RNA–Protein interactions for RNA: ENST00000550802.1

PFKM-220, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-220ENST00000550802 PPIP5K1Q6PFW1 1433 aa12.15□□□□□ -0.46
PFKM-220ENST00000550802 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
PFKM-220ENST00000550802 CABP1Q9NZU7 370 aa12.15□□□□□ -0.46
PFKM-220ENST00000550802 SLAIN2Q9P270 581 aa12.15□□□□□ -0.46
PFKM-220ENST00000550802 MSH6P52701 1360 aa12.15□□□□□ -0.46
PFKM-220ENST00000550802 SHPRHQ149N8 1683 aa12.14□□□□□ -0.47
PFKM-220ENST00000550802 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
PFKM-220ENST00000550802 TNNT2P45379 298 aaPredicted RBP12.13□□□□□ -0.47
PFKM-220ENST00000550802 MTHFSP49914 203 aa12.13□□□□□ -0.47
PFKM-220ENST00000550802 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
PFKM-220ENST00000550802 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
PFKM-220ENST00000550802 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
PFKM-220ENST00000550802 MON2Q7Z3U7 1717 aa12.13□□□□□ -0.47
PFKM-220ENST00000550802 RNF123Q5XPI4 1314 aa12.12□□□□□ -0.47
PFKM-220ENST00000550802 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
PFKM-220ENST00000550802 CHD2O14647 1828 aaKnown RBP12.12□□□□□ -0.47
PFKM-220ENST00000550802 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
PFKM-220ENST00000550802 RCAN3Q9UKA8 241 aa12.12□□□□□ -0.47
PFKM-220ENST00000550802 ROBO2Q9HCK4 1378 aa12.12□□□□□ -0.47
PFKM-220ENST00000550802 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
PFKM-220ENST00000550802 CPSF1Q10570 1443 aaKnown RBP12.11□□□□□ -0.47
PFKM-220ENST00000550802 XRN1Q8IZH2 1706 aaKnown RBP12.11□□□□□ -0.47
PFKM-220ENST00000550802 JCADQ9P266 1359 aa12.11□□□□□ -0.47
PFKM-220ENST00000550802 GOLGA2Q08379 1002 aa12.11□□□□□ -0.47
PFKM-220ENST00000550802 RUNDC1Q96C34 613 aa12.11□□□□□ -0.47
PFKM-220ENST00000550802 PNNQ9H307 717 aaKnown RBP12.11□□□□□ -0.47
PFKM-220ENST00000550802 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
PFKM-220ENST00000550802 FYB1O15117 783 aa12.1□□□□□ -0.47
PFKM-220ENST00000550802 NCBP3Q53F19 620 aaKnown RBP12.1□□□□□ -0.47
PFKM-220ENST00000550802 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
PFKM-220ENST00000550802 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
PFKM-220ENST00000550802 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
PFKM-220ENST00000550802 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
PFKM-220ENST00000550802 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.47
PFKM-220ENST00000550802 E9PSI1 815 aa12.08□□□□□ -0.48
PFKM-220ENST00000550802 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
PFKM-220ENST00000550802 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
PFKM-220ENST00000550802 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
PFKM-220ENST00000550802 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
PFKM-220ENST00000550802 APAF1O14727 1248 aa12.07□□□□□ -0.48
PFKM-220ENST00000550802 RRP1P56182 461 aaKnown RBP12.07□□□□□ -0.48
PFKM-220ENST00000550802 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
PFKM-220ENST00000550802 COG3Q96JB2 828 aa12.07□□□□□ -0.48
PFKM-220ENST00000550802 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
PFKM-220ENST00000550802 SPATA31A6Q5VVP1 1343 aa12.07□□□□□ -0.48
PFKM-220ENST00000550802 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
PFKM-220ENST00000550802 NEFMP07197 916 aa12.06□□□□□ -0.48
PFKM-220ENST00000550802 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
PFKM-220ENST00000550802 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
PFKM-220ENST00000550802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.06□□□□□ -0.48
PFKM-220ENST00000550802 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.06□□□□□ -0.48
PFKM-220ENST00000550802 COL16A1Q07092 1604 aaPredicted RBP12.06□□□□□ -0.48
PFKM-220ENST00000550802 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
PFKM-220ENST00000550802 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
PFKM-220ENST00000550802 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
PFKM-220ENST00000550802 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
PFKM-220ENST00000550802 CDCA7LQ96GN5 454 aa12.05□□□□□ -0.48
PFKM-220ENST00000550802 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
PFKM-220ENST00000550802 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
PFKM-220ENST00000550802 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
PFKM-220ENST00000550802 ATF3P18847 181 aa12.04□□□□□ -0.48
PFKM-220ENST00000550802 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
PFKM-220ENST00000550802 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
PFKM-220ENST00000550802 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
PFKM-220ENST00000550802 C14orf37Q86TY3 774 aa12.04□□□□□ -0.48
PFKM-220ENST00000550802 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
PFKM-220ENST00000550802 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
PFKM-220ENST00000550802 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
PFKM-220ENST00000550802 AHDC1Q5TGY3 1603 aaPredicted RBP12.03□□□□□ -0.48
PFKM-220ENST00000550802 U2SURPO15042 1029 aaKnown RBP12.02□□□□□ -0.49
PFKM-220ENST00000550802 KCNA4P22459 653 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 WDR63Q8IWG1 891 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 TCP11L2Q8N4U5 519 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 ACEP12821 1306 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 USP6P35125 1406 aa12.02□□□□□ -0.49
PFKM-220ENST00000550802 LRP6O75581 1613 aa12.01□□□□□ -0.49
PFKM-220ENST00000550802 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
PFKM-220ENST00000550802 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
PFKM-220ENST00000550802 NME9Q86XW9 330 aa12□□□□□ -0.49
PFKM-220ENST00000550802 WWC1Q8IX03 1113 aa12□□□□□ -0.49
PFKM-220ENST00000550802 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
PFKM-220ENST00000550802 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
PFKM-220ENST00000550802 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
PFKM-220ENST00000550802 TTC21BQ7Z4L5 1316 aa12□□□□□ -0.49
PFKM-220ENST00000550802 ADGRL3Q9HAR2 1447 aa12□□□□□ -0.49
PFKM-220ENST00000550802 FCHSD2O94868 740 aa11.99□□□□□ -0.49
PFKM-220ENST00000550802 BRINP3Q76B58 766 aa11.99□□□□□ -0.49
PFKM-220ENST00000550802 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
PFKM-220ENST00000550802 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
PFKM-220ENST00000550802 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
PFKM-220ENST00000550802 DCCP43146 1447 aa11.99□□□□□ -0.49
PFKM-220ENST00000550802 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
PFKM-220ENST00000550802 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
PFKM-220ENST00000550802 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
PFKM-220ENST00000550802 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
PFKM-220ENST00000550802 RXRBP28702 533 aa11.97□□□□□ -0.49
PFKM-220ENST00000550802 IL16Q14005 1332 aa11.96□□□□□ -0.49
PFKM-220ENST00000550802 CALD1Q05682 793 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms