RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
ATP2B1-207ENST00000550716 XRN1Q8IZH2 1706 aaKnown RBP13.32□□□□□ -0.28
ATP2B1-207ENST00000550716 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
ATP2B1-207ENST00000550716 METP08581 1390 aa13.32□□□□□ -0.28
ATP2B1-207ENST00000550716 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
ATP2B1-207ENST00000550716 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
ATP2B1-207ENST00000550716 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
ATP2B1-207ENST00000550716 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
ATP2B1-207ENST00000550716 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
ATP2B1-207ENST00000550716 ATF3P18847 181 aa13.29□□□□□ -0.28
ATP2B1-207ENST00000550716 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
ATP2B1-207ENST00000550716 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
ATP2B1-207ENST00000550716 MST1RQ04912 1400 aa13.29□□□□□ -0.28
ATP2B1-207ENST00000550716 MICALL2Q8IY33 904 aa13.28□□□□□ -0.28
ATP2B1-207ENST00000550716 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
ATP2B1-207ENST00000550716 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
ATP2B1-207ENST00000550716 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
ATP2B1-207ENST00000550716 ZNF326Q5BKZ1 582 aaKnown RBP13.27□□□□□ -0.29
ATP2B1-207ENST00000550716 NAIPQ13075 1403 aa13.27□□□□□ -0.29
ATP2B1-207ENST00000550716 RRBP1Q9P2E9 1410 aaKnown RBP13.27□□□□□ -0.29
ATP2B1-207ENST00000550716 DCCP43146 1447 aa13.26□□□□□ -0.29
ATP2B1-207ENST00000550716 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
ATP2B1-207ENST00000550716 SPATA31A6Q5VVP1 1343 aa13.26□□□□□ -0.29
ATP2B1-207ENST00000550716 DDX17Q92841 729 aaKnown RBP13.25□□□□□ -0.29
ATP2B1-207ENST00000550716 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
ATP2B1-207ENST00000550716 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
ATP2B1-207ENST00000550716 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
ATP2B1-207ENST00000550716 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
ATP2B1-207ENST00000550716 MEX3CQ5U5Q3 659 aaKnown RBP13.23□□□□□ -0.29
ATP2B1-207ENST00000550716 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
ATP2B1-207ENST00000550716 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
ATP2B1-207ENST00000550716 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
ATP2B1-207ENST00000550716 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
ATP2B1-207ENST00000550716 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
ATP2B1-207ENST00000550716 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
ATP2B1-207ENST00000550716 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
ATP2B1-207ENST00000550716 PPP1R37O75864 691 aa13.19□□□□□ -0.3
ATP2B1-207ENST00000550716 ZNF772Q68DY9 489 aaPredicted RBP13.19□□□□□ -0.3
ATP2B1-207ENST00000550716 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
ATP2B1-207ENST00000550716 AFF2P51816 1311 aa13.18□□□□□ -0.3
ATP2B1-207ENST00000550716 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
ATP2B1-207ENST00000550716 RYDENQ9NUL5 291 aaKnown RBP13.18□□□□□ -0.3
ATP2B1-207ENST00000550716 PTCH1Q13635 1447 aa13.18□□□□□ -0.3
ATP2B1-207ENST00000550716 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATP2B1-207ENST00000550716 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
ATP2B1-207ENST00000550716 ORAI2Q96SN7 254 aa13.15□□□□□ -0.3
ATP2B1-207ENST00000550716 KIF1BO60333 1816 aa13.15□□□□□ -0.3
ATP2B1-207ENST00000550716 RGS12O14924 1447 aa13.14□□□□□ -0.31
ATP2B1-207ENST00000550716 RXRBP28702 533 aa13.14□□□□□ -0.31
ATP2B1-207ENST00000550716 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
ATP2B1-207ENST00000550716 C8orf37Q96NL8 207 aa13.14□□□□□ -0.31
ATP2B1-207ENST00000550716 LAMC1P11047 1609 aa13.13□□□□□ -0.31
ATP2B1-207ENST00000550716 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 PPLO60437 1756 aa13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
ATP2B1-207ENST00000550716 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
ATP2B1-207ENST00000550716 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
ATP2B1-207ENST00000550716 SPATA31E1Q6ZUB1 1445 aa13.09□□□□□ -0.31
ATP2B1-207ENST00000550716 PLEKHH1Q9ULM0 1364 aa13.08□□□□□ -0.31
ATP2B1-207ENST00000550716 CDC42BPGQ6DT37 1551 aa13.08□□□□□ -0.32
ATP2B1-207ENST00000550716 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
ATP2B1-207ENST00000550716 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
ATP2B1-207ENST00000550716 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
ATP2B1-207ENST00000550716 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
ATP2B1-207ENST00000550716 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
ATP2B1-207ENST00000550716 PXDNQ92626 1479 aa13.07□□□□□ -0.32
ATP2B1-207ENST00000550716 CCDC144AA2RUR9 1427 aa13.06□□□□□ -0.32
ATP2B1-207ENST00000550716 MYOM2P54296 1465 aa13.06□□□□□ -0.32
ATP2B1-207ENST00000550716 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
ATP2B1-207ENST00000550716 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
ATP2B1-207ENST00000550716 STK26Q9P289 416 aa13.06□□□□□ -0.32
ATP2B1-207ENST00000550716 TECPR2O15040 1411 aa13.05□□□□□ -0.32
ATP2B1-207ENST00000550716 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
ATP2B1-207ENST00000550716 TMEM132EQ6IEE7 984 aa13.05□□□□□ -0.32
ATP2B1-207ENST00000550716 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
ATP2B1-207ENST00000550716 COL22A1Q8NFW1 1626 aaPredicted RBP13.05□□□□□ -0.32
ATP2B1-207ENST00000550716 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
ATP2B1-207ENST00000550716 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
ATP2B1-207ENST00000550716 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
ATP2B1-207ENST00000550716 MPHOSPH9Q99550 1183 aa13.04□□□□□ -0.32
ATP2B1-207ENST00000550716 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
ATP2B1-207ENST00000550716 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
ATP2B1-207ENST00000550716 SNPHO15079 494 aa13.03□□□□□ -0.32
ATP2B1-207ENST00000550716 USP21Q9UK80 565 aa13.03□□□□□ -0.32
ATP2B1-207ENST00000550716 ATRNO75882 1429 aa13.03□□□□□ -0.32
ATP2B1-207ENST00000550716 FOXO3O43524 673 aa13.02□□□□□ -0.33
ATP2B1-207ENST00000550716 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
ATP2B1-207ENST00000550716 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
ATP2B1-207ENST00000550716 EP400Q96L91 3159 aa13.02□□□□□ -0.33
ATP2B1-207ENST00000550716 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
ATP2B1-207ENST00000550716 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
ATP2B1-207ENST00000550716 YTHDC2Q9H6S0 1430 aaKnown RBP13.01□□□□□ -0.33
ATP2B1-207ENST00000550716 BCL9LQ86UU0 1499 aa13.01□□□□□ -0.33
ATP2B1-207ENST00000550716 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
ATP2B1-207ENST00000550716 C2orf72A6NCS6 295 aa13□□□□□ -0.33
ATP2B1-207ENST00000550716 TMC2Q8TDI7 906 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms