RNA–Protein interactions for RNA: ENST00000551304.5

SYT1-209, Transcript of synaptotagmin 1, humanhuman

TSL 3

Gene SYT1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-209ENST00000551304 SYNMO15061 1565 aa12.37□□□□□ -0.43
SYT1-209ENST00000551304 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
SYT1-209ENST00000551304 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
SYT1-209ENST00000551304 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
SYT1-209ENST00000551304 NUP155O75694 1391 aa12.35□□□□□ -0.43
SYT1-209ENST00000551304 ADGRB3O60242 1522 aa12.35□□□□□ -0.43
SYT1-209ENST00000551304 RPRD2Q5VT52 1461 aaKnown RBP12.34□□□□□ -0.43
SYT1-209ENST00000551304 ROCK1Q13464 1354 aa12.34□□□□□ -0.43
SYT1-209ENST00000551304 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
SYT1-209ENST00000551304 TBC1D12O60347 775 aa12.33□□□□□ -0.44
SYT1-209ENST00000551304 PPP1R37O75864 691 aa12.33□□□□□ -0.44
SYT1-209ENST00000551304 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.44
SYT1-209ENST00000551304 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
SYT1-209ENST00000551304 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.32□□□□□ -0.44
SYT1-209ENST00000551304 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
SYT1-209ENST00000551304 TET3O43151 1660 aa12.32□□□□□ -0.44
SYT1-209ENST00000551304 KDM5AP29375 1690 aaKnown RBP12.32□□□□□ -0.44
SYT1-209ENST00000551304 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
SYT1-209ENST00000551304 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
SYT1-209ENST00000551304 FOXK1P85037 733 aa12.3□□□□□ -0.44
SYT1-209ENST00000551304 MSH6P52701 1360 aa12.3□□□□□ -0.44
SYT1-209ENST00000551304 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
SYT1-209ENST00000551304 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
SYT1-209ENST00000551304 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
SYT1-209ENST00000551304 UNC13BO14795 1591 aa12.29□□□□□ -0.44
SYT1-209ENST00000551304 FAM135BQ49AJ0 1406 aa12.28□□□□□ -0.44
SYT1-209ENST00000551304 ZNF326Q5BKZ1 582 aaKnown RBP12.28□□□□□ -0.44
SYT1-209ENST00000551304 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
SYT1-209ENST00000551304 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.44
SYT1-209ENST00000551304 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
SYT1-209ENST00000551304 SLAIN2Q9P270 581 aa12.27□□□□□ -0.45
SYT1-209ENST00000551304 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
SYT1-209ENST00000551304 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
SYT1-209ENST00000551304 E9PCH4 1651 aa12.26□□□□□ -0.45
SYT1-209ENST00000551304 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
SYT1-209ENST00000551304 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
SYT1-209ENST00000551304 IQGAP3Q86VI3 1631 aa12.25□□□□□ -0.45
SYT1-209ENST00000551304 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
SYT1-209ENST00000551304 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
SYT1-209ENST00000551304 ATF3P18847 181 aa12.23□□□□□ -0.45
SYT1-209ENST00000551304 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
SYT1-209ENST00000551304 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
SYT1-209ENST00000551304 ADAMTS13Q76LX8 1427 aa12.22□□□□□ -0.45
SYT1-209ENST00000551304 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
SYT1-209ENST00000551304 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
SYT1-209ENST00000551304 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
SYT1-209ENST00000551304 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
SYT1-209ENST00000551304 ROBO1Q9Y6N7 1651 aa12.21□□□□□ -0.45
SYT1-209ENST00000551304 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.46
SYT1-209ENST00000551304 PIK3R4Q99570 1358 aa12.2□□□□□ -0.46
SYT1-209ENST00000551304 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
SYT1-209ENST00000551304 DSG2Q14126 1118 aa12.18□□□□□ -0.46
SYT1-209ENST00000551304 NAIPQ13075 1403 aa12.18□□□□□ -0.46
SYT1-209ENST00000551304 NCOA3Q9Y6Q9 1424 aa12.18□□□□□ -0.46
SYT1-209ENST00000551304 POTEAQ6S8J7 498 aa12.17□□□□□ -0.46
SYT1-209ENST00000551304 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
SYT1-209ENST00000551304 PTPRUQ92729 1446 aa12.17□□□□□ -0.46
SYT1-209ENST00000551304 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
SYT1-209ENST00000551304 JCADQ9P266 1359 aa12.17□□□□□ -0.46
SYT1-209ENST00000551304 TRPM2O94759 1503 aa12.16□□□□□ -0.46
SYT1-209ENST00000551304 TK2O00142 265 aa12.16□□□□□ -0.46
SYT1-209ENST00000551304 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
SYT1-209ENST00000551304 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
SYT1-209ENST00000551304 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
SYT1-209ENST00000551304 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
SYT1-209ENST00000551304 PHLPP1O60346 1717 aa12.14□□□□□ -0.47
SYT1-209ENST00000551304 METP08581 1390 aa12.14□□□□□ -0.47
SYT1-209ENST00000551304 PDE4AP27815 886 aa12.13□□□□□ -0.47
SYT1-209ENST00000551304 BRINP3Q76B58 766 aa12.13□□□□□ -0.47
SYT1-209ENST00000551304 HCSTQ9UBK5 93 aa12.13□□□□□ -0.47
SYT1-209ENST00000551304 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
SYT1-209ENST00000551304 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
SYT1-209ENST00000551304 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
SYT1-209ENST00000551304 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
SYT1-209ENST00000551304 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
SYT1-209ENST00000551304 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
SYT1-209ENST00000551304 SETBP1Q9Y6X0 1596 aa12.11□□□□□ -0.47
SYT1-209ENST00000551304 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
SYT1-209ENST00000551304 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
SYT1-209ENST00000551304 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
SYT1-209ENST00000551304 NRXN3Q9Y4C0 1643 aa12.1□□□□□ -0.47
SYT1-209ENST00000551304 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
SYT1-209ENST00000551304 RGL3Q3MIN7 710 aa12.09□□□□□ -0.47
SYT1-209ENST00000551304 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
SYT1-209ENST00000551304 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
SYT1-209ENST00000551304 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
SYT1-209ENST00000551304 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
SYT1-209ENST00000551304 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
SYT1-209ENST00000551304 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
SYT1-209ENST00000551304 KIF1BO60333 1816 aa12.08□□□□□ -0.48
SYT1-209ENST00000551304 DCCP43146 1447 aa12.07□□□□□ -0.48
SYT1-209ENST00000551304 MST1RQ04912 1400 aa12.07□□□□□ -0.48
SYT1-209ENST00000551304 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
SYT1-209ENST00000551304 XRN1Q8IZH2 1706 aaKnown RBP12.06□□□□□ -0.48
SYT1-209ENST00000551304 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
SYT1-209ENST00000551304 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
SYT1-209ENST00000551304 MPHOSPH9Q99550 1183 aa12.06□□□□□ -0.48
SYT1-209ENST00000551304 AHDC1Q5TGY3 1603 aaPredicted RBP12.06□□□□□ -0.48
SYT1-209ENST00000551304 LRP6O75581 1613 aa12.05□□□□□ -0.48
SYT1-209ENST00000551304 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms