RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 KRT27Q7Z3Y8 459 aa31.61■■■□□ 2.65
SMARCC2-210ENST00000550519 PAK3O75914 559 aaPredicted RBP31.6■■■□□ 2.65
SMARCC2-210ENST00000550519 NRAPQ86VF7 1730 aa31.59■■■□□ 2.65
SMARCC2-210ENST00000550519 CDK19Q9BWU1 502 aa31.58■■■□□ 2.65
SMARCC2-210ENST00000550519 COL14A1Q05707 1796 aaKnown RBP31.58■■■□□ 2.65
SMARCC2-210ENST00000550519 DEFB132Q7Z7B7 95 aa31.57■■■□□ 2.64
SMARCC2-210ENST00000550519 FAM98CQ17RN3 349 aaKnown RBP31.56■■■□□ 2.64
SMARCC2-210ENST00000550519 SF3B2Q13435 895 aaKnown RBP31.55■■■□□ 2.64
SMARCC2-210ENST00000550519 CRYBG1Q9Y4K1 1723 aa31.54■■■□□ 2.64
SMARCC2-210ENST00000550519 ITSN1Q15811 1721 aa31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 SPATA31A5Q5VU36 1347 aa31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 SPATA31A7Q8IWB4 1347 aa31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 A0A0G2JS52 829 aa31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 MYT1Q01538 1121 aa31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 PRDM11Q9NQV5 511 aa31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 POLR3AO14802 1390 aaPredicted RBP31.52■■■□□ 2.64
SMARCC2-210ENST00000550519 NBPF1Q3BBV0 1214 aa31.51■■■□□ 2.63
SMARCC2-210ENST00000550519 CCDC61Q9Y6R9 512 aa31.51■■■□□ 2.63
SMARCC2-210ENST00000550519 KIAA1210Q9ULL0 1709 aa31.51■■■□□ 2.63
SMARCC2-210ENST00000550519 PLEKHG3A1L390 1219 aa31.49■■■□□ 2.63
SMARCC2-210ENST00000550519 ACEP12821 1306 aa31.49■■■□□ 2.63
SMARCC2-210ENST00000550519 NBPF8Q3BBV2 869 aa31.48■■■□□ 2.63
SMARCC2-210ENST00000550519 KIAA0232Q92628 1395 aa31.47■■■□□ 2.63
SMARCC2-210ENST00000550519 TOPAZ1Q8N9V7 1692 aa31.44■■■□□ 2.62
SMARCC2-210ENST00000550519 CHRNA2Q15822 529 aa31.43■■■□□ 2.62
SMARCC2-210ENST00000550519 NUTM2GQ5VZR2 741 aa31.43■■■□□ 2.62
SMARCC2-210ENST00000550519 ZC3H6P61129 1189 aaKnown RBP31.41■■■□□ 2.62
SMARCC2-210ENST00000550519 SPATA31A1Q5TZJ5 1347 aa31.41■■■□□ 2.62
SMARCC2-210ENST00000550519 PHRF1Q9P1Y6 1649 aaKnown RBP31.4■■■□□ 2.62
SMARCC2-210ENST00000550519 BAG6P46379 1132 aa31.4■■■□□ 2.62
SMARCC2-210ENST00000550519 THSD7AQ9UPZ6 1657 aa31.39■■■□□ 2.62
SMARCC2-210ENST00000550519 CENPJQ9HC77 1338 aaPredicted RBP31.39■■■□□ 2.62
SMARCC2-210ENST00000550519 FAM182BQ5T319 152 aa31.38■■■□□ 2.61
SMARCC2-210ENST00000550519 ABTB2Q8N961 1025 aa31.37■■■□□ 2.61
SMARCC2-210ENST00000550519 SRPK2P78362 688 aaKnown RBP31.36■■■□□ 2.61
SMARCC2-210ENST00000550519 STRN4Q9NRL3 753 aa31.36■■■□□ 2.61
SMARCC2-210ENST00000550519 USP19O94966 1318 aa31.35■■■□□ 2.61
SMARCC2-210ENST00000550519 PPIP5K1Q6PFW1 1433 aa31.33■■■□□ 2.61
SMARCC2-210ENST00000550519 CABP2Q9NPB3 220 aa31.33■■■□□ 2.61
SMARCC2-210ENST00000550519 CPDO75976 1380 aa31.32■■■□□ 2.6
SMARCC2-210ENST00000550519 L3MBTL2Q969R5 705 aa31.32■■■□□ 2.6
SMARCC2-210ENST00000550519 NRKQ7Z2Y5 1582 aa31.31■■■□□ 2.6
SMARCC2-210ENST00000550519 NLRP13Q86W25 1043 aa31.3■■■□□ 2.6
SMARCC2-210ENST00000550519 SSH2Q76I76 1423 aa31.3■■■□□ 2.6
SMARCC2-210ENST00000550519 EVA1CP58658 441 aa31.29■■■□□ 2.6
SMARCC2-210ENST00000550519 EN1Q05925 392 aaPredicted RBP31.29■■■□□ 2.6
SMARCC2-210ENST00000550519 BRD4O60885 1362 aaPredicted RBP31.29■■■□□ 2.6
SMARCC2-210ENST00000550519 DISP2A7MBM2 1401 aa31.28■■■□□ 2.6
SMARCC2-210ENST00000550519 BARGINQ6ZT62 677 aa31.28■■■□□ 2.6
SMARCC2-210ENST00000550519 CAMTA1Q9Y6Y1 1673 aa31.28■■■□□ 2.6
SMARCC2-210ENST00000550519 GCP02774 474 aa31.27■■■□□ 2.6
SMARCC2-210ENST00000550519 USP35Q9P2H5 1018 aa31.27■■■□□ 2.6
SMARCC2-210ENST00000550519 RGPD1P0DJD0 1748 aa31.27■■■□□ 2.6
SMARCC2-210ENST00000550519 LARP1Q6PKG0 1096 aaKnown RBP31.25■■■□□ 2.59
SMARCC2-210ENST00000550519 FAM196AQ6ZSG2 479 aa31.25■■■□□ 2.59
SMARCC2-210ENST00000550519 CABP1Q9NZU7 370 aa31.25■■■□□ 2.59
SMARCC2-210ENST00000550519 LMO7Q8WWI1 1683 aa31.24■■■□□ 2.59
SMARCC2-210ENST00000550519 QRICH2Q9H0J4 1663 aa31.23■■■□□ 2.59
SMARCC2-210ENST00000550519 PSDA5PKW4 1024 aaPredicted RBP31.23■■■□□ 2.59
SMARCC2-210ENST00000550519 SIN3AQ96ST3 1273 aa31.22■■■□□ 2.59
SMARCC2-210ENST00000550519 USP6P35125 1406 aa31.22■■■□□ 2.59
SMARCC2-210ENST00000550519 TCP11L2Q8N4U5 519 aa31.21■■■□□ 2.59
SMARCC2-210ENST00000550519 TRIM37O94972 964 aa31.2■■■□□ 2.59
SMARCC2-210ENST00000550519 TNS1Q9HBL0 1735 aaKnown RBP31.19■■■□□ 2.58
SMARCC2-210ENST00000550519 LRP5O75197 1615 aa31.19■■■□□ 2.58
SMARCC2-210ENST00000550519 EZH2Q15910 746 aaKnown RBP31.18■■■□□ 2.58
SMARCC2-210ENST00000550519 CAMKK2Q96RR4 588 aa31.18■■■□□ 2.58
SMARCC2-210ENST00000550519 THRAP3Q9Y2W1 955 aaKnown RBP31.18■■■□□ 2.58
SMARCC2-210ENST00000550519 EVC2Q86UK5 1308 aa31.18■■■□□ 2.58
SMARCC2-210ENST00000550519 NLRP6P59044 892 aa31.17■■■□□ 2.58
SMARCC2-210ENST00000550519 PDE3BQ13370 1112 aa31.17■■■□□ 2.58
SMARCC2-210ENST00000550519 COL5A2P05997 1499 aaPredicted RBP31.16■■■□□ 2.58
SMARCC2-210ENST00000550519 TRPM1Q7Z4N2 1603 aa31.15■■■□□ 2.58
SMARCC2-210ENST00000550519 ROCK2O75116 1388 aaKnown RBP31.13■■■□□ 2.57
SMARCC2-210ENST00000550519 AATKQ6ZMQ8 1374 aa31.13■■■□□ 2.57
SMARCC2-210ENST00000550519 SLIT3O75094 1523 aa31.13■■■□□ 2.57
SMARCC2-210ENST00000550519 APBA3O96018 575 aa31.12■■■□□ 2.57
SMARCC2-210ENST00000550519 NEUROD1Q13562 356 aa31.12■■■□□ 2.57
SMARCC2-210ENST00000550519 R3HDM1Q15032 1099 aaKnown RBP31.12■■■□□ 2.57
SMARCC2-210ENST00000550519 PARD3Q8TEW0 1356 aa31.11■■■□□ 2.57
SMARCC2-210ENST00000550519 CRB1P82279 1406 aa31.1■■■□□ 2.57
SMARCC2-210ENST00000550519 ZNF692Q9BU19 519 aaPredicted RBP31.09■■■□□ 2.57
SMARCC2-210ENST00000550519 ZBTB7CA1YPR0 619 aa31.07■■■□□ 2.56
SMARCC2-210ENST00000550519 PIK3C2AO00443 1686 aa31.06■■■□□ 2.56
SMARCC2-210ENST00000550519 TTC21BQ7Z4L5 1316 aa31.05■■■□□ 2.56
SMARCC2-210ENST00000550519 PARP4Q9UKK3 1724 aaKnown RBP31.04■■■□□ 2.56
SMARCC2-210ENST00000550519 AXIN2Q9Y2T1 843 aa31.03■■■□□ 2.56
SMARCC2-210ENST00000550519 C11orf95C9JLR9 678 aaPredicted RBP31.02■■■□□ 2.56
SMARCC2-210ENST00000550519 CPSF1Q10570 1443 aaKnown RBP31.01■■■□□ 2.55
SMARCC2-210ENST00000550519 ARHGEF25Q86VW2 580 aa31.01■■■□□ 2.55
SMARCC2-210ENST00000550519 TTC21AQ8NDW8 1320 aa31■■■□□ 2.55
SMARCC2-210ENST00000550519 COL18A1P39060 1754 aa31■■■□□ 2.55
SMARCC2-210ENST00000550519 TOM1L2Q6ZVM7 507 aa31■■■□□ 2.55
SMARCC2-210ENST00000550519 KCNH5Q8NCM2 988 aa31■■■□□ 2.55
SMARCC2-210ENST00000550519 WDR17Q8IZU2 1322 aa30.98■■■□□ 2.55
SMARCC2-210ENST00000550519 SBNO2Q9Y2G9 1366 aa30.97■■■□□ 2.55
SMARCC2-210ENST00000550519 OVOS2A0A0G2JMS6 1433 aa30.97■■■□□ 2.55
SMARCC2-210ENST00000550519 OVOS2A0A0J9YW53 1432 aa30.97■■■□□ 2.55
SMARCC2-210ENST00000550519 OVOS2Q6IE36 1432 aa30.97■■■□□ 2.55
SMARCC2-210ENST00000550519 DDB1Q16531 1140 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms