RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 SLC12A5Q9H2X9 1139 aa22.94■■□□□ 1.26
GCN1-209ENST00000551920 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
GCN1-209ENST00000551920 PAK3O75914 559 aaPredicted RBP22.93■■□□□ 1.26
GCN1-209ENST00000551920 CABLES1Q8TDN4 633 aa22.93■■□□□ 1.26
GCN1-209ENST00000551920 MYOM1P52179 1685 aa22.93■■□□□ 1.26
GCN1-209ENST00000551920 A0A1W2PP64 1363 aa22.91■■□□□ 1.26
GCN1-209ENST00000551920 PIK3C2AO00443 1686 aa22.91■■□□□ 1.26
GCN1-209ENST00000551920 ADAMTS2O95450 1211 aa22.91■■□□□ 1.26
GCN1-209ENST00000551920 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
GCN1-209ENST00000551920 RGS17Q9UGC6 210 aaPredicted RBP22.91■■□□□ 1.26
GCN1-209ENST00000551920 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
GCN1-209ENST00000551920 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
GCN1-209ENST00000551920 BRD4O60885 1362 aaPredicted RBP22.89■■□□□ 1.26
GCN1-209ENST00000551920 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.26
GCN1-209ENST00000551920 MEX3CQ5U5Q3 659 aaKnown RBP22.88■■□□□ 1.25
GCN1-209ENST00000551920 NUTM2GQ5VZR2 741 aa22.88■■□□□ 1.25
GCN1-209ENST00000551920 PHRF1Q9P1Y6 1649 aaKnown RBP22.88■■□□□ 1.25
GCN1-209ENST00000551920 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
GCN1-209ENST00000551920 MARF1Q9Y4F3 1742 aaKnown RBP22.87■■□□□ 1.25
GCN1-209ENST00000551920 TTC21BQ7Z4L5 1316 aa22.86■■□□□ 1.25
GCN1-209ENST00000551920 C11orf95C9JLR9 678 aaPredicted RBP22.86■■□□□ 1.25
GCN1-209ENST00000551920 ZNF692Q9BU19 519 aaPredicted RBP22.86■■□□□ 1.25
GCN1-209ENST00000551920 USP19O94966 1318 aa22.85■■□□□ 1.25
GCN1-209ENST00000551920 CDCA8Q53HL2 280 aa22.85■■□□□ 1.25
GCN1-209ENST00000551920 C8orf37Q96NL8 207 aa22.85■■□□□ 1.25
GCN1-209ENST00000551920 ANKRD36BQ8N2N9 1353 aa22.85■■□□□ 1.25
GCN1-209ENST00000551920 EDC4Q6P2E9 1401 aaKnown RBP22.84■■□□□ 1.25
GCN1-209ENST00000551920 ABTB2Q8N961 1025 aa22.84■■□□□ 1.25
GCN1-209ENST00000551920 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
GCN1-209ENST00000551920 AFF2P51816 1311 aa22.82■■□□□ 1.24
GCN1-209ENST00000551920 HDGFL2Q7Z4V5 671 aaPredicted RBP22.82■■□□□ 1.24
GCN1-209ENST00000551920 SLIT3O75094 1523 aa22.82■■□□□ 1.24
GCN1-209ENST00000551920 TTC21AQ8NDW8 1320 aa22.81■■□□□ 1.24
GCN1-209ENST00000551920 HAP1P54257 671 aaPredicted RBP22.8■■□□□ 1.24
GCN1-209ENST00000551920 USP54Q70EL1 1684 aa22.79■■□□□ 1.24
GCN1-209ENST00000551920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.79■■□□□ 1.24
GCN1-209ENST00000551920 SLIT2O94813 1529 aa22.78■■□□□ 1.24
GCN1-209ENST00000551920 POTEAQ6S8J7 498 aa22.78■■□□□ 1.24
GCN1-209ENST00000551920 NME9Q86XW9 330 aa22.78■■□□□ 1.24
GCN1-209ENST00000551920 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
GCN1-209ENST00000551920 ZRANB1Q9UGI0 708 aa22.78■■□□□ 1.24
GCN1-209ENST00000551920 PLCH1Q4KWH8 1693 aa22.77■■□□□ 1.24
GCN1-209ENST00000551920 NLRP6P59044 892 aa22.77■■□□□ 1.24
GCN1-209ENST00000551920 FNBP4Q8N3X1 1017 aaPredicted RBP22.77■■□□□ 1.24
GCN1-209ENST00000551920 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
GCN1-209ENST00000551920 BCL9LQ86UU0 1499 aa22.77■■□□□ 1.24
GCN1-209ENST00000551920 KIF7Q2M1P5 1343 aa22.77■■□□□ 1.24
GCN1-209ENST00000551920 NLRP13Q86W25 1043 aa22.76■■□□□ 1.23
GCN1-209ENST00000551920 USP31Q70CQ4 1352 aa22.76■■□□□ 1.23
GCN1-209ENST00000551920 KIAA0232Q92628 1395 aa22.76■■□□□ 1.23
GCN1-209ENST00000551920 OVOS2A0A0J9YW53 1432 aa22.75■■□□□ 1.23
GCN1-209ENST00000551920 OVOS2Q6IE36 1432 aa22.75■■□□□ 1.23
GCN1-209ENST00000551920 NFAT5O94916 1531 aa22.74■■□□□ 1.23
GCN1-209ENST00000551920 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
GCN1-209ENST00000551920 ILDR2Q71H61 639 aa22.74■■□□□ 1.23
GCN1-209ENST00000551920 CARD14Q9BXL6 1004 aa22.74■■□□□ 1.23
GCN1-209ENST00000551920 GCP02774 474 aa22.73■■□□□ 1.23
GCN1-209ENST00000551920 COL14A1Q05707 1796 aaKnown RBP22.73■■□□□ 1.23
GCN1-209ENST00000551920 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
GCN1-209ENST00000551920 NRAPQ86VF7 1730 aa22.72■■□□□ 1.23
GCN1-209ENST00000551920 ZNF772Q68DY9 489 aaPredicted RBP22.72■■□□□ 1.23
GCN1-209ENST00000551920 CPDO75976 1380 aa22.72■■□□□ 1.23
GCN1-209ENST00000551920 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
GCN1-209ENST00000551920 ZC3H6P61129 1189 aaKnown RBP22.71■■□□□ 1.23
GCN1-209ENST00000551920 USP21Q9UK80 565 aa22.71■■□□□ 1.23
GCN1-209ENST00000551920 ATRNO75882 1429 aa22.71■■□□□ 1.23
GCN1-209ENST00000551920 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
GCN1-209ENST00000551920 PRDM11Q9NQV5 511 aa22.7■■□□□ 1.22
GCN1-209ENST00000551920 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
GCN1-209ENST00000551920 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
GCN1-209ENST00000551920 WASHC2AQ641Q2 1341 aa22.69■■□□□ 1.22
GCN1-209ENST00000551920 CHRNA2Q15822 529 aa22.69■■□□□ 1.22
GCN1-209ENST00000551920 KIF20BQ96Q89 1820 aa22.66■■□□□ 1.22
GCN1-209ENST00000551920 SOX12O15370 315 aa22.66■■□□□ 1.22
GCN1-209ENST00000551920 UNC5CLQ8IV45 518 aa22.66■■□□□ 1.22
GCN1-209ENST00000551920 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
GCN1-209ENST00000551920 FYB1O15117 783 aa22.65■■□□□ 1.22
GCN1-209ENST00000551920 PANK3Q9H999 370 aa22.65■■□□□ 1.22
GCN1-209ENST00000551920 BTG4Q9NY30 223 aa22.65■■□□□ 1.22
GCN1-209ENST00000551920 QTRT2Q9H974 415 aaKnown RBP22.64■■□□□ 1.21
GCN1-209ENST00000551920 COL18A1P39060 1754 aa22.63■■□□□ 1.21
GCN1-209ENST00000551920 GGNBP2Q9H3C7 697 aa22.63■■□□□ 1.21
GCN1-209ENST00000551920 GLI3P10071 1580 aa22.63■■□□□ 1.21
GCN1-209ENST00000551920 ARHGEF25Q86VW2 580 aa22.62■■□□□ 1.21
GCN1-209ENST00000551920 KCNH5Q8NCM2 988 aa22.62■■□□□ 1.21
GCN1-209ENST00000551920 TRPC5Q9UL62 973 aaPredicted RBP22.62■■□□□ 1.21
GCN1-209ENST00000551920 AATKQ6ZMQ8 1374 aa22.62■■□□□ 1.21
GCN1-209ENST00000551920 ZEB1P37275 1124 aaPredicted RBP22.61■■□□□ 1.21
GCN1-209ENST00000551920 COG3Q96JB2 828 aa22.6■■□□□ 1.21
GCN1-209ENST00000551920 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
GCN1-209ENST00000551920 RGS12O14924 1447 aa22.59■■□□□ 1.21
GCN1-209ENST00000551920 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
GCN1-209ENST00000551920 CGNL1Q0VF96 1302 aa22.58■■□□□ 1.21
GCN1-209ENST00000551920 ABCC6O95255 1503 aa22.58■■□□□ 1.21
GCN1-209ENST00000551920 RXRBP28702 533 aa22.58■■□□□ 1.21
GCN1-209ENST00000551920 VPS72Q15906 364 aa22.58■■□□□ 1.21
GCN1-209ENST00000551920 LTN1O94822 1766 aa22.58■■□□□ 1.2
GCN1-209ENST00000551920 FBLN1P23142 703 aa22.57■■□□□ 1.2
GCN1-209ENST00000551920 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
GCN1-209ENST00000551920 AXIN2Q9Y2T1 843 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms