RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 KIF20BQ96Q89 1820 aa12.24□□□□□ -0.45
TMEM116-213ENST00000550831 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
TMEM116-213ENST00000550831 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
TMEM116-213ENST00000550831 CDC42BPGQ6DT37 1551 aa12.23□□□□□ -0.45
TMEM116-213ENST00000550831 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
TMEM116-213ENST00000550831 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
TMEM116-213ENST00000550831 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
TMEM116-213ENST00000550831 THEMISQ8N1K5 641 aaPredicted RBP12.23□□□□□ -0.45
TMEM116-213ENST00000550831 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
TMEM116-213ENST00000550831 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
TMEM116-213ENST00000550831 PTCH1Q13635 1447 aa12.22□□□□□ -0.45
TMEM116-213ENST00000550831 WASLO00401 505 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-213ENST00000550831 LTKP29376 864 aa12.22□□□□□ -0.45
TMEM116-213ENST00000550831 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
TMEM116-213ENST00000550831 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-213ENST00000550831 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
TMEM116-213ENST00000550831 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-213ENST00000550831 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.45
TMEM116-213ENST00000550831 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-213ENST00000550831 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.45
TMEM116-213ENST00000550831 PIK3R4Q99570 1358 aa12.21□□□□□ -0.45
TMEM116-213ENST00000550831 AKAP12Q02952 1782 aa12.21□□□□□ -0.45
TMEM116-213ENST00000550831 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.46
TMEM116-213ENST00000550831 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
TMEM116-213ENST00000550831 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMEM116-213ENST00000550831 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
TMEM116-213ENST00000550831 TXNDC2Q86VQ3 553 aa12.2□□□□□ -0.46
TMEM116-213ENST00000550831 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
TMEM116-213ENST00000550831 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-213ENST00000550831 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
TMEM116-213ENST00000550831 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
TMEM116-213ENST00000550831 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
TMEM116-213ENST00000550831 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
TMEM116-213ENST00000550831 COL3A1P02461 1466 aaPredicted RBP12.18□□□□□ -0.46
TMEM116-213ENST00000550831 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
TMEM116-213ENST00000550831 FYB1O15117 783 aa12.18□□□□□ -0.46
TMEM116-213ENST00000550831 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
TMEM116-213ENST00000550831 LRRC7Q96NW7 1537 aa12.17□□□□□ -0.46
TMEM116-213ENST00000550831 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
TMEM116-213ENST00000550831 PROM2Q8N271 834 aa12.17□□□□□ -0.46
TMEM116-213ENST00000550831 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
TMEM116-213ENST00000550831 CABP1Q9NZU7 370 aa12.17□□□□□ -0.46
TMEM116-213ENST00000550831 PPIP5K1Q6PFW1 1433 aa12.16□□□□□ -0.46
TMEM116-213ENST00000550831 TRMT2AQ8IZ69 625 aaKnown RBP12.16□□□□□ -0.46
TMEM116-213ENST00000550831 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
TMEM116-213ENST00000550831 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
TMEM116-213ENST00000550831 NRKQ7Z2Y5 1582 aa12.15□□□□□ -0.46
TMEM116-213ENST00000550831 MTHFSP49914 203 aa12.15□□□□□ -0.46
TMEM116-213ENST00000550831 NUDT16Q96DE0 195 aaKnown RBP12.14□□□□□ -0.47
TMEM116-213ENST00000550831 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
TMEM116-213ENST00000550831 CHD2O14647 1828 aaKnown RBP12.13□□□□□ -0.47
TMEM116-213ENST00000550831 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
TMEM116-213ENST00000550831 CCDC27Q2M243 656 aa12.13□□□□□ -0.47
TMEM116-213ENST00000550831 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
TMEM116-213ENST00000550831 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
TMEM116-213ENST00000550831 RCAN3Q9UKA8 241 aa12.12□□□□□ -0.47
TMEM116-213ENST00000550831 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 BCANQ96GW7 911 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 GGNBP2Q9H3C7 697 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 AMOTL2Q9Y2J4 779 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 PRR36Q9H6K5 1346 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 APAF1O14727 1248 aa12.11□□□□□ -0.47
TMEM116-213ENST00000550831 RRP1P56182 461 aaKnown RBP12.11□□□□□ -0.47
TMEM116-213ENST00000550831 SSH2Q76I76 1423 aa12.1□□□□□ -0.47
TMEM116-213ENST00000550831 CDK12Q9NYV4 1490 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-213ENST00000550831 NALCNQ8IZF0 1738 aa12.1□□□□□ -0.47
TMEM116-213ENST00000550831 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
TMEM116-213ENST00000550831 XIRP1Q702N8 1843 aaKnown RBP12.09□□□□□ -0.47
TMEM116-213ENST00000550831 E9PSI1 815 aa12.09□□□□□ -0.47
TMEM116-213ENST00000550831 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
TMEM116-213ENST00000550831 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.48
TMEM116-213ENST00000550831 USP54Q70EL1 1684 aa12.08□□□□□ -0.48
TMEM116-213ENST00000550831 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
TMEM116-213ENST00000550831 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
TMEM116-213ENST00000550831 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
TMEM116-213ENST00000550831 USP6P35125 1406 aa12.07□□□□□ -0.48
TMEM116-213ENST00000550831 TNNT2P45379 298 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-213ENST00000550831 WWC1Q8IX03 1113 aa12.07□□□□□ -0.48
TMEM116-213ENST00000550831 CCDC146Q8IYE0 955 aa12.07□□□□□ -0.48
TMEM116-213ENST00000550831 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
TMEM116-213ENST00000550831 SALL2Q9Y467 1007 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-213ENST00000550831 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
TMEM116-213ENST00000550831 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
TMEM116-213ENST00000550831 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-213ENST00000550831 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
TMEM116-213ENST00000550831 POLKQ9UBT6 870 aa12.06□□□□□ -0.48
TMEM116-213ENST00000550831 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
TMEM116-213ENST00000550831 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
TMEM116-213ENST00000550831 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
TMEM116-213ENST00000550831 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-213ENST00000550831 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
TMEM116-213ENST00000550831 TTC21AQ8NDW8 1320 aa12.05□□□□□ -0.48
TMEM116-213ENST00000550831 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
TMEM116-213ENST00000550831 ACEP12821 1306 aa12.04□□□□□ -0.48
TMEM116-213ENST00000550831 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
TMEM116-213ENST00000550831 FCHSD2O94868 740 aa12.03□□□□□ -0.48
TMEM116-213ENST00000550831 COG3Q96JB2 828 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms