RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
DEPDC4-210ENST00000551642 UACAQ9BZF9 1416 aa11.59□□□□□ -0.55
DEPDC4-210ENST00000551642 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
DEPDC4-210ENST00000551642 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.56
DEPDC4-210ENST00000551642 FMNL1O95466 1100 aaPredicted RBP11.58□□□□□ -0.56
DEPDC4-210ENST00000551642 S1PR4O95977 384 aa11.58□□□□□ -0.56
DEPDC4-210ENST00000551642 ARAP3Q8WWN8 1544 aa11.58□□□□□ -0.56
DEPDC4-210ENST00000551642 MED1Q15648 1581 aaPredicted RBP11.58□□□□□ -0.56
DEPDC4-210ENST00000551642 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
DEPDC4-210ENST00000551642 BCANQ96GW7 911 aa11.57□□□□□ -0.56
DEPDC4-210ENST00000551642 AK7Q96M32 723 aa11.57□□□□□ -0.56
DEPDC4-210ENST00000551642 CD109Q6YHK3 1445 aa11.57□□□□□ -0.56
DEPDC4-210ENST00000551642 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
DEPDC4-210ENST00000551642 SIGLEC1Q9BZZ2 1709 aa11.56□□□□□ -0.56
DEPDC4-210ENST00000551642 SSTR3P32745 418 aaPredicted RBP11.55□□□□□ -0.56
DEPDC4-210ENST00000551642 Q3C1V9 767 aa11.55□□□□□ -0.56
DEPDC4-210ENST00000551642 TRIM66O15016 1216 aa11.54□□□□□ -0.56
DEPDC4-210ENST00000551642 PREX1Q8TCU6 1659 aa11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 HOXA2O43364 376 aa11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 LAPTM4AQ15012 233 aa11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 FAM160A2Q8N612 972 aaPredicted RBP11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 FRMPD1Q5SYB0 1578 aa11.53□□□□□ -0.56
DEPDC4-210ENST00000551642 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
DEPDC4-210ENST00000551642 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
DEPDC4-210ENST00000551642 SLC19A1P41440 591 aa11.51□□□□□ -0.57
DEPDC4-210ENST00000551642 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
DEPDC4-210ENST00000551642 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
DEPDC4-210ENST00000551642 YEATS2Q9ULM3 1422 aa11.51□□□□□ -0.57
DEPDC4-210ENST00000551642 RNF19BQ6ZMZ0 732 aa11.5□□□□□ -0.57
DEPDC4-210ENST00000551642 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
DEPDC4-210ENST00000551642 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
DEPDC4-210ENST00000551642 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
DEPDC4-210ENST00000551642 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
DEPDC4-210ENST00000551642 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
DEPDC4-210ENST00000551642 CARMIL2Q6F5E8 1435 aa11.48□□□□□ -0.57
DEPDC4-210ENST00000551642 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
DEPDC4-210ENST00000551642 RAPGEF3O95398 923 aa11.47□□□□□ -0.57
DEPDC4-210ENST00000551642 SPRYD7Q5W111 196 aa11.47□□□□□ -0.57
DEPDC4-210ENST00000551642 LIAT1Q6ZQX7 453 aa11.46□□□□□ -0.57
DEPDC4-210ENST00000551642 USB1Q9BQ65 265 aaKnown RBP11.46□□□□□ -0.57
DEPDC4-210ENST00000551642 MMP16P51512 607 aa11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 SPIRE2Q8WWL2 714 aa11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 HLA-CQ95604 372 aa11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
DEPDC4-210ENST00000551642 NRG2O14511 850 aaPredicted RBP11.44□□□□□ -0.58
DEPDC4-210ENST00000551642 GFRA3O60609 400 aa11.44□□□□□ -0.58
DEPDC4-210ENST00000551642 RPIAP49247 311 aa11.44□□□□□ -0.58
DEPDC4-210ENST00000551642 DIXDC1Q155Q3 683 aa11.44□□□□□ -0.58
DEPDC4-210ENST00000551642 PTPRTO14522 1441 aa11.43□□□□□ -0.58
DEPDC4-210ENST00000551642 PDE4DQ08499 809 aa11.43□□□□□ -0.58
DEPDC4-210ENST00000551642 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
DEPDC4-210ENST00000551642 PRDM9Q9NQV7 894 aa11.43□□□□□ -0.58
DEPDC4-210ENST00000551642 FCF1Q9Y324 198 aaKnown RBP11.43□□□□□ -0.58
DEPDC4-210ENST00000551642 IQGAP2Q13576 1575 aa11.42□□□□□ -0.58
DEPDC4-210ENST00000551642 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
DEPDC4-210ENST00000551642 FDX1P10109 184 aa11.41□□□□□ -0.58
DEPDC4-210ENST00000551642 MS4A1P11836 297 aa11.41□□□□□ -0.58
DEPDC4-210ENST00000551642 GJA5P36382 358 aa11.41□□□□□ -0.58
DEPDC4-210ENST00000551642 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
DEPDC4-210ENST00000551642 RICTORQ6R327 1708 aa11.4□□□□□ -0.58
DEPDC4-210ENST00000551642 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PRR20EP86478 221 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PRR20CP86479 221 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PRR20DP86480 221 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PRR20BP86481 221 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PRR20AP86496 221 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PCDHGC3Q9UN70 934 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 IGF1RP08069 1367 aa11.39□□□□□ -0.59
DEPDC4-210ENST00000551642 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
DEPDC4-210ENST00000551642 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
DEPDC4-210ENST00000551642 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
DEPDC4-210ENST00000551642 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
DEPDC4-210ENST00000551642 UBAP1LF5GYI3 381 aa11.37□□□□□ -0.59
DEPDC4-210ENST00000551642 HSPA1LP34931 641 aa11.37□□□□□ -0.59
DEPDC4-210ENST00000551642 Q6ZNB5 142 aa11.37□□□□□ -0.59
DEPDC4-210ENST00000551642 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
DEPDC4-210ENST00000551642 TBC1D2Q9BYX2 928 aa11.36□□□□□ -0.59
DEPDC4-210ENST00000551642 GDF9O60383 454 aa11.35□□□□□ -0.59
DEPDC4-210ENST00000551642 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
DEPDC4-210ENST00000551642 PHLDB1Q86UU1 1377 aa11.35□□□□□ -0.59
DEPDC4-210ENST00000551642 ABCA8O94911 1581 aa11.34□□□□□ -0.59
DEPDC4-210ENST00000551642 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
DEPDC4-210ENST00000551642 JUNDP17535 347 aa11.34□□□□□ -0.59
DEPDC4-210ENST00000551642 NDUFV2P19404 249 aa11.34□□□□□ -0.59
DEPDC4-210ENST00000551642 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
DEPDC4-210ENST00000551642 FANCAO15360 1455 aa11.33□□□□□ -0.6
DEPDC4-210ENST00000551642 NEO1Q92859 1461 aa11.33□□□□□ -0.6
DEPDC4-210ENST00000551642 ZBTB24O43167 697 aaPredicted RBP11.33□□□□□ -0.6
DEPDC4-210ENST00000551642 UGGT2Q9NYU1 1516 aa11.33□□□□□ -0.6
DEPDC4-210ENST00000551642 ARHGEF12Q9NZN5 1544 aa11.33□□□□□ -0.6
DEPDC4-210ENST00000551642 SRCAPQ6ZRS2 3230 aa11.32□□□□□ -0.6
DEPDC4-210ENST00000551642 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms