RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 RNF40O75150 1001 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 TMEM134Q9H6X4 195 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 YEATS2Q9ULM3 1422 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 CCNB3Q8WWL7 1395 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-213ENST00000551752 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
RBFOX1-213ENST00000551752 PTPRMP28827 1452 aa12.91□□□□□ -0.34
RBFOX1-213ENST00000551752 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
RBFOX1-213ENST00000551752 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-213ENST00000551752 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
RBFOX1-213ENST00000551752 AGLP35573 1532 aa12.9□□□□□ -0.34
RBFOX1-213ENST00000551752 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
RBFOX1-213ENST00000551752 LOC105371045A0A1W2PR82 267 aa12.9□□□□□ -0.34
RBFOX1-213ENST00000551752 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
RBFOX1-213ENST00000551752 TSR3Q9UJK0 312 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-213ENST00000551752 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.35
RBFOX1-213ENST00000551752 PPP4CP60510 307 aa12.89□□□□□ -0.35
RBFOX1-213ENST00000551752 PHOX2BQ99453 314 aa12.89□□□□□ -0.35
RBFOX1-213ENST00000551752 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
RBFOX1-213ENST00000551752 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
RBFOX1-213ENST00000551752 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
RBFOX1-213ENST00000551752 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
RBFOX1-213ENST00000551752 SAMD9LQ8IVG5 1584 aa12.86□□□□□ -0.35
RBFOX1-213ENST00000551752 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
RBFOX1-213ENST00000551752 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
RBFOX1-213ENST00000551752 RTEL1-TNFRSF6BF6WH68 1400 aa12.86□□□□□ -0.35
RBFOX1-213ENST00000551752 DIP2CQ9Y2E4 1556 aa12.86□□□□□ -0.35
RBFOX1-213ENST00000551752 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
RBFOX1-213ENST00000551752 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-213ENST00000551752 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-213ENST00000551752 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
RBFOX1-213ENST00000551752 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
RBFOX1-213ENST00000551752 LRRC9Q6ZRR7 1453 aa12.84□□□□□ -0.35
RBFOX1-213ENST00000551752 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
RBFOX1-213ENST00000551752 SETD1BQ9UPS6 1966 aaKnown RBP12.83□□□□□ -0.35
RBFOX1-213ENST00000551752 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
RBFOX1-213ENST00000551752 AK7Q96M32 723 aa12.83□□□□□ -0.36
RBFOX1-213ENST00000551752 NCOA2Q15596 1464 aa12.83□□□□□ -0.36
RBFOX1-213ENST00000551752 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
RBFOX1-213ENST00000551752 HNRNPMP52272 730 aaKnown RBP eCLIP12.82□□□□□ -0.36
RBFOX1-213ENST00000551752 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
RBFOX1-213ENST00000551752 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-213ENST00000551752 SYCP2Q9BX26 1530 aa12.82□□□□□ -0.36
RBFOX1-213ENST00000551752 CNTLNQ9NXG0 1405 aa12.81□□□□□ -0.36
RBFOX1-213ENST00000551752 MDM2Q00987 491 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-213ENST00000551752 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
RBFOX1-213ENST00000551752 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
RBFOX1-213ENST00000551752 ATP7AQ04656 1500 aa12.79□□□□□ -0.36
RBFOX1-213ENST00000551752 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-213ENST00000551752 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
RBFOX1-213ENST00000551752 RIMS1Q86UR5 1692 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-213ENST00000551752 FER1L4A9Z1Z3 1794 aa12.79□□□□□ -0.36
RBFOX1-213ENST00000551752 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
RBFOX1-213ENST00000551752 CLCN1P35523 988 aa12.78□□□□□ -0.36
RBFOX1-213ENST00000551752 ARHGEF5Q12774 1597 aa12.77□□□□□ -0.36
RBFOX1-213ENST00000551752 A2MP01023 1474 aa12.77□□□□□ -0.37
RBFOX1-213ENST00000551752 PLXNC1O60486 1568 aa12.77□□□□□ -0.37
RBFOX1-213ENST00000551752 TRIM66O15016 1216 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 MLECQ14165 292 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
RBFOX1-213ENST00000551752 SLC10A3P09131 477 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 TSPY4P0CV99 314 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 TSPY10P0CW01 314 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 AMHR2Q16671 573 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 ADGBQ8N7X0 1667 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 PRR14Q9BWN1 585 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 FAM135AQ9P2D6 1515 aa12.75□□□□□ -0.37
RBFOX1-213ENST00000551752 CAMSAP2Q08AD1 1489 aa12.74□□□□□ -0.37
RBFOX1-213ENST00000551752 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
RBFOX1-213ENST00000551752 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-213ENST00000551752 CFHP08603 1231 aa12.73□□□□□ -0.37
RBFOX1-213ENST00000551752 APLP1P51693 650 aa12.73□□□□□ -0.37
RBFOX1-213ENST00000551752 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
RBFOX1-213ENST00000551752 MROH2AA6NES4 1674 aa12.73□□□□□ -0.37
RBFOX1-213ENST00000551752 NPATQ14207 1427 aa12.72□□□□□ -0.37
RBFOX1-213ENST00000551752 MAST1Q9Y2H9 1570 aa12.71□□□□□ -0.37
RBFOX1-213ENST00000551752 PREX1Q8TCU6 1659 aa12.7□□□□□ -0.38
RBFOX1-213ENST00000551752 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
RBFOX1-213ENST00000551752 PDE4DQ08499 809 aa12.69□□□□□ -0.38
RBFOX1-213ENST00000551752 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
RBFOX1-213ENST00000551752 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-213ENST00000551752 UHRF1BP1Q6BDS2 1440 aa12.69□□□□□ -0.38
RBFOX1-213ENST00000551752 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
RBFOX1-213ENST00000551752 C3P01024 1663 aa12.67□□□□□ -0.38
RBFOX1-213ENST00000551752 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 CD46P15529 392 aa12.66□□□□□ -0.38
RBFOX1-213ENST00000551752 CEBPAP49715 358 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms