RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 USP21Q9UK80 565 aa15.95■□□□□ 0.14
BRF1-218ENST00000550692 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
BRF1-218ENST00000550692 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
BRF1-218ENST00000550692 NUTM2GQ5VZR2 741 aa15.92■□□□□ 0.14
BRF1-218ENST00000550692 BCL9LQ86UU0 1499 aa15.91■□□□□ 0.14
BRF1-218ENST00000550692 ABCA3Q99758 1704 aa15.91■□□□□ 0.14
BRF1-218ENST00000550692 RBM6P78332 1123 aaKnown RBP15.91■□□□□ 0.14
BRF1-218ENST00000550692 TRPC5Q9UL62 973 aaPredicted RBP15.91■□□□□ 0.14
BRF1-218ENST00000550692 ST20-MTHFSA0A0A6YYL1 179 aa15.9■□□□□ 0.14
BRF1-218ENST00000550692 SLIT2O94813 1529 aa15.89■□□□□ 0.13
BRF1-218ENST00000550692 ATRNO75882 1429 aa15.89■□□□□ 0.13
BRF1-218ENST00000550692 FAM83GA6ND36 823 aa15.89■□□□□ 0.13
BRF1-218ENST00000550692 UPF1Q92900 1129 aaKnown RBP eCLIP15.89■□□□□ 0.13
BRF1-218ENST00000550692 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
BRF1-218ENST00000550692 ABTB2Q8N961 1025 aa15.88■□□□□ 0.13
BRF1-218ENST00000550692 TESK2Q96S53 571 aa15.88■□□□□ 0.13
BRF1-218ENST00000550692 USP6P35125 1406 aa15.87■□□□□ 0.13
BRF1-218ENST00000550692 UNC5CLQ8IV45 518 aa15.87■□□□□ 0.13
BRF1-218ENST00000550692 CRYBG1Q9Y4K1 1723 aa15.87■□□□□ 0.13
BRF1-218ENST00000550692 CDK12Q9NYV4 1490 aaPredicted RBP15.86■□□□□ 0.13
BRF1-218ENST00000550692 USP47Q96K76 1375 aa15.85■□□□□ 0.13
BRF1-218ENST00000550692 RGS12O14924 1447 aa15.85■□□□□ 0.13
BRF1-218ENST00000550692 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
BRF1-218ENST00000550692 PLCH1Q4KWH8 1693 aa15.84■□□□□ 0.13
BRF1-218ENST00000550692 GJD4Q96KN9 370 aaPredicted RBP15.84■□□□□ 0.13
BRF1-218ENST00000550692 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
BRF1-218ENST00000550692 BRD4O60885 1362 aaPredicted RBP15.84■□□□□ 0.13
BRF1-218ENST00000550692 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.83■□□□□ 0.13
BRF1-218ENST00000550692 ZC3H6P61129 1189 aaKnown RBP15.83■□□□□ 0.12
BRF1-218ENST00000550692 NLRP13Q86W25 1043 aa15.83■□□□□ 0.12
BRF1-218ENST00000550692 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
BRF1-218ENST00000550692 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
BRF1-218ENST00000550692 PRDM11Q9NQV5 511 aa15.83■□□□□ 0.12
BRF1-218ENST00000550692 BTG4Q9NY30 223 aa15.83■□□□□ 0.12
BRF1-218ENST00000550692 CPSF1Q10570 1443 aaKnown RBP15.83■□□□□ 0.12
BRF1-218ENST00000550692 PHRF1Q9P1Y6 1649 aaKnown RBP15.83■□□□□ 0.12
BRF1-218ENST00000550692 AKAP12Q02952 1782 aa15.82■□□□□ 0.12
BRF1-218ENST00000550692 CHRNA2Q15822 529 aa15.82■□□□□ 0.12
BRF1-218ENST00000550692 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
BRF1-218ENST00000550692 USP19O94966 1318 aa15.82■□□□□ 0.12
BRF1-218ENST00000550692 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
BRF1-218ENST00000550692 KIAA0232Q92628 1395 aa15.82■□□□□ 0.12
BRF1-218ENST00000550692 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
BRF1-218ENST00000550692 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
BRF1-218ENST00000550692 NLRP6P59044 892 aa15.81■□□□□ 0.12
BRF1-218ENST00000550692 COL14A1Q05707 1796 aaKnown RBP15.81■□□□□ 0.12
BRF1-218ENST00000550692 VPS72Q15906 364 aa15.81■□□□□ 0.12
BRF1-218ENST00000550692 CD163L1Q9NR16 1453 aa15.8■□□□□ 0.12
BRF1-218ENST00000550692 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
BRF1-218ENST00000550692 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
BRF1-218ENST00000550692 GCP02774 474 aa15.8■□□□□ 0.12
BRF1-218ENST00000550692 GLI3P10071 1580 aa15.79■□□□□ 0.12
BRF1-218ENST00000550692 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
BRF1-218ENST00000550692 NRKQ7Z2Y5 1582 aa15.79■□□□□ 0.12
BRF1-218ENST00000550692 NRAPQ86VF7 1730 aa15.78■□□□□ 0.12
BRF1-218ENST00000550692 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
BRF1-218ENST00000550692 TTC21AQ8NDW8 1320 aa15.77■□□□□ 0.12
BRF1-218ENST00000550692 TMF1P82094 1093 aa15.77■□□□□ 0.12
BRF1-218ENST00000550692 HDGFL2Q7Z4V5 671 aaPredicted RBP15.77■□□□□ 0.12
BRF1-218ENST00000550692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.12
BRF1-218ENST00000550692 MON2Q7Z3U7 1717 aa15.77■□□□□ 0.11
BRF1-218ENST00000550692 CPDO75976 1380 aa15.76■□□□□ 0.11
BRF1-218ENST00000550692 TERF2IPQ9NYB0 399 aa15.76■□□□□ 0.11
BRF1-218ENST00000550692 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
BRF1-218ENST00000550692 ZRANB1Q9UGI0 708 aa15.75■□□□□ 0.11
BRF1-218ENST00000550692 SLIT3O75094 1523 aa15.74■□□□□ 0.11
BRF1-218ENST00000550692 ZBTB7CA1YPR0 619 aa15.74■□□□□ 0.11
BRF1-218ENST00000550692 ONECUT3O60422 494 aaPredicted RBP15.74■□□□□ 0.11
BRF1-218ENST00000550692 NME9Q86XW9 330 aa15.74■□□□□ 0.11
BRF1-218ENST00000550692 STRN4Q9NRL3 753 aa15.74■□□□□ 0.11
BRF1-218ENST00000550692 CAMTA1Q9Y6Y1 1673 aa15.73■□□□□ 0.11
BRF1-218ENST00000550692 SOX12O15370 315 aa15.73■□□□□ 0.11
BRF1-218ENST00000550692 SEPT12Q8IYM1 358 aa15.73■□□□□ 0.11
BRF1-218ENST00000550692 NINLQ9Y2I6 1382 aa15.73■□□□□ 0.11
BRF1-218ENST00000550692 SPATA31A5Q5VU36 1347 aa15.72■□□□□ 0.11
BRF1-218ENST00000550692 SPATA31A7Q8IWB4 1347 aa15.72■□□□□ 0.11
BRF1-218ENST00000550692 EDC4Q6P2E9 1401 aaKnown RBP15.72■□□□□ 0.11
BRF1-218ENST00000550692 FAM98CQ17RN3 349 aaKnown RBP15.72■□□□□ 0.11
BRF1-218ENST00000550692 SRCAPQ6ZRS2 3230 aa15.72■□□□□ 0.11
BRF1-218ENST00000550692 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
BRF1-218ENST00000550692 EVA1CP58658 441 aa15.71■□□□□ 0.11
BRF1-218ENST00000550692 CDCA8Q53HL2 280 aa15.71■□□□□ 0.11
BRF1-218ENST00000550692 KCNH5Q8NCM2 988 aa15.71■□□□□ 0.11
BRF1-218ENST00000550692 USP31Q70CQ4 1352 aa15.71■□□□□ 0.11
BRF1-218ENST00000550692 EIF4G2P78344 907 aaKnown RBP eCLIP15.7■□□□□ 0.1
BRF1-218ENST00000550692 LARP1Q6PKG0 1096 aaKnown RBP15.7■□□□□ 0.1
BRF1-218ENST00000550692 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
BRF1-218ENST00000550692 BRWD3Q6RI45 1802 aa15.7■□□□□ 0.1
BRF1-218ENST00000550692 SPATA31A1Q5TZJ5 1347 aa15.69■□□□□ 0.1
BRF1-218ENST00000550692 A0A0G2JS52 829 aa15.69■□□□□ 0.1
BRF1-218ENST00000550692 HSPA5P11021 654 aaKnown RBP15.69■□□□□ 0.1
BRF1-218ENST00000550692 MYT1Q01538 1121 aa15.69■□□□□ 0.1
BRF1-218ENST00000550692 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
BRF1-218ENST00000550692 AATKQ6ZMQ8 1374 aa15.69■□□□□ 0.1
BRF1-218ENST00000550692 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
BRF1-218ENST00000550692 AXIN2Q9Y2T1 843 aa15.68■□□□□ 0.1
BRF1-218ENST00000550692 NFAT5O94916 1531 aa15.68■□□□□ 0.1
BRF1-218ENST00000550692 COL5A2P05997 1499 aaPredicted RBP15.67■□□□□ 0.1
BRF1-218ENST00000550692 COL18A1P39060 1754 aa15.67■□□□□ 0.1
BRF1-218ENST00000550692 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms