RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
ATXN2-220ENST00000550236 TOPAZ1Q8N9V7 1692 aa11.9□□□□□ -0.5
ATXN2-220ENST00000550236 SBNO1A3KN83 1393 aa11.9□□□□□ -0.5
ATXN2-220ENST00000550236 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
ATXN2-220ENST00000550236 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
ATXN2-220ENST00000550236 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
ATXN2-220ENST00000550236 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
ATXN2-220ENST00000550236 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
ATXN2-220ENST00000550236 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
ATXN2-220ENST00000550236 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
ATXN2-220ENST00000550236 CABP1Q9NZU7 370 aa11.88□□□□□ -0.51
ATXN2-220ENST00000550236 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
ATXN2-220ENST00000550236 ARHGEF10O15013 1369 aa11.87□□□□□ -0.51
ATXN2-220ENST00000550236 BCL9LQ86UU0 1499 aa11.87□□□□□ -0.51
ATXN2-220ENST00000550236 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
ATXN2-220ENST00000550236 RGS12O14924 1447 aa11.86□□□□□ -0.51
ATXN2-220ENST00000550236 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
ATXN2-220ENST00000550236 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
ATXN2-220ENST00000550236 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
ATXN2-220ENST00000550236 CHRNA2Q15822 529 aa11.85□□□□□ -0.51
ATXN2-220ENST00000550236 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
ATXN2-220ENST00000550236 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
ATXN2-220ENST00000550236 CRYBG1Q9Y4K1 1723 aa11.85□□□□□ -0.51
ATXN2-220ENST00000550236 ATRNO75882 1429 aa11.85□□□□□ -0.51
ATXN2-220ENST00000550236 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
ATXN2-220ENST00000550236 GJD4Q96KN9 370 aaPredicted RBP11.84□□□□□ -0.51
ATXN2-220ENST00000550236 BTG4Q9NY30 223 aa11.84□□□□□ -0.51
ATXN2-220ENST00000550236 POLR3AO14802 1390 aaPredicted RBP11.83□□□□□ -0.52
ATXN2-220ENST00000550236 PHRF1Q9P1Y6 1649 aaKnown RBP11.83□□□□□ -0.52
ATXN2-220ENST00000550236 SLIT2O94813 1529 aa11.83□□□□□ -0.52
ATXN2-220ENST00000550236 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
ATXN2-220ENST00000550236 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.83□□□□□ -0.52
ATXN2-220ENST00000550236 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
ATXN2-220ENST00000550236 A0A0G2JS52 829 aa11.82□□□□□ -0.52
ATXN2-220ENST00000550236 MYT1Q01538 1121 aa11.82□□□□□ -0.52
ATXN2-220ENST00000550236 CCER1Q8TC90 406 aaPredicted RBP11.82□□□□□ -0.52
ATXN2-220ENST00000550236 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
ATXN2-220ENST00000550236 PRDM11Q9NQV5 511 aa11.82□□□□□ -0.52
ATXN2-220ENST00000550236 GLI3P10071 1580 aa11.82□□□□□ -0.52
ATXN2-220ENST00000550236 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
ATXN2-220ENST00000550236 SOX12O15370 315 aa11.81□□□□□ -0.52
ATXN2-220ENST00000550236 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
ATXN2-220ENST00000550236 AKAP12Q02952 1782 aa11.81□□□□□ -0.52
ATXN2-220ENST00000550236 COL14A1Q05707 1796 aaKnown RBP11.81□□□□□ -0.52
ATXN2-220ENST00000550236 CDK12Q9NYV4 1490 aaPredicted RBP11.81□□□□□ -0.52
ATXN2-220ENST00000550236 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
ATXN2-220ENST00000550236 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
ATXN2-220ENST00000550236 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
ATXN2-220ENST00000550236 NLRP6P59044 892 aa11.8□□□□□ -0.52
ATXN2-220ENST00000550236 ZBTB22O15209 634 aa11.79□□□□□ -0.52
ATXN2-220ENST00000550236 VPS72Q15906 364 aa11.79□□□□□ -0.52
ATXN2-220ENST00000550236 USP6P35125 1406 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 EVA1CP58658 441 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
ATXN2-220ENST00000550236 NLRP13Q86W25 1043 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
ATXN2-220ENST00000550236 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 SLC12A5Q9H2X9 1139 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
ATXN2-220ENST00000550236 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
ATXN2-220ENST00000550236 GCP02774 474 aa11.77□□□□□ -0.53
ATXN2-220ENST00000550236 PIK3C2AO00443 1686 aa11.77□□□□□ -0.53
ATXN2-220ENST00000550236 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
ATXN2-220ENST00000550236 NRKQ7Z2Y5 1582 aa11.76□□□□□ -0.53
ATXN2-220ENST00000550236 FAM182BQ5T319 152 aa11.76□□□□□ -0.53
ATXN2-220ENST00000550236 TTC21BQ7Z4L5 1316 aa11.76□□□□□ -0.53
ATXN2-220ENST00000550236 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
ATXN2-220ENST00000550236 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
ATXN2-220ENST00000550236 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
ATXN2-220ENST00000550236 TESK2Q96S53 571 aa11.74□□□□□ -0.53
ATXN2-220ENST00000550236 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
ATXN2-220ENST00000550236 USP19O94966 1318 aa11.73□□□□□ -0.53
ATXN2-220ENST00000550236 SPATA31A5Q5VU36 1347 aa11.73□□□□□ -0.53
ATXN2-220ENST00000550236 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
ATXN2-220ENST00000550236 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
ATXN2-220ENST00000550236 NME9Q86XW9 330 aa11.73□□□□□ -0.53
ATXN2-220ENST00000550236 SPATA31A7Q8IWB4 1347 aa11.73□□□□□ -0.53
ATXN2-220ENST00000550236 USP47Q96K76 1375 aa11.73□□□□□ -0.53
ATXN2-220ENST00000550236 CPSF1Q10570 1443 aaKnown RBP11.72□□□□□ -0.53
ATXN2-220ENST00000550236 SBNO2Q9Y2G9 1366 aa11.72□□□□□ -0.53
ATXN2-220ENST00000550236 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
ATXN2-220ENST00000550236 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
ATXN2-220ENST00000550236 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.53
ATXN2-220ENST00000550236 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.53
ATXN2-220ENST00000550236 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.54
ATXN2-220ENST00000550236 SPATA31A1Q5TZJ5 1347 aa11.7□□□□□ -0.54
ATXN2-220ENST00000550236 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
ATXN2-220ENST00000550236 SLIT3O75094 1523 aa11.7□□□□□ -0.54
ATXN2-220ENST00000550236 COL18A1P39060 1754 aa11.69□□□□□ -0.54
ATXN2-220ENST00000550236 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
ATXN2-220ENST00000550236 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
ATXN2-220ENST00000550236 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
ATXN2-220ENST00000550236 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
ATXN2-220ENST00000550236 TMF1P82094 1093 aa11.69□□□□□ -0.54
ATXN2-220ENST00000550236 TERF2IPQ9NYB0 399 aa11.69□□□□□ -0.54
ATXN2-220ENST00000550236 LTN1O94822 1766 aa11.69□□□□□ -0.54
ATXN2-220ENST00000550236 CPDO75976 1380 aa11.68□□□□□ -0.54
ATXN2-220ENST00000550236 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
ATXN2-220ENST00000550236 FBLN1P23142 703 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms