RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PHRF1Q9P1Y6 1649 aaKnown RBP23.03■■□□□ 1.28
COX6A1-203ENST00000550009 EIF3AQ14152 1382 aaKnown RBP23.02■■□□□ 1.28
COX6A1-203ENST00000550009 PAK3O75914 559 aaPredicted RBP23.02■■□□□ 1.28
COX6A1-203ENST00000550009 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
COX6A1-203ENST00000550009 NUTM2GQ5VZR2 741 aa23.01■■□□□ 1.27
COX6A1-203ENST00000550009 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
COX6A1-203ENST00000550009 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
COX6A1-203ENST00000550009 ACEP12821 1306 aa22.98■■□□□ 1.27
COX6A1-203ENST00000550009 CENPJQ9HC77 1338 aaPredicted RBP22.98■■□□□ 1.27
COX6A1-203ENST00000550009 COL14A1Q05707 1796 aaKnown RBP22.98■■□□□ 1.27
COX6A1-203ENST00000550009 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.26
COX6A1-203ENST00000550009 ATAD2Q6PL18 1390 aa22.93■■□□□ 1.26
COX6A1-203ENST00000550009 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
COX6A1-203ENST00000550009 BTG4Q9NY30 223 aa22.93■■□□□ 1.26
COX6A1-203ENST00000550009 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
COX6A1-203ENST00000550009 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
COX6A1-203ENST00000550009 PLEKHG3A1L390 1219 aa22.92■■□□□ 1.26
COX6A1-203ENST00000550009 VPS72Q15906 364 aa22.92■■□□□ 1.26
COX6A1-203ENST00000550009 CCDC9Q9Y3X0 531 aaKnown RBP22.92■■□□□ 1.26
COX6A1-203ENST00000550009 CHRNA2Q15822 529 aa22.91■■□□□ 1.26
COX6A1-203ENST00000550009 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
COX6A1-203ENST00000550009 NRKQ7Z2Y5 1582 aa22.9■■□□□ 1.26
COX6A1-203ENST00000550009 SEPT12Q8IYM1 358 aa22.89■■□□□ 1.25
COX6A1-203ENST00000550009 KIAA0232Q92628 1395 aa22.89■■□□□ 1.25
COX6A1-203ENST00000550009 ZC3H6P61129 1189 aaKnown RBP22.88■■□□□ 1.25
COX6A1-203ENST00000550009 SRCAPQ6ZRS2 3230 aa22.87■■□□□ 1.25
COX6A1-203ENST00000550009 AKAP12Q02952 1782 aa22.87■■□□□ 1.25
COX6A1-203ENST00000550009 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
COX6A1-203ENST00000550009 PIK3C2AO00443 1686 aa22.85■■□□□ 1.25
COX6A1-203ENST00000550009 FAM98CQ17RN3 349 aaKnown RBP22.85■■□□□ 1.25
COX6A1-203ENST00000550009 PRDM11Q9NQV5 511 aa22.85■■□□□ 1.25
COX6A1-203ENST00000550009 ABTB2Q8N961 1025 aa22.83■■□□□ 1.25
COX6A1-203ENST00000550009 RGPD5Q99666 1765 aa22.82■■□□□ 1.24
COX6A1-203ENST00000550009 LMO7Q8WWI1 1683 aa22.82■■□□□ 1.24
COX6A1-203ENST00000550009 ONECUT3O60422 494 aaPredicted RBP22.82■■□□□ 1.24
COX6A1-203ENST00000550009 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
COX6A1-203ENST00000550009 THSD7AQ9UPZ6 1657 aa22.81■■□□□ 1.24
COX6A1-203ENST00000550009 CAMTA1Q9Y6Y1 1673 aa22.81■■□□□ 1.24
COX6A1-203ENST00000550009 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
COX6A1-203ENST00000550009 USP6P35125 1406 aa22.81■■□□□ 1.24
COX6A1-203ENST00000550009 STRN4Q9NRL3 753 aa22.8■■□□□ 1.24
COX6A1-203ENST00000550009 USP19O94966 1318 aa22.8■■□□□ 1.24
COX6A1-203ENST00000550009 SPATA31A5Q5VU36 1347 aa22.8■■□□□ 1.24
COX6A1-203ENST00000550009 SPATA31A7Q8IWB4 1347 aa22.8■■□□□ 1.24
COX6A1-203ENST00000550009 A0A0G2JS52 829 aa22.79■■□□□ 1.24
COX6A1-203ENST00000550009 MYT1Q01538 1121 aa22.79■■□□□ 1.24
COX6A1-203ENST00000550009 EVC2Q86UK5 1308 aa22.79■■□□□ 1.24
COX6A1-203ENST00000550009 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
COX6A1-203ENST00000550009 DEFB132Q7Z7B7 95 aa22.78■■□□□ 1.24
COX6A1-203ENST00000550009 KRT27Q7Z3Y8 459 aa22.77■■□□□ 1.24
COX6A1-203ENST00000550009 COL18A1P39060 1754 aa22.76■■□□□ 1.23
COX6A1-203ENST00000550009 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
COX6A1-203ENST00000550009 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
COX6A1-203ENST00000550009 CARD11Q9BXL7 1154 aa22.74■■□□□ 1.23
COX6A1-203ENST00000550009 USP35Q9P2H5 1018 aa22.74■■□□□ 1.23
COX6A1-203ENST00000550009 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
COX6A1-203ENST00000550009 SLIT3O75094 1523 aa22.73■■□□□ 1.23
COX6A1-203ENST00000550009 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
COX6A1-203ENST00000550009 GCP02774 474 aa22.73■■□□□ 1.23
COX6A1-203ENST00000550009 LARP1Q6PKG0 1096 aaKnown RBP22.73■■□□□ 1.23
COX6A1-203ENST00000550009 ZRANB1Q9UGI0 708 aa22.72■■□□□ 1.23
COX6A1-203ENST00000550009 BLMP54132 1417 aaPredicted RBP22.72■■□□□ 1.23
COX6A1-203ENST00000550009 TNS1Q9HBL0 1735 aaKnown RBP22.71■■□□□ 1.23
COX6A1-203ENST00000550009 NLRP6P59044 892 aa22.71■■□□□ 1.23
COX6A1-203ENST00000550009 NLRP13Q86W25 1043 aa22.71■■□□□ 1.23
COX6A1-203ENST00000550009 CPDO75976 1380 aa22.71■■□□□ 1.23
COX6A1-203ENST00000550009 CD163L1Q9NR16 1453 aa22.7■■□□□ 1.22
COX6A1-203ENST00000550009 CPSF1Q10570 1443 aaKnown RBP22.69■■□□□ 1.22
COX6A1-203ENST00000550009 TTC21BQ7Z4L5 1316 aa22.69■■□□□ 1.22
COX6A1-203ENST00000550009 COL5A2P05997 1499 aaPredicted RBP22.67■■□□□ 1.22
COX6A1-203ENST00000550009 SOX12O15370 315 aa22.67■■□□□ 1.22
COX6A1-203ENST00000550009 EVA1CP58658 441 aa22.67■■□□□ 1.22
COX6A1-203ENST00000550009 CCDC125Q86Z20 511 aa22.67■■□□□ 1.22
COX6A1-203ENST00000550009 RGPD1P0DJD0 1748 aa22.67■■□□□ 1.22
COX6A1-203ENST00000550009 SBNO2Q9Y2G9 1366 aa22.65■■□□□ 1.22
COX6A1-203ENST00000550009 AXIN2Q9Y2T1 843 aa22.65■■□□□ 1.22
COX6A1-203ENST00000550009 WNK3Q9BYP7 1800 aa22.65■■□□□ 1.22
COX6A1-203ENST00000550009 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.21
COX6A1-203ENST00000550009 BRD4O60885 1362 aaPredicted RBP22.63■■□□□ 1.21
COX6A1-203ENST00000550009 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
COX6A1-203ENST00000550009 NFAT5O94916 1531 aa22.63■■□□□ 1.21
COX6A1-203ENST00000550009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
COX6A1-203ENST00000550009 LTN1O94822 1766 aa22.63■■□□□ 1.21
COX6A1-203ENST00000550009 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
COX6A1-203ENST00000550009 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
COX6A1-203ENST00000550009 TESK2Q96S53 571 aa22.61■■□□□ 1.21
COX6A1-203ENST00000550009 NME9Q86XW9 330 aa22.6■■□□□ 1.21
COX6A1-203ENST00000550009 TMC1Q8TDI8 760 aa22.6■■□□□ 1.21
COX6A1-203ENST00000550009 USP54Q70EL1 1684 aa22.6■■□□□ 1.21
COX6A1-203ENST00000550009 SBF2Q86WG5 1849 aa22.59■■□□□ 1.21
COX6A1-203ENST00000550009 EN1Q05925 392 aaPredicted RBP22.59■■□□□ 1.21
COX6A1-203ENST00000550009 ZNF692Q9BU19 519 aaPredicted RBP22.59■■□□□ 1.21
COX6A1-203ENST00000550009 AATKQ6ZMQ8 1374 aa22.59■■□□□ 1.21
COX6A1-203ENST00000550009 LRRC37A3O60309 1634 aa22.58■■□□□ 1.21
COX6A1-203ENST00000550009 SF3B2Q13435 895 aaKnown RBP22.58■■□□□ 1.21
COX6A1-203ENST00000550009 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
COX6A1-203ENST00000550009 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
COX6A1-203ENST00000550009 TRIM37O94972 964 aa22.57■■□□□ 1.2
COX6A1-203ENST00000550009 ARHGEF25Q86VW2 580 aa22.57■■□□□ 1.2
COX6A1-203ENST00000550009 A0A1W2PP64 1363 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms