RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 CDK5RAP3Q96JB5 506 aa14.97□□□□□ -0.01
RAB3IP-212ENST00000550536 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
RAB3IP-212ENST00000550536 ERC1Q8IUD2 1116 aa14.97□□□□□ -0.01
RAB3IP-212ENST00000550536 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
RAB3IP-212ENST00000550536 SETD1BQ9UPS6 1966 aaKnown RBP14.97□□□□□ -0.01
RAB3IP-212ENST00000550536 ZFYVE27Q5T4F4 411 aa14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 GAS2L2Q8NHY3 880 aa14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 CLASRPQ8N2M8 674 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 CCP110O43303 1012 aa14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
RAB3IP-212ENST00000550536 MCM2P49736 904 aa14.96□□□□□ -0.02
RAB3IP-212ENST00000550536 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 GNAI3P08754 354 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 DCTN1Q14203 1278 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 SMARCE1Q969G3 411 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 MAGEC2Q9UBF1 373 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 PTPN23Q9H3S7 1636 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 WWC2Q6AWC2 1192 aa14.95□□□□□ -0.02
RAB3IP-212ENST00000550536 ITSN2Q9NZM3 1697 aa14.94□□□□□ -0.02
RAB3IP-212ENST00000550536 GNL3LQ9NVN8 582 aaKnown RBP14.94□□□□□ -0.02
RAB3IP-212ENST00000550536 FAM135AQ9P2D6 1515 aa14.94□□□□□ -0.02
RAB3IP-212ENST00000550536 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAB3IP-212ENST00000550536 ZNF396Q96N95 335 aaPredicted RBP14.93□□□□□ -0.02
RAB3IP-212ENST00000550536 CTTNBP2Q8WZ74 1663 aa14.93□□□□□ -0.02
RAB3IP-212ENST00000550536 NLRP6P59044 892 aa14.93□□□□□ -0.02
RAB3IP-212ENST00000550536 TMEM132AQ24JP5 1023 aa14.93□□□□□ -0.02
RAB3IP-212ENST00000550536 ERCC4Q92889 916 aaPredicted RBP14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 CFTRP13569 1480 aa14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 SMC2O95347 1197 aa14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 MTERF4Q7Z6M4 381 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 CCAR1Q8IX12 1150 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 TRIM5Q9C035 493 aa14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 MBD3O95983 291 aa14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 GNAI2P04899 355 aa14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-212ENST00000550536 MTHFSP49914 203 aa14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 TTC39AQ5SRH9 613 aa14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 MTMR7Q9Y216 660 aa14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 FILIP1LQ4L180 1135 aa14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 SYCP1Q15431 976 aa14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
RAB3IP-212ENST00000550536 PIP4K2AP48426 406 aaPredicted RBP14.9□□□□□ -0.02
RAB3IP-212ENST00000550536 MAP7D2Q96T17 732 aa14.9□□□□□ -0.02
RAB3IP-212ENST00000550536 RABEP1Q15276 862 aa14.9□□□□□ -0.02
RAB3IP-212ENST00000550536 JMYQ8N9B5 988 aa14.9□□□□□ -0.02
RAB3IP-212ENST00000550536 TTLL5Q6EMB2 1281 aa14.9□□□□□ -0.02
RAB3IP-212ENST00000550536 ANKRD1Q15327 319 aa14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 TSPY26PQ9H489 355 aa14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 MRE11P49959 708 aa14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 SURF6O75683 361 aaKnown RBP14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 CCDC158Q5M9N0 1113 aa14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 CAVIN1Q6NZI2 390 aaKnown RBP14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 CNNM1Q9NRU3 951 aa14.89□□□□□ -0.03
RAB3IP-212ENST00000550536 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 EPRSP07814 1512 aaKnown RBP14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 ESCO1Q5FWF5 840 aa14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 KRT18P05783 430 aaKnown RBP14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 DHX8Q14562 1220 aaKnown RBP14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 STIM1Q13586 685 aa14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 TMEM132EQ6IEE7 984 aa14.88□□□□□ -0.03
RAB3IP-212ENST00000550536 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
RAB3IP-212ENST00000550536 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
RAB3IP-212ENST00000550536 ADAMTS8Q9UP79 889 aa14.87□□□□□ -0.03
RAB3IP-212ENST00000550536 GCC1Q96CN9 775 aa14.87□□□□□ -0.03
RAB3IP-212ENST00000550536 LUC7LQ9NQ29 371 aaKnown RBP14.87□□□□□ -0.03
RAB3IP-212ENST00000550536 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
RAB3IP-212ENST00000550536 NEK4P51957 841 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 ZNHIT6Q9NWK9 470 aaKnown RBP14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 NFKBIBQ15653 356 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 TXLNBQ8N3L3 684 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 IGF1RP08069 1367 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 CALRP27797 417 aaKnown RBP14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 ERLIN2O94905 339 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 TRIM22Q8IYM9 498 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 DNMBPQ6XZF7 1577 aa14.86□□□□□ -0.03
RAB3IP-212ENST00000550536 KDM4AO75164 1064 aa14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 PRKAR2BP31323 418 aa14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 NACAP1Q9BZK3 213 aa14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 TCP11L2Q8N4U5 519 aa14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 ZRSR2Q15696 482 aaKnown RBP14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 TWISTNBQ3B726 338 aaPredicted RBP14.85□□□□□ -0.03
RAB3IP-212ENST00000550536 GOLGA6L10A6NI86 522 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 LRRCC1Q9C099 1032 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 H0YHG0 523 aa14.84□□□□□ -0.03
RAB3IP-212ENST00000550536 ERBINQ96RT1 1412 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms