RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 BAP1Q92560 729 aa12.14□□□□□ -0.47
GNPTAB-208ENST00000550718 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
GNPTAB-208ENST00000550718 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
GNPTAB-208ENST00000550718 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
GNPTAB-208ENST00000550718 CTHP32929 405 aa12.12□□□□□ -0.47
GNPTAB-208ENST00000550718 HELBQ8NG08 1087 aaPredicted RBP12.12□□□□□ -0.47
GNPTAB-208ENST00000550718 POTECB2RU33 542 aa12.11□□□□□ -0.47
GNPTAB-208ENST00000550718 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
GNPTAB-208ENST00000550718 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
GNPTAB-208ENST00000550718 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
GNPTAB-208ENST00000550718 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
GNPTAB-208ENST00000550718 HPS1Q92902 700 aa12.09□□□□□ -0.47
GNPTAB-208ENST00000550718 PLEKHG3A1L390 1219 aa12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 MAP10Q9P2G4 905 aa12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
GNPTAB-208ENST00000550718 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
GNPTAB-208ENST00000550718 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
GNPTAB-208ENST00000550718 WASF2Q9Y6W5 498 aa12.06□□□□□ -0.48
GNPTAB-208ENST00000550718 TSC1Q92574 1164 aa12.05□□□□□ -0.48
GNPTAB-208ENST00000550718 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
GNPTAB-208ENST00000550718 ATP13A2Q9NQ11 1180 aa12.05□□□□□ -0.48
GNPTAB-208ENST00000550718 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
GNPTAB-208ENST00000550718 FAM174AQ8TBP5 190 aa12.04□□□□□ -0.48
GNPTAB-208ENST00000550718 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
GNPTAB-208ENST00000550718 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.49
GNPTAB-208ENST00000550718 CDK15Q96Q40 435 aa12.02□□□□□ -0.49
GNPTAB-208ENST00000550718 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
GNPTAB-208ENST00000550718 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
GNPTAB-208ENST00000550718 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
GNPTAB-208ENST00000550718 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
GNPTAB-208ENST00000550718 GOPCQ9HD26 462 aa12□□□□□ -0.49
GNPTAB-208ENST00000550718 TLL2Q9Y6L7 1015 aa12□□□□□ -0.49
GNPTAB-208ENST00000550718 FOXJ1Q92949 421 aa11.99□□□□□ -0.49
GNPTAB-208ENST00000550718 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
GNPTAB-208ENST00000550718 TRIM47Q96LD4 638 aa11.99□□□□□ -0.49
GNPTAB-208ENST00000550718 SH3RF1Q7Z6J0 888 aa11.98□□□□□ -0.49
GNPTAB-208ENST00000550718 ADH1CP00326 375 aa11.97□□□□□ -0.49
GNPTAB-208ENST00000550718 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
GNPTAB-208ENST00000550718 CAPN5O15484 640 aaPredicted RBP11.96□□□□□ -0.49
GNPTAB-208ENST00000550718 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.49
GNPTAB-208ENST00000550718 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
GNPTAB-208ENST00000550718 NNTQ13423 1086 aa11.95□□□□□ -0.5
GNPTAB-208ENST00000550718 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
GNPTAB-208ENST00000550718 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
GNPTAB-208ENST00000550718 NR5A1Q13285 461 aa11.94□□□□□ -0.5
GNPTAB-208ENST00000550718 AGERQ15109 404 aa11.94□□□□□ -0.5
GNPTAB-208ENST00000550718 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
GNPTAB-208ENST00000550718 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
GNPTAB-208ENST00000550718 MAP4K5Q9Y4K4 846 aa11.93□□□□□ -0.5
GNPTAB-208ENST00000550718 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
GNPTAB-208ENST00000550718 KLF16Q9BXK1 252 aaPredicted RBP11.92□□□□□ -0.5
GNPTAB-208ENST00000550718 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
GNPTAB-208ENST00000550718 TREML4Q6UXN2 200 aa11.91□□□□□ -0.5
GNPTAB-208ENST00000550718 GRM5P41594 1212 aa11.9□□□□□ -0.5
GNPTAB-208ENST00000550718 LCE2AQ5TA79 106 aaPredicted RBP11.9□□□□□ -0.5
GNPTAB-208ENST00000550718 FKBPLQ9UIM3 349 aa11.9□□□□□ -0.5
GNPTAB-208ENST00000550718 SNRPBP14678 240 aaKnown RBP11.89□□□□□ -0.51
GNPTAB-208ENST00000550718 TRIM46Q7Z4K8 759 aa11.89□□□□□ -0.51
GNPTAB-208ENST00000550718 TIMP2P16035 220 aa11.88□□□□□ -0.51
GNPTAB-208ENST00000550718 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
GNPTAB-208ENST00000550718 ARID5BQ14865 1188 aa11.87□□□□□ -0.51
GNPTAB-208ENST00000550718 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
GNPTAB-208ENST00000550718 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
GNPTAB-208ENST00000550718 GPSM3Q9Y4H4 160 aa11.87□□□□□ -0.51
GNPTAB-208ENST00000550718 WDR4P57081 412 aaKnown RBP11.86□□□□□ -0.51
GNPTAB-208ENST00000550718 AP1G2O75843 785 aa11.85□□□□□ -0.51
GNPTAB-208ENST00000550718 BMP1P13497 986 aa11.85□□□□□ -0.51
GNPTAB-208ENST00000550718 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
GNPTAB-208ENST00000550718 RFC5P40937 340 aa11.84□□□□□ -0.51
GNPTAB-208ENST00000550718 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
GNPTAB-208ENST00000550718 PNMA1Q8ND90 353 aa11.84□□□□□ -0.51
GNPTAB-208ENST00000550718 CDV3Q9UKY7 258 aaKnown RBP11.84□□□□□ -0.51
GNPTAB-208ENST00000550718 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
GNPTAB-208ENST00000550718 NR3C2P08235 984 aa11.83□□□□□ -0.52
GNPTAB-208ENST00000550718 NR6A1Q15406 480 aa11.83□□□□□ -0.52
GNPTAB-208ENST00000550718 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
GNPTAB-208ENST00000550718 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
GNPTAB-208ENST00000550718 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
GNPTAB-208ENST00000550718 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
GNPTAB-208ENST00000550718 MRPL14Q6P1L8 145 aaKnown RBP11.82□□□□□ -0.52
GNPTAB-208ENST00000550718 VASH1Q7L8A9 365 aaPredicted RBP11.82□□□□□ -0.52
GNPTAB-208ENST00000550718 ARHGAP9Q9BRR9 750 aa11.82□□□□□ -0.52
GNPTAB-208ENST00000550718 WFS1O76024 890 aa11.81□□□□□ -0.52
GNPTAB-208ENST00000550718 ZIC2O95409 532 aaPredicted RBP11.81□□□□□ -0.52
GNPTAB-208ENST00000550718 SCARF1Q14162 830 aa11.81□□□□□ -0.52
GNPTAB-208ENST00000550718 PTK2Q05397 1052 aa11.8□□□□□ -0.52
GNPTAB-208ENST00000550718 ITPKCQ96DU7 683 aa11.8□□□□□ -0.52
GNPTAB-208ENST00000550718 ZFP42Q96MM3 310 aa11.8□□□□□ -0.52
GNPTAB-208ENST00000550718 TERTO14746 1132 aaKnown RBP11.79□□□□□ -0.52
GNPTAB-208ENST00000550718 FSHRP23945 695 aa11.79□□□□□ -0.52
GNPTAB-208ENST00000550718 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
GNPTAB-208ENST00000550718 CARD14Q9BXL6 1004 aa11.79□□□□□ -0.52
GNPTAB-208ENST00000550718 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
GNPTAB-208ENST00000550718 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
GNPTAB-208ENST00000550718 ZBTB33Q86T24 672 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms