RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 SLC4A3P48751 1232 aa27.25■■□□□ 1.95
NPAS3-210ENST00000551492 KDM5AP29375 1690 aaKnown RBP27.23■■□□□ 1.95
NPAS3-210ENST00000551492 MYOM1P52179 1685 aa27.23■■□□□ 1.95
NPAS3-210ENST00000551492 ARHGAP23Q9P227 1491 aa27.22■■□□□ 1.95
NPAS3-210ENST00000551492 A0A1W2PP64 1363 aa27.22■■□□□ 1.95
NPAS3-210ENST00000551492 NUTM2GQ5VZR2 741 aa27.2■■□□□ 1.95
NPAS3-210ENST00000551492 CALD1Q05682 793 aaKnown RBP27.2■■□□□ 1.94
NPAS3-210ENST00000551492 SLIT1O75093 1534 aa27.19■■□□□ 1.94
NPAS3-210ENST00000551492 PPP2R1AP30153 589 aa27.19■■□□□ 1.94
NPAS3-210ENST00000551492 MYBBP1AQ9BQG0 1328 aaKnown RBP27.19■■□□□ 1.94
NPAS3-210ENST00000551492 GTF2E1P29083 439 aaPredicted RBP27.18■■□□□ 1.94
NPAS3-210ENST00000551492 XPCQ01831 940 aaPredicted RBP27.18■■□□□ 1.94
NPAS3-210ENST00000551492 MORC1Q86VD1 984 aa27.18■■□□□ 1.94
NPAS3-210ENST00000551492 SBNO2Q9Y2G9 1366 aa27.18■■□□□ 1.94
NPAS3-210ENST00000551492 RALBP1Q15311 655 aa27.16■■□□□ 1.94
NPAS3-210ENST00000551492 NME9Q86XW9 330 aa27.15■■□□□ 1.94
NPAS3-210ENST00000551492 FRAT2O75474 233 aaPredicted RBP27.15■■□□□ 1.94
NPAS3-210ENST00000551492 PNISRQ8TF01 805 aaKnown RBP27.15■■□□□ 1.94
NPAS3-210ENST00000551492 PARD3Q8TEW0 1356 aa27.14■■□□□ 1.94
NPAS3-210ENST00000551492 MED14O60244 1454 aa27.12■■□□□ 1.93
NPAS3-210ENST00000551492 CCDC146Q8IYE0 955 aa27.12■■□□□ 1.93
NPAS3-210ENST00000551492 PROSER2Q86WR7 435 aaPredicted RBP27.12■■□□□ 1.93
NPAS3-210ENST00000551492 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.11■■□□□ 1.93
NPAS3-210ENST00000551492 FYB1O15117 783 aa27.11■■□□□ 1.93
NPAS3-210ENST00000551492 NLRP13Q86W25 1043 aa27.11■■□□□ 1.93
NPAS3-210ENST00000551492 NPHP4O75161 1426 aaPredicted RBP27.1■■□□□ 1.93
NPAS3-210ENST00000551492 CCDC61Q9Y6R9 512 aa27.1■■□□□ 1.93
NPAS3-210ENST00000551492 PPIP5K1Q6PFW1 1433 aa27.1■■□□□ 1.93
NPAS3-210ENST00000551492 DDX17Q92841 729 aaKnown RBP27.1■■□□□ 1.93
NPAS3-210ENST00000551492 PDE4AP27815 886 aa27.08■■□□□ 1.93
NPAS3-210ENST00000551492 TERF2IPQ9NYB0 399 aa27.08■■□□□ 1.93
NPAS3-210ENST00000551492 HDGFL2Q7Z4V5 671 aaPredicted RBP27.08■■□□□ 1.93
NPAS3-210ENST00000551492 ARXQ96QS3 562 aa27.08■■□□□ 1.93
NPAS3-210ENST00000551492 ADAMTS8Q9UP79 889 aa27.08■■□□□ 1.92
NPAS3-210ENST00000551492 MTHFSP49914 203 aa27.07■■□□□ 1.92
NPAS3-210ENST00000551492 ACEP12821 1306 aa27.07■■□□□ 1.92
NPAS3-210ENST00000551492 NGDNQ8NEJ9 315 aaKnown RBP27.06■■□□□ 1.92
NPAS3-210ENST00000551492 CGNL1Q0VF96 1302 aa27.05■■□□□ 1.92
NPAS3-210ENST00000551492 ORAI2Q96SN7 254 aa27.05■■□□□ 1.92
NPAS3-210ENST00000551492 CD163L1Q9NR16 1453 aa27.04■■□□□ 1.92
NPAS3-210ENST00000551492 ANKRD36BQ8N2N9 1353 aa27.04■■□□□ 1.92
NPAS3-210ENST00000551492 ESCO1Q5FWF5 840 aa27.03■■□□□ 1.92
NPAS3-210ENST00000551492 ATAD2Q6PL18 1390 aa27.03■■□□□ 1.92
NPAS3-210ENST00000551492 PDCL3Q9H2J4 239 aa27.03■■□□□ 1.92
NPAS3-210ENST00000551492 RRS1Q15050 365 aaKnown RBP27.02■■□□□ 1.92
NPAS3-210ENST00000551492 ZNF335Q9H4Z2 1342 aaPredicted RBP27.01■■□□□ 1.91
NPAS3-210ENST00000551492 ZHX1Q9UKY1 873 aaPredicted RBP27.01■■□□□ 1.91
NPAS3-210ENST00000551492 LMOD2Q6P5Q4 547 aa27.01■■□□□ 1.91
NPAS3-210ENST00000551492 CLCN1P35523 988 aa27■■□□□ 1.91
NPAS3-210ENST00000551492 RGPD8O14715 1765 aaPredicted RBP27■■□□□ 1.91
NPAS3-210ENST00000551492 NEUROD2Q15784 382 aa27■■□□□ 1.91
NPAS3-210ENST00000551492 FOXO3O43524 673 aa26.99■■□□□ 1.91
NPAS3-210ENST00000551492 TECPR2O15040 1411 aa26.98■■□□□ 1.91
NPAS3-210ENST00000551492 FAM135BQ49AJ0 1406 aa26.98■■□□□ 1.91
NPAS3-210ENST00000551492 DLC1Q96QB1 1528 aa26.96■■□□□ 1.91
NPAS3-210ENST00000551492 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
NPAS3-210ENST00000551492 BACH2Q9BYV9 841 aa26.96■■□□□ 1.91
NPAS3-210ENST00000551492 EMILIN1Q9Y6C2 1016 aa26.96■■□□□ 1.91
NPAS3-210ENST00000551492 RRP7AQ9Y3A4 280 aaKnown RBP26.94■■□□□ 1.9
NPAS3-210ENST00000551492 CANXP27824 592 aaKnown RBP26.94■■□□□ 1.9
NPAS3-210ENST00000551492 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
NPAS3-210ENST00000551492 CPS1P31327 1500 aa26.94■■□□□ 1.9
NPAS3-210ENST00000551492 ATP7BP35670 1465 aa26.93■■□□□ 1.9
NPAS3-210ENST00000551492 ZNF142P52746 1687 aaPredicted RBP26.93■■□□□ 1.9
NPAS3-210ENST00000551492 WDR43Q15061 677 aaKnown RBP eCLIP26.93■■□□□ 1.9
NPAS3-210ENST00000551492 U2SURPO15042 1029 aaKnown RBP26.93■■□□□ 1.9
NPAS3-210ENST00000551492 SIRT1Q96EB6 747 aa26.93■■□□□ 1.9
NPAS3-210ENST00000551492 LMTK3Q96Q04 1460 aa26.92■■□□□ 1.9
NPAS3-210ENST00000551492 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
NPAS3-210ENST00000551492 PLCD3Q8N3E9 789 aa26.9■■□□□ 1.9
NPAS3-210ENST00000551492 CDCA7LQ96GN5 454 aa26.9■■□□□ 1.9
NPAS3-210ENST00000551492 TMEM94Q12767 1356 aa26.88■■□□□ 1.89
NPAS3-210ENST00000551492 TTC21BQ7Z4L5 1316 aa26.86■■□□□ 1.89
NPAS3-210ENST00000551492 PUS7Q96PZ0 661 aaKnown RBP26.85■■□□□ 1.89
NPAS3-210ENST00000551492 CHD2O14647 1828 aaKnown RBP26.85■■□□□ 1.89
NPAS3-210ENST00000551492 IPO4Q8TEX9 1081 aaKnown RBP26.85■■□□□ 1.89
NPAS3-210ENST00000551492 DDRGK1Q96HY6 314 aa26.85■■□□□ 1.89
NPAS3-210ENST00000551492 DIP2AQ14689 1571 aa26.85■■□□□ 1.89
NPAS3-210ENST00000551492 PHF8Q9UPP1 1060 aa26.85■■□□□ 1.89
NPAS3-210ENST00000551492 APAF1O14727 1248 aa26.84■■□□□ 1.89
NPAS3-210ENST00000551492 U2AF1L5P0DN76 240 aaPredicted RBP26.84■■□□□ 1.89
NPAS3-210ENST00000551492 U2AF1Q01081 240 aaKnown RBP eCLIP26.84■■□□□ 1.89
NPAS3-210ENST00000551492 NLRP6P59044 892 aa26.83■■□□□ 1.89
NPAS3-210ENST00000551492 DHX37Q8IY37 1157 aaKnown RBP26.83■■□□□ 1.89
NPAS3-210ENST00000551492 PTCH1Q13635 1447 aa26.83■■□□□ 1.89
NPAS3-210ENST00000551492 PSME1Q06323 249 aa26.83■■□□□ 1.89
NPAS3-210ENST00000551492 COG3Q96JB2 828 aa26.83■■□□□ 1.89
NPAS3-210ENST00000551492 POLKQ9UBT6 870 aa26.83■■□□□ 1.89
NPAS3-210ENST00000551492 HMOX1P09601 288 aa26.82■■□□□ 1.88
NPAS3-210ENST00000551492 SKAP1Q86WV1 359 aa26.82■■□□□ 1.88
NPAS3-210ENST00000551492 ABTB2Q8N961 1025 aa26.82■■□□□ 1.88
NPAS3-210ENST00000551492 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
NPAS3-210ENST00000551492 XRN1Q8IZH2 1706 aaKnown RBP26.82■■□□□ 1.88
NPAS3-210ENST00000551492 ARID3AQ99856 593 aa26.81■■□□□ 1.88
NPAS3-210ENST00000551492 CPSF1Q10570 1443 aaKnown RBP26.81■■□□□ 1.88
NPAS3-210ENST00000551492 TCERG1O14776 1098 aaKnown RBP26.81■■□□□ 1.88
NPAS3-210ENST00000551492 PANK2Q9BZ23 570 aa26.81■■□□□ 1.88
NPAS3-210ENST00000551492 VGLL3A8MV65 326 aa26.8■■□□□ 1.88
NPAS3-210ENST00000551492 PRDM10Q9NQV6 1147 aa26.8■■□□□ 1.88
NPAS3-210ENST00000551492 PLEKHG3A1L390 1219 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms