RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 RPIAP49247 311 aa9.46□□□□□ -0.9
PRDM4-204ENST00000549416 ZBTB24O43167 697 aaPredicted RBP9.45□□□□□ -0.9
PRDM4-204ENST00000549416 IRF5Q13568 498 aa9.45□□□□□ -0.9
PRDM4-204ENST00000549416 BAP1Q92560 729 aa9.45□□□□□ -0.9
PRDM4-204ENST00000549416 A6NJR5 290 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 ABL2P42684 1182 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 TRIM32Q13049 653 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 ARMC2Q8NEN0 867 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 ZMYND15Q9H091 742 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 PRM3Q9NNZ6 103 aa9.44□□□□□ -0.9
PRDM4-204ENST00000549416 ZC3H4Q9UPT8 1303 aaKnown RBP9.43□□□□□ -0.9
PRDM4-204ENST00000549416 RAD21O60216 631 aa9.43□□□□□ -0.9
PRDM4-204ENST00000549416 SLC19A1P41440 591 aa9.43□□□□□ -0.9
PRDM4-204ENST00000549416 SH3BP2P78314 561 aa9.42□□□□□ -0.9
PRDM4-204ENST00000549416 SKOR1P84550 965 aa9.42□□□□□ -0.9
PRDM4-204ENST00000549416 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
PRDM4-204ENST00000549416 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
PRDM4-204ENST00000549416 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
PRDM4-204ENST00000549416 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
PRDM4-204ENST00000549416 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
PRDM4-204ENST00000549416 NBPF14Q5TI25 921 aa9.41□□□□□ -0.9
PRDM4-204ENST00000549416 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
PRDM4-204ENST00000549416 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
PRDM4-204ENST00000549416 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
PRDM4-204ENST00000549416 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
PRDM4-204ENST00000549416 SH3BP5LQ7L8J4 393 aa9.4□□□□□ -0.9
PRDM4-204ENST00000549416 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
PRDM4-204ENST00000549416 FOXJ1Q92949 421 aa9.4□□□□□ -0.9
PRDM4-204ENST00000549416 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
PRDM4-204ENST00000549416 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
PRDM4-204ENST00000549416 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
PRDM4-204ENST00000549416 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
PRDM4-204ENST00000549416 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
PRDM4-204ENST00000549416 WNT7BP56706 349 aa9.37□□□□□ -0.91
PRDM4-204ENST00000549416 GPSM3Q9Y4H4 160 aa9.37□□□□□ -0.91
PRDM4-204ENST00000549416 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
PRDM4-204ENST00000549416 TRAK2O60296 914 aa9.36□□□□□ -0.91
PRDM4-204ENST00000549416 PTK2Q05397 1052 aa9.36□□□□□ -0.91
PRDM4-204ENST00000549416 VAC14Q08AM6 782 aa9.36□□□□□ -0.91
PRDM4-204ENST00000549416 NR1H3Q13133 447 aa9.36□□□□□ -0.91
PRDM4-204ENST00000549416 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
PRDM4-204ENST00000549416 ARHGAP9Q9BRR9 750 aa9.36□□□□□ -0.91
PRDM4-204ENST00000549416 ZNF697Q5TEC3 545 aa9.35□□□□□ -0.91
PRDM4-204ENST00000549416 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
PRDM4-204ENST00000549416 POM121CA8CG34 1229 aa9.34□□□□□ -0.91
PRDM4-204ENST00000549416 AGERQ15109 404 aa9.34□□□□□ -0.91
PRDM4-204ENST00000549416 WASHC4Q2M389 1173 aa9.34□□□□□ -0.91
PRDM4-204ENST00000549416 RC3H1Q5TC82 1133 aaKnown RBP9.34□□□□□ -0.91
PRDM4-204ENST00000549416 MAGEB6P1A0A0J9YX57 407 aa9.33□□□□□ -0.92
PRDM4-204ENST00000549416 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
PRDM4-204ENST00000549416 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
PRDM4-204ENST00000549416 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
PRDM4-204ENST00000549416 ZNF330Q9Y3S2 320 aaPredicted RBP9.33□□□□□ -0.92
PRDM4-204ENST00000549416 WNT7AO00755 349 aa9.32□□□□□ -0.92
PRDM4-204ENST00000549416 RGS20O76081 388 aa9.32□□□□□ -0.92
PRDM4-204ENST00000549416 ERFEQ4G0M1 354 aa9.32□□□□□ -0.92
PRDM4-204ENST00000549416 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
PRDM4-204ENST00000549416 PKD2L1Q9P0L9 805 aa9.32□□□□□ -0.92
PRDM4-204ENST00000549416 VARSP26640 1264 aaKnown RBP9.31□□□□□ -0.92
PRDM4-204ENST00000549416 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
PRDM4-204ENST00000549416 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
PRDM4-204ENST00000549416 SIAH2O43255 324 aa9.3□□□□□ -0.92
PRDM4-204ENST00000549416 GDF9O60383 454 aa9.3□□□□□ -0.92
PRDM4-204ENST00000549416 MRGPRX2Q96LB1 330 aa9.3□□□□□ -0.92
PRDM4-204ENST00000549416 TRIM67Q6ZTA4 783 aa9.29□□□□□ -0.92
PRDM4-204ENST00000549416 ADAMTS19Q8TE59 1207 aa9.29□□□□□ -0.92
PRDM4-204ENST00000549416 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
PRDM4-204ENST00000549416 FOXC1Q12948 553 aa9.28□□□□□ -0.92
PRDM4-204ENST00000549416 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
PRDM4-204ENST00000549416 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
PRDM4-204ENST00000549416 ALG2Q9H553 416 aa9.27□□□□□ -0.93
PRDM4-204ENST00000549416 PCDHB9Q9Y5E1 797 aa9.27□□□□□ -0.93
PRDM4-204ENST00000549416 EIF4G2P78344 907 aaKnown RBP eCLIP9.26□□□□□ -0.93
PRDM4-204ENST00000549416 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
PRDM4-204ENST00000549416 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
PRDM4-204ENST00000549416 TNFRSF10AO00220 468 aa9.25□□□□□ -0.93
PRDM4-204ENST00000549416 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
PRDM4-204ENST00000549416 DZIP3Q86Y13 1208 aaKnown RBP9.25□□□□□ -0.93
PRDM4-204ENST00000549416 SOX11P35716 441 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 MPNDQ8N594 471 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 GLMNQ92990 594 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 SLC10A4Q96EP9 437 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 CDK15Q96Q40 435 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
PRDM4-204ENST00000549416 PRR20EP86478 221 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 PRR20CP86479 221 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 PRR20DP86480 221 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 PRR20BP86481 221 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 PRR20AP86496 221 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 MAP4K5Q9Y4K4 846 aa9.23□□□□□ -0.93
PRDM4-204ENST00000549416 GRM5P41594 1212 aa9.22□□□□□ -0.93
PRDM4-204ENST00000549416 MCCD1P59942 119 aaPredicted RBP9.22□□□□□ -0.93
PRDM4-204ENST00000549416 ARID5BQ14865 1188 aa9.22□□□□□ -0.93
PRDM4-204ENST00000549416 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
PRDM4-204ENST00000549416 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
PRDM4-204ENST00000549416 SNIP1Q8TAD8 396 aaKnown RBP9.21□□□□□ -0.94
PRDM4-204ENST00000549416 ESPNB1AK53 854 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms