RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 TRPM2O94759 1503 aa10.06□□□□□ -0.8
TMEM116-208ENST00000549537 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
TMEM116-208ENST00000549537 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
TMEM116-208ENST00000549537 TOM1O60784 492 aa10.05□□□□□ -0.8
TMEM116-208ENST00000549537 KCNA6P17658 529 aa10.05□□□□□ -0.8
TMEM116-208ENST00000549537 ARSIQ5FYB1 569 aa10.05□□□□□ -0.8
TMEM116-208ENST00000549537 ADAMTS13Q76LX8 1427 aa10.05□□□□□ -0.8
TMEM116-208ENST00000549537 CHD2O14647 1828 aaKnown RBP10.05□□□□□ -0.8
TMEM116-208ENST00000549537 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
TMEM116-208ENST00000549537 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-208ENST00000549537 BCANQ96GW7 911 aa10.04□□□□□ -0.8
TMEM116-208ENST00000549537 DIP2AQ14689 1571 aa10.04□□□□□ -0.8
TMEM116-208ENST00000549537 NRXN3Q9Y4C0 1643 aa10.04□□□□□ -0.8
TMEM116-208ENST00000549537 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
TMEM116-208ENST00000549537 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
TMEM116-208ENST00000549537 TMEM94Q12767 1356 aa10.02□□□□□ -0.8
TMEM116-208ENST00000549537 SETBP1Q9Y6X0 1596 aa10.02□□□□□ -0.81
TMEM116-208ENST00000549537 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
TMEM116-208ENST00000549537 HDGFP51858 240 aaKnown RBP10.02□□□□□ -0.81
TMEM116-208ENST00000549537 PIP4K2BP78356 416 aa10.02□□□□□ -0.81
TMEM116-208ENST00000549537 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMEM116-208ENST00000549537 TBX22Q9Y458 520 aa10.02□□□□□ -0.81
TMEM116-208ENST00000549537 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.81
TMEM116-208ENST00000549537 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
TMEM116-208ENST00000549537 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
TMEM116-208ENST00000549537 PBX2P40425 430 aa10□□□□□ -0.81
TMEM116-208ENST00000549537 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
TMEM116-208ENST00000549537 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
TMEM116-208ENST00000549537 RGS17Q9UGC6 210 aaPredicted RBP10□□□□□ -0.81
TMEM116-208ENST00000549537 KIF1BO60333 1816 aa10□□□□□ -0.81
TMEM116-208ENST00000549537 PIK3R4Q99570 1358 aa10□□□□□ -0.81
TMEM116-208ENST00000549537 PTPRUQ92729 1446 aa9.99□□□□□ -0.81
TMEM116-208ENST00000549537 PROSER2Q86WR7 435 aaPredicted RBP9.99□□□□□ -0.81
TMEM116-208ENST00000549537 XRN1Q8IZH2 1706 aaKnown RBP9.99□□□□□ -0.81
TMEM116-208ENST00000549537 STK25O00506 426 aa9.98□□□□□ -0.81
TMEM116-208ENST00000549537 TRIM52Q96A61 297 aa9.98□□□□□ -0.81
TMEM116-208ENST00000549537 RBM33Q96EV2 1170 aaKnown RBP9.98□□□□□ -0.81
TMEM116-208ENST00000549537 FAM135BQ49AJ0 1406 aa9.98□□□□□ -0.81
TMEM116-208ENST00000549537 NCOA3Q9Y6Q9 1424 aa9.98□□□□□ -0.81
TMEM116-208ENST00000549537 SETD1AO15047 1707 aaKnown RBP9.97□□□□□ -0.81
TMEM116-208ENST00000549537 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
TMEM116-208ENST00000549537 ROBO1Q9Y6N7 1651 aa9.96□□□□□ -0.81
TMEM116-208ENST00000549537 KIF3CO14782 793 aa9.96□□□□□ -0.82
TMEM116-208ENST00000549537 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.82
TMEM116-208ENST00000549537 PPLO60437 1756 aa9.96□□□□□ -0.82
TMEM116-208ENST00000549537 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
TMEM116-208ENST00000549537 SLC34A2O95436 690 aa9.95□□□□□ -0.82
TMEM116-208ENST00000549537 ZNF326Q5BKZ1 582 aaKnown RBP9.95□□□□□ -0.82
TMEM116-208ENST00000549537 METP08581 1390 aa9.95□□□□□ -0.82
TMEM116-208ENST00000549537 MSH6P52701 1360 aa9.95□□□□□ -0.82
TMEM116-208ENST00000549537 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-208ENST00000549537 SETD5Q9C0A6 1442 aa9.94□□□□□ -0.82
TMEM116-208ENST00000549537 C2orf72A6NCS6 295 aa9.94□□□□□ -0.82
TMEM116-208ENST00000549537 MPHOSPH9Q99550 1183 aa9.94□□□□□ -0.82
TMEM116-208ENST00000549537 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
TMEM116-208ENST00000549537 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
TMEM116-208ENST00000549537 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
TMEM116-208ENST00000549537 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
TMEM116-208ENST00000549537 KHSRPQ92945 711 aaKnown RBP eCLIP9.93□□□□□ -0.828e-7■■□□□ 12.4
TMEM116-208ENST00000549537 ARXQ96QS3 562 aa9.93□□□□□ -0.82
TMEM116-208ENST00000549537 AMOTL2Q9Y2J4 779 aa9.93□□□□□ -0.82
TMEM116-208ENST00000549537 PRAG1Q86YV5 1406 aa9.92□□□□□ -0.82
TMEM116-208ENST00000549537 RPGRIP1LQ68CZ1 1315 aa9.92□□□□□ -0.82
TMEM116-208ENST00000549537 PSDA5PKW4 1024 aaPredicted RBP9.92□□□□□ -0.82
TMEM116-208ENST00000549537 NUDT7P0C024 238 aa9.92□□□□□ -0.82
TMEM116-208ENST00000549537 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
TMEM116-208ENST00000549537 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
TMEM116-208ENST00000549537 RAB3GAP2Q9H2M9 1393 aa9.91□□□□□ -0.82
TMEM116-208ENST00000549537 RGL2O15211 777 aa9.91□□□□□ -0.82
TMEM116-208ENST00000549537 SLAIN2Q9P270 581 aa9.91□□□□□ -0.82
TMEM116-208ENST00000549537 CCDC144AA2RUR9 1427 aa9.9□□□□□ -0.82
TMEM116-208ENST00000549537 DCCP43146 1447 aa9.9□□□□□ -0.82
TMEM116-208ENST00000549537 NALCNQ8IZF0 1738 aa9.9□□□□□ -0.82
TMEM116-208ENST00000549537 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
TMEM116-208ENST00000549537 C19orf44Q9H6X5 657 aa9.9□□□□□ -0.82
TMEM116-208ENST00000549537 COL16A1Q07092 1604 aaPredicted RBP9.89□□□□□ -0.83
TMEM116-208ENST00000549537 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
TMEM116-208ENST00000549537 PCDHGA4Q9Y5G9 962 aa9.89□□□□□ -0.83
TMEM116-208ENST00000549537 PHLPP1O60346 1717 aa9.89□□□□□ -0.83
TMEM116-208ENST00000549537 PTCH1Q13635 1447 aa9.89□□□□□ -0.83
TMEM116-208ENST00000549537 AHDC1Q5TGY3 1603 aaPredicted RBP9.89□□□□□ -0.83
TMEM116-208ENST00000549537 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
TMEM116-208ENST00000549537 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
TMEM116-208ENST00000549537 MST1RQ04912 1400 aa9.88□□□□□ -0.83
TMEM116-208ENST00000549537 ADGRL3Q9HAR2 1447 aa9.88□□□□□ -0.83
TMEM116-208ENST00000549537 ADGRF5Q8IZF2 1346 aa9.87□□□□□ -0.83
TMEM116-208ENST00000549537 ROBO2Q9HCK4 1378 aa9.87□□□□□ -0.83
TMEM116-208ENST00000549537 ASXL1Q8IXJ9 1541 aa9.87□□□□□ -0.83
TMEM116-208ENST00000549537 PIK3C2GO75747 1445 aa9.86□□□□□ -0.83
TMEM116-208ENST00000549537 ATF3P18847 181 aa9.86□□□□□ -0.83
TMEM116-208ENST00000549537 C14orf37Q86TY3 774 aa9.86□□□□□ -0.83
TMEM116-208ENST00000549537 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
TMEM116-208ENST00000549537 ANKRD30BQ9BXX2 1392 aa9.86□□□□□ -0.83
TMEM116-208ENST00000549537 NHSL1Q5SYE7 1610 aa9.85□□□□□ -0.83
TMEM116-208ENST00000549537 NRXN1Q9ULB1 1477 aa9.85□□□□□ -0.83
TMEM116-208ENST00000549537 RGL3Q3MIN7 710 aa9.85□□□□□ -0.83
TMEM116-208ENST00000549537 BRINP3Q76B58 766 aa9.85□□□□□ -0.83
TMEM116-208ENST00000549537 TECPR2O15040 1411 aa9.84□□□□□ -0.83
TMEM116-208ENST00000549537 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
TMEM116-208ENST00000549537 HRCP23327 699 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms