	ENST00000551931	PARP4	Q9UKK3	1724 aa	Known RBP	18.3	■□□□□ 0.52
LETMD1-231	ENST00000551931	PPIP5K1	Q6PFW1	1433 aa		18.3	■□□□□ 0.52
LETMD1-231	ENST00000551931	USP19	O94966	1318 aa		18.29	■□□□□ 0.52
LETMD1-231	ENST00000551931	USP35	Q9P2H5	1018 aa		18.29	■□□□□ 0.52
LETMD1-231	ENST00000551931	CPD	O75976	1380 aa		18.29	■□□□□ 0.52
LETMD1-231	ENST00000551931	TRIM37	O94972	964 aa		18.28	■□□□□ 0.52
LETMD1-231	ENST00000551931	EZH2	Q15910	746 aa	Known RBP	18.28	■□□□□ 0.52
LETMD1-231	ENST00000551931	ABTB2	Q8N961	1025 aa		18.28	■□□□□ 0.52
LETMD1-231	ENST00000551931	WNK3	Q9BYP7	1800 aa		18.28	■□□□□ 0.52
LETMD1-231	ENST00000551931	R3HDM1	Q15032	1099 aa	Known RBP	18.27	■□□□□ 0.52
LETMD1-231	ENST00000551931	SBF2	Q86WG5	1849 aa		18.27	■□□□□ 0.52
LETMD1-231	ENST00000551931	PIK3C2A	O00443	1686 aa		18.26	■□□□□ 0.51
LETMD1-231	ENST00000551931	LARP1	Q6PKG0	1096 aa	Known RBP	18.26	■□□□□ 0.51
LETMD1-231	ENST00000551931	FAM196A	Q6ZSG2	479 aa		18.26	■□□□□ 0.51
LETMD1-231	ENST00000551931	RGPD5	Q99666	1765 aa		18.26	■□□□□ 0.51
LETMD1-231	ENST00000551931	TRPM1	Q7Z4N2	1603 aa		18.26	■□□□□ 0.51
LETMD1-231	ENST00000551931	CENPJ	Q9HC77	1338 aa	Predicted RBP	18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	EVA1C	P58658	441 aa		18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	SRPK2	P78362	688 aa	Known RBP	18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	BARGIN	Q6ZT62	677 aa		18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	CAMKK2	Q96RR4	588 aa		18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	CABP2	Q9NPB3	220 aa		18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	COL5A2	P05997	1499 aa	Predicted RBP	18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	COL18A1	P39060	1754 aa		18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	AKAP12	Q02952	1782 aa		18.25	■□□□□ 0.51
LETMD1-231	ENST00000551931	SLIT3	O75094	1523 aa		18.23	■□□□□ 0.51
LETMD1-231	ENST00000551931	LRRC37A3	O60309	1634 aa		18.23	■□□□□ 0.51
LETMD1-231	ENST00000551931	PEAK1	Q9H792	1746 aa		18.23	■□□□□ 0.51
LETMD1-231	ENST00000551931	USP6	P35125	1406 aa		18.23	■□□□□ 0.51
LETMD1-231	ENST00000551931	GC	P02774	474 aa		18.22	■□□□□ 0.51
LETMD1-231	ENST00000551931	NLRP13	Q86W25	1043 aa		18.22	■□□□□ 0.51
LETMD1-231	ENST00000551931	TCP11L2	Q8N4U5	519 aa		18.22	■□□□□ 0.51
LETMD1-231	ENST00000551931	PARD3	Q8TEW0	1356 aa		18.21	■□□□□ 0.51
LETMD1-231	ENST00000551931	APBA3	O96018	575 aa		18.21	■□□□□ 0.51
LETMD1-231	ENST00000551931	PDE3B	Q13370	1112 aa		18.21	■□□□□ 0.51
LETMD1-231	ENST00000551931	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.19	■□□□□ 0.5
LETMD1-231	ENST00000551931	RGPD4	Q7Z3J3	1758 aa		18.19	■□□□□ 0.5
LETMD1-231	ENST00000551931	BRD4	O60885	1362 aa	Predicted RBP	18.19	■□□□□ 0.5
LETMD1-231	ENST00000551931	CABP1	Q9NZU7	370 aa		18.19	■□□□□ 0.5
LETMD1-231	ENST00000551931	CRB1	P82279	1406 aa		18.18	■□□□□ 0.5
LETMD1-231	ENST00000551931	THRAP3	Q9Y2W1	955 aa	Known RBP	18.18	■□□□□ 0.5
LETMD1-231	ENST00000551931	ZBTB7C	A1YPR0	619 aa		18.16	■□□□□ 0.5
LETMD1-231	ENST00000551931	L3MBTL2	Q969R5	705 aa		18.16	■□□□□ 0.5
LETMD1-231	ENST00000551931	AATK	Q6ZMQ8	1374 aa		18.16	■□□□□ 0.5
LETMD1-231	ENST00000551931	MON2	Q7Z3U7	1717 aa		18.15	■□□□□ 0.5
LETMD1-231	ENST00000551931	NLRP6	P59044	892 aa		18.15	■□□□□ 0.5
LETMD1-231	ENST00000551931	OVOS2	A0A0G2JMS6	1433 aa		18.14	■□□□□ 0.49
LETMD1-231	ENST00000551931	OVOS2	A0A0J9YW53	1432 aa		18.14	■□□□□ 0.49
LETMD1-231	ENST00000551931	OVOS2	Q6IE36	1432 aa		18.14	■□□□□ 0.49
LETMD1-231	ENST00000551931	SIN3A	Q96ST3	1273 aa		18.12	■□□□□ 0.49
LETMD1-231	ENST00000551931	EVC2	Q86UK5	1308 aa		18.12	■□□□□ 0.49
LETMD1-231	ENST00000551931	CPSF1	Q10570	1443 aa	Known RBP	18.12	■□□□□ 0.49
LETMD1-231	ENST00000551931	AXIN2	Q9Y2T1	843 aa		18.11	■□□□□ 0.49
LETMD1-231	ENST00000551931	LTN1	O94822	1766 aa		18.1	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms