RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 NEURL4Q96JN8 1562 aa10.51□□□□□ -0.73
KRR1-204ENST00000550898 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
KRR1-204ENST00000550898 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
KRR1-204ENST00000550898 PPP1R15AO75807 674 aaPredicted RBP10.49□□□□□ -0.73
KRR1-204ENST00000550898 HRCP23327 699 aa10.49□□□□□ -0.73
KRR1-204ENST00000550898 LTKP29376 864 aa10.49□□□□□ -0.73
KRR1-204ENST00000550898 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.49□□□□□ -0.73
KRR1-204ENST00000550898 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
KRR1-204ENST00000550898 POLR1AO95602 1720 aaPredicted RBP10.49□□□□□ -0.73
KRR1-204ENST00000550898 RIMS2Q9UQ26 1411 aa10.49□□□□□ -0.73
KRR1-204ENST00000550898 ZNF335Q9H4Z2 1342 aaPredicted RBP10.48□□□□□ -0.73
KRR1-204ENST00000550898 ZFYVE9O95405 1425 aa10.48□□□□□ -0.73
KRR1-204ENST00000550898 TMEM131LA2VDJ0 1609 aa10.47□□□□□ -0.73
KRR1-204ENST00000550898 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
KRR1-204ENST00000550898 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
KRR1-204ENST00000550898 CCDC144AA2RUR9 1427 aa10.47□□□□□ -0.73
KRR1-204ENST00000550898 IQGAP1P46940 1657 aa10.47□□□□□ -0.73
KRR1-204ENST00000550898 ZNF326Q5BKZ1 582 aaKnown RBP10.46□□□□□ -0.73
KRR1-204ENST00000550898 BCANQ96GW7 911 aa10.46□□□□□ -0.73
KRR1-204ENST00000550898 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.74
KRR1-204ENST00000550898 CLTCL1P53675 1640 aa10.45□□□□□ -0.74
KRR1-204ENST00000550898 CFAP65Q6ZU64 1925 aaKnown RBP10.45□□□□□ -0.74
KRR1-204ENST00000550898 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
KRR1-204ENST00000550898 CPS1P31327 1500 aa10.44□□□□□ -0.74
KRR1-204ENST00000550898 IQSEC2Q5JU85 1478 aa10.43□□□□□ -0.74
KRR1-204ENST00000550898 TRIM26Q12899 539 aaPredicted RBP10.43□□□□□ -0.74
KRR1-204ENST00000550898 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
KRR1-204ENST00000550898 PBX2P40425 430 aa10.42□□□□□ -0.74
KRR1-204ENST00000550898 PSEN2P49810 448 aa10.42□□□□□ -0.74
KRR1-204ENST00000550898 FBXO41Q8TF61 875 aa10.42□□□□□ -0.74
KRR1-204ENST00000550898 SLC26A8Q96RN1 970 aa10.42□□□□□ -0.74
KRR1-204ENST00000550898 RPGRIP1LQ68CZ1 1315 aa10.41□□□□□ -0.74
KRR1-204ENST00000550898 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
KRR1-204ENST00000550898 CRISPLD2Q9H0B8 497 aa10.41□□□□□ -0.74
KRR1-204ENST00000550898 DIP2AQ14689 1571 aa10.4□□□□□ -0.74
KRR1-204ENST00000550898 NEXMIFQ5QGS0 1516 aa10.39□□□□□ -0.75
KRR1-204ENST00000550898 GTPBP6O43824 516 aaPredicted RBP10.39□□□□□ -0.75
KRR1-204ENST00000550898 PTGER2P43116 358 aa10.39□□□□□ -0.75
KRR1-204ENST00000550898 TBX22Q9Y458 520 aa10.39□□□□□ -0.75
KRR1-204ENST00000550898 ADAMTS13Q76LX8 1427 aa10.39□□□□□ -0.75
KRR1-204ENST00000550898 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
KRR1-204ENST00000550898 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
KRR1-204ENST00000550898 KCNA6P17658 529 aa10.38□□□□□ -0.75
KRR1-204ENST00000550898 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
KRR1-204ENST00000550898 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
KRR1-204ENST00000550898 SPATA31E1Q6ZUB1 1445 aa10.38□□□□□ -0.75
KRR1-204ENST00000550898 ANKRD30BQ9BXX2 1392 aa10.38□□□□□ -0.75
KRR1-204ENST00000550898 NKTRP30414 1462 aaKnown RBP10.37□□□□□ -0.75
KRR1-204ENST00000550898 RGL3Q3MIN7 710 aa10.37□□□□□ -0.75
KRR1-204ENST00000550898 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
KRR1-204ENST00000550898 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
KRR1-204ENST00000550898 NWD1Q149M9 1564 aa10.36□□□□□ -0.75
KRR1-204ENST00000550898 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
KRR1-204ENST00000550898 LRRC7Q96NW7 1537 aa10.36□□□□□ -0.75
KRR1-204ENST00000550898 KIF1BO60333 1816 aa10.35□□□□□ -0.75
KRR1-204ENST00000550898 UBAP1LF5GYI3 381 aa10.35□□□□□ -0.75
KRR1-204ENST00000550898 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
KRR1-204ENST00000550898 HRO43593 1189 aa10.34□□□□□ -0.75
KRR1-204ENST00000550898 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
KRR1-204ENST00000550898 TOM1O60784 492 aa10.34□□□□□ -0.75
KRR1-204ENST00000550898 BBXQ8WY36 941 aaPredicted RBP10.34□□□□□ -0.75
KRR1-204ENST00000550898 TMEM94Q12767 1356 aa10.34□□□□□ -0.75
KRR1-204ENST00000550898 PPP1R15BQ5SWA1 713 aa10.33□□□□□ -0.76
KRR1-204ENST00000550898 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
KRR1-204ENST00000550898 ADGRF5Q8IZF2 1346 aa10.33□□□□□ -0.76
KRR1-204ENST00000550898 MYOM2P54296 1465 aa10.32□□□□□ -0.76
KRR1-204ENST00000550898 METP08581 1390 aa10.32□□□□□ -0.76
KRR1-204ENST00000550898 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
KRR1-204ENST00000550898 NRXN3Q9Y4C0 1643 aa10.32□□□□□ -0.76
KRR1-204ENST00000550898 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
KRR1-204ENST00000550898 PTPRUQ92729 1446 aa10.31□□□□□ -0.76
KRR1-204ENST00000550898 NCOA3Q9Y6Q9 1424 aa10.31□□□□□ -0.76
KRR1-204ENST00000550898 MSH6P52701 1360 aa10.3□□□□□ -0.76
KRR1-204ENST00000550898 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
KRR1-204ENST00000550898 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
KRR1-204ENST00000550898 STAC3Q96MF2 364 aa10.3□□□□□ -0.76
KRR1-204ENST00000550898 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 STRCP1A6NGW2 1772 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 PPLO60437 1756 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
KRR1-204ENST00000550898 PLCB2Q00722 1185 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 PTCH1Q13635 1447 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 NRXN1Q9ULB1 1477 aa10.29□□□□□ -0.76
KRR1-204ENST00000550898 PRAG1Q86YV5 1406 aa10.28□□□□□ -0.76
KRR1-204ENST00000550898 PIP4K2BP78356 416 aa10.28□□□□□ -0.76
KRR1-204ENST00000550898 DCAF11Q8TEB1 546 aa10.28□□□□□ -0.76
KRR1-204ENST00000550898 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
KRR1-204ENST00000550898 TK2O00142 265 aa10.27□□□□□ -0.77
KRR1-204ENST00000550898 TBC1D12O60347 775 aa10.27□□□□□ -0.77
KRR1-204ENST00000550898 PAXIP1Q6ZW49 1069 aaPredicted RBP10.27□□□□□ -0.77
KRR1-204ENST00000550898 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
KRR1-204ENST00000550898 XRN1Q8IZH2 1706 aaKnown RBP10.27□□□□□ -0.77
KRR1-204ENST00000550898 IFT172Q9UG01 1749 aa10.27□□□□□ -0.77
KRR1-204ENST00000550898 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
KRR1-204ENST00000550898 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
KRR1-204ENST00000550898 C14orf93Q9H972 538 aaKnown RBP10.26□□□□□ -0.77
KRR1-204ENST00000550898 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms