RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
NPAS3-208ENST00000550662 PDIA4P13667 645 aaKnown RBP11.82□□□□□ -0.52
NPAS3-208ENST00000550662 JUNDP17535 347 aa11.8□□□□□ -0.52
NPAS3-208ENST00000550662 VAC14Q08AM6 782 aa11.8□□□□□ -0.52
NPAS3-208ENST00000550662 PTPRNQ16849 979 aa11.8□□□□□ -0.52
NPAS3-208ENST00000550662 Q6ZNB5 142 aa11.8□□□□□ -0.52
NPAS3-208ENST00000550662 ZPR1O75312 459 aa11.79□□□□□ -0.52
NPAS3-208ENST00000550662 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
NPAS3-208ENST00000550662 ALG2Q9H553 416 aa11.78□□□□□ -0.52
NPAS3-208ENST00000550662 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
NPAS3-208ENST00000550662 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
NPAS3-208ENST00000550662 GFRA3O60609 400 aa11.77□□□□□ -0.53
NPAS3-208ENST00000550662 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
NPAS3-208ENST00000550662 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
NPAS3-208ENST00000550662 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
NPAS3-208ENST00000550662 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
NPAS3-208ENST00000550662 SPSB2Q99619 263 aa11.75□□□□□ -0.53
NPAS3-208ENST00000550662 FKBPLQ9UIM3 349 aa11.75□□□□□ -0.53
NPAS3-208ENST00000550662 ACIN1Q9UKV3 1341 aaKnown RBP11.75□□□□□ -0.53
NPAS3-208ENST00000550662 LCE2BO14633 110 aa11.74□□□□□ -0.53
NPAS3-208ENST00000550662 NR1H3Q13133 447 aa11.74□□□□□ -0.53
NPAS3-208ENST00000550662 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
NPAS3-208ENST00000550662 DXOO77932 396 aaKnown RBP11.73□□□□□ -0.53
NPAS3-208ENST00000550662 CCNYL3P0C7X3 344 aa11.72□□□□□ -0.53
NPAS3-208ENST00000550662 GGCXP38435 758 aa11.72□□□□□ -0.53
NPAS3-208ENST00000550662 PDE4CQ08493 712 aa11.72□□□□□ -0.53
NPAS3-208ENST00000550662 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
NPAS3-208ENST00000550662 ZBBXA8MT70 800 aa11.71□□□□□ -0.53
NPAS3-208ENST00000550662 MMP16P51512 607 aa11.71□□□□□ -0.53
NPAS3-208ENST00000550662 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
NPAS3-208ENST00000550662 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.53
NPAS3-208ENST00000550662 PPP1R12CQ9BZL4 782 aa11.71□□□□□ -0.53
NPAS3-208ENST00000550662 CTHP32929 405 aa11.7□□□□□ -0.54
NPAS3-208ENST00000550662 FAM160A2Q8N612 972 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-208ENST00000550662 GPKOWQ92917 476 aaPredicted RBP eCLIP11.7□□□□□ -0.54
NPAS3-208ENST00000550662 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
NPAS3-208ENST00000550662 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
NPAS3-208ENST00000550662 ZNF592Q92610 1267 aa11.69□□□□□ -0.54
NPAS3-208ENST00000550662 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
NPAS3-208ENST00000550662 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
NPAS3-208ENST00000550662 ADH1BP00325 375 aa11.68□□□□□ -0.54
NPAS3-208ENST00000550662 FBXO45P0C2W1 286 aa11.68□□□□□ -0.54
NPAS3-208ENST00000550662 KCNH2Q12809 1159 aa11.68□□□□□ -0.54
NPAS3-208ENST00000550662 GPSM3Q9Y4H4 160 aa11.68□□□□□ -0.54
NPAS3-208ENST00000550662 PALM3A6NDB9 673 aaPredicted RBP11.67□□□□□ -0.54
NPAS3-208ENST00000550662 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
NPAS3-208ENST00000550662 TLL1O43897 1013 aa11.67□□□□□ -0.54
NPAS3-208ENST00000550662 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
NPAS3-208ENST00000550662 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
NPAS3-208ENST00000550662 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
NPAS3-208ENST00000550662 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
NPAS3-208ENST00000550662 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
NPAS3-208ENST00000550662 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-208ENST00000550662 PDXDC2PQ6P474 469 aa11.65□□□□□ -0.54
NPAS3-208ENST00000550662 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
NPAS3-208ENST00000550662 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
NPAS3-208ENST00000550662 MCCD1P59942 119 aaPredicted RBP11.64□□□□□ -0.55
NPAS3-208ENST00000550662 PTK2Q05397 1052 aa11.64□□□□□ -0.55
NPAS3-208ENST00000550662 UCN2Q96RP3 112 aa11.64□□□□□ -0.55
NPAS3-208ENST00000550662 RFX1P22670 979 aa11.63□□□□□ -0.55
NPAS3-208ENST00000550662 KCTD17Q8N5Z5 321 aa11.63□□□□□ -0.55
NPAS3-208ENST00000550662 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
NPAS3-208ENST00000550662 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
NPAS3-208ENST00000550662 SRPK2P78362 688 aaKnown RBP11.62□□□□□ -0.55
NPAS3-208ENST00000550662 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
NPAS3-208ENST00000550662 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
NPAS3-208ENST00000550662 PPEF1O14829 653 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-208ENST00000550662 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
NPAS3-208ENST00000550662 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.6□□□□□ -0.55
NPAS3-208ENST00000550662 ATP9BO43861 1147 aa11.6□□□□□ -0.55
NPAS3-208ENST00000550662 S1PR4O95977 384 aa11.6□□□□□ -0.55
NPAS3-208ENST00000550662 SLC19A1P41440 591 aa11.6□□□□□ -0.55
NPAS3-208ENST00000550662 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
NPAS3-208ENST00000550662 MAFBQ9Y5Q3 323 aaPredicted RBP11.6□□□□□ -0.55
NPAS3-208ENST00000550662 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
NPAS3-208ENST00000550662 ANKLE1Q8NAG6 615 aa11.59□□□□□ -0.55
NPAS3-208ENST00000550662 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
NPAS3-208ENST00000550662 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
NPAS3-208ENST00000550662 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
NPAS3-208ENST00000550662 SPRYD7Q5W111 196 aa11.57□□□□□ -0.56
NPAS3-208ENST00000550662 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
NPAS3-208ENST00000550662 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
NPAS3-208ENST00000550662 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
NPAS3-208ENST00000550662 ATG7O95352 703 aa11.55□□□□□ -0.56
NPAS3-208ENST00000550662 ARHGAP9Q9BRR9 750 aa11.55□□□□□ -0.56
NPAS3-208ENST00000550662 ZNF598Q86UK7 904 aaKnown RBP11.53□□□□□ -0.56
NPAS3-208ENST00000550662 VRTNQ9H8Y1 702 aa11.53□□□□□ -0.56
NPAS3-208ENST00000550662 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
NPAS3-208ENST00000550662 PCDHB9Q9Y5E1 797 aa11.53□□□□□ -0.56
NPAS3-208ENST00000550662 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
NPAS3-208ENST00000550662 SH3BP5LQ7L8J4 393 aa11.52□□□□□ -0.57
NPAS3-208ENST00000550662 ZBTB33Q86T24 672 aa11.52□□□□□ -0.57
NPAS3-208ENST00000550662 PLEKHM2Q8IWE5 1019 aa11.52□□□□□ -0.57
NPAS3-208ENST00000550662 ADAM32Q8TC27 787 aa11.52□□□□□ -0.57
NPAS3-208ENST00000550662 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.57
NPAS3-208ENST00000550662 PATL2C9JE40 543 aaKnown RBP11.51□□□□□ -0.57
NPAS3-208ENST00000550662 LZTS3O60299 673 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-208ENST00000550662 SKIP12755 728 aa11.51□□□□□ -0.57
NPAS3-208ENST00000550662 PLA2G2CQ5R387 149 aa11.51□□□□□ -0.57
NPAS3-208ENST00000550662 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms