RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 COL14A1Q05707 1796 aaKnown RBP20.64■□□□□ 0.9
TPCN1-213ENST00000550543 TRPM3Q9HCF6 1732 aaPredicted RBP20.64■□□□□ 0.9
TPCN1-213ENST00000550543 ATP7BP35670 1465 aa20.64■□□□□ 0.89
TPCN1-213ENST00000550543 ALS2Q96Q42 1657 aa20.63■□□□□ 0.89
TPCN1-213ENST00000550543 EP400Q96L91 3159 aa20.62■□□□□ 0.89
TPCN1-213ENST00000550543 ITSN1Q15811 1721 aa20.62■□□□□ 0.89
TPCN1-213ENST00000550543 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
TPCN1-213ENST00000550543 CCDC61Q9Y6R9 512 aa20.62■□□□□ 0.89
TPCN1-213ENST00000550543 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
TPCN1-213ENST00000550543 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
TPCN1-213ENST00000550543 CDK19Q9BWU1 502 aa20.59■□□□□ 0.89
TPCN1-213ENST00000550543 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
TPCN1-213ENST00000550543 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.88
TPCN1-213ENST00000550543 PLEKHG3A1L390 1219 aa20.57■□□□□ 0.88
TPCN1-213ENST00000550543 DEFB132Q7Z7B7 95 aa20.57■□□□□ 0.88
TPCN1-213ENST00000550543 NRAPQ86VF7 1730 aa20.57■□□□□ 0.88
TPCN1-213ENST00000550543 ARHGEF28Q8N1W1 1705 aaKnown RBP20.57■□□□□ 0.88
TPCN1-213ENST00000550543 KIAA1210Q9ULL0 1709 aa20.57■□□□□ 0.88
TPCN1-213ENST00000550543 BRWD3Q6RI45 1802 aa20.57■□□□□ 0.88
TPCN1-213ENST00000550543 NBPF8Q3BBV2 869 aa20.55■□□□□ 0.88
TPCN1-213ENST00000550543 KIAA0232Q92628 1395 aa20.55■□□□□ 0.88
TPCN1-213ENST00000550543 ACEP12821 1306 aa20.54■□□□□ 0.88
TPCN1-213ENST00000550543 EVA1CP58658 441 aa20.53■□□□□ 0.88
TPCN1-213ENST00000550543 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
TPCN1-213ENST00000550543 C11orf95C9JLR9 678 aaPredicted RBP20.52■□□□□ 0.88
TPCN1-213ENST00000550543 FAM196AQ6ZSG2 479 aa20.52■□□□□ 0.88
TPCN1-213ENST00000550543 ABTB2Q8N961 1025 aa20.52■□□□□ 0.88
TPCN1-213ENST00000550543 CENPJQ9HC77 1338 aaPredicted RBP20.52■□□□□ 0.87
TPCN1-213ENST00000550543 SRPK2P78362 688 aaKnown RBP20.51■□□□□ 0.87
TPCN1-213ENST00000550543 NLRP13Q86W25 1043 aa20.51■□□□□ 0.87
TPCN1-213ENST00000550543 DISP2A7MBM2 1401 aa20.51■□□□□ 0.87
TPCN1-213ENST00000550543 CPDO75976 1380 aa20.5■□□□□ 0.87
TPCN1-213ENST00000550543 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
TPCN1-213ENST00000550543 BARGINQ6ZT62 677 aa20.49■□□□□ 0.87
TPCN1-213ENST00000550543 STRN4Q9NRL3 753 aa20.49■□□□□ 0.87
TPCN1-213ENST00000550543 CRYBG1Q9Y4K1 1723 aa20.49■□□□□ 0.87
TPCN1-213ENST00000550543 PARD3Q8TEW0 1356 aa20.48■□□□□ 0.87
TPCN1-213ENST00000550543 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
TPCN1-213ENST00000550543 THRAP3Q9Y2W1 955 aaKnown RBP20.48■□□□□ 0.87
TPCN1-213ENST00000550543 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
TPCN1-213ENST00000550543 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
TPCN1-213ENST00000550543 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
TPCN1-213ENST00000550543 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
TPCN1-213ENST00000550543 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
TPCN1-213ENST00000550543 USP19O94966 1318 aa20.47■□□□□ 0.87
TPCN1-213ENST00000550543 PPIP5K1Q6PFW1 1433 aa20.45■□□□□ 0.86
TPCN1-213ENST00000550543 SSH2Q76I76 1423 aa20.45■□□□□ 0.86
TPCN1-213ENST00000550543 NUTM2GQ5VZR2 741 aa20.45■□□□□ 0.86
TPCN1-213ENST00000550543 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
TPCN1-213ENST00000550543 PHRF1Q9P1Y6 1649 aaKnown RBP20.45■□□□□ 0.86
TPCN1-213ENST00000550543 EN1Q05925 392 aaPredicted RBP20.44■□□□□ 0.86
TPCN1-213ENST00000550543 NBPF1Q3BBV0 1214 aa20.44■□□□□ 0.86
TPCN1-213ENST00000550543 LRP5O75197 1615 aa20.44■□□□□ 0.86
TPCN1-213ENST00000550543 GCP02774 474 aa20.43■□□□□ 0.86
TPCN1-213ENST00000550543 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
TPCN1-213ENST00000550543 USP35Q9P2H5 1018 aa20.41■□□□□ 0.86
TPCN1-213ENST00000550543 NRKQ7Z2Y5 1582 aa20.4■□□□□ 0.86
TPCN1-213ENST00000550543 CABP2Q9NPB3 220 aa20.4■□□□□ 0.86
TPCN1-213ENST00000550543 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
TPCN1-213ENST00000550543 PSDA5PKW4 1024 aaPredicted RBP20.38■□□□□ 0.85
TPCN1-213ENST00000550543 TRIM37O94972 964 aa20.38■□□□□ 0.85
TPCN1-213ENST00000550543 NLRP6P59044 892 aa20.38■□□□□ 0.85
TPCN1-213ENST00000550543 FAM182BQ5T319 152 aa20.38■□□□□ 0.85
TPCN1-213ENST00000550543 LARP1Q6PKG0 1096 aaKnown RBP20.38■□□□□ 0.85
TPCN1-213ENST00000550543 USP6P35125 1406 aa20.37■□□□□ 0.85
TPCN1-213ENST00000550543 APBA3O96018 575 aa20.37■□□□□ 0.85
TPCN1-213ENST00000550543 NBPF14Q5TI25 921 aa20.37■□□□□ 0.85
TPCN1-213ENST00000550543 CABP1Q9NZU7 370 aa20.37■□□□□ 0.85
TPCN1-213ENST00000550543 AATKQ6ZMQ8 1374 aa20.36■□□□□ 0.85
TPCN1-213ENST00000550543 CAMTA1Q9Y6Y1 1673 aa20.36■□□□□ 0.85
TPCN1-213ENST00000550543 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
TPCN1-213ENST00000550543 CAMKK2Q96RR4 588 aa20.36■□□□□ 0.85
TPCN1-213ENST00000550543 CRB1P82279 1406 aa20.36■□□□□ 0.85
TPCN1-213ENST00000550543 R3HDM1Q15032 1099 aaKnown RBP20.35■□□□□ 0.85
TPCN1-213ENST00000550543 KCNH5Q8NCM2 988 aa20.35■□□□□ 0.85
TPCN1-213ENST00000550543 CDCA7Q9BWT1 371 aaPredicted RBP20.35■□□□□ 0.85
TPCN1-213ENST00000550543 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
TPCN1-213ENST00000550543 EZH2Q15910 746 aaKnown RBP20.34■□□□□ 0.85
TPCN1-213ENST00000550543 COL5A2P05997 1499 aaPredicted RBP20.34■□□□□ 0.85
TPCN1-213ENST00000550543 LMO7Q8WWI1 1683 aa20.34■□□□□ 0.85
TPCN1-213ENST00000550543 QRICH2Q9H0J4 1663 aa20.33■□□□□ 0.85
TPCN1-213ENST00000550543 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.84
TPCN1-213ENST00000550543 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
TPCN1-213ENST00000550543 OVOS2A0A0G2JMS6 1433 aa20.3■□□□□ 0.84
TPCN1-213ENST00000550543 OVOS2A0A0J9YW53 1432 aa20.3■□□□□ 0.84
TPCN1-213ENST00000550543 OVOS2Q6IE36 1432 aa20.3■□□□□ 0.84
TPCN1-213ENST00000550543 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
TPCN1-213ENST00000550543 SLIT3O75094 1523 aa20.3■□□□□ 0.84
TPCN1-213ENST00000550543 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
TPCN1-213ENST00000550543 TRPM1Q7Z4N2 1603 aa20.28■□□□□ 0.84
TPCN1-213ENST00000550543 DDB1Q16531 1140 aa20.28■□□□□ 0.84
TPCN1-213ENST00000550543 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.84
TPCN1-213ENST00000550543 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.83
TPCN1-213ENST00000550543 PARP4Q9UKK3 1724 aaKnown RBP20.26■□□□□ 0.83
TPCN1-213ENST00000550543 SBNO2Q9Y2G9 1366 aa20.25■□□□□ 0.83
TPCN1-213ENST00000550543 CPSF1Q10570 1443 aaKnown RBP20.25■□□□□ 0.83
TPCN1-213ENST00000550543 CSB-PGBD3P0DP91 1061 aa20.24■□□□□ 0.83
TPCN1-213ENST00000550543 NEUROD1Q13562 356 aa20.24■□□□□ 0.83
TPCN1-213ENST00000550543 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
TPCN1-213ENST00000550543 ABCC6O95255 1503 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms