RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.6
PPFIA2-216ENST00000549396 MSH5O43196 834 aa11.27□□□□□ -0.6
PPFIA2-216ENST00000549396 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.6
PPFIA2-216ENST00000549396 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.6
PPFIA2-216ENST00000549396 HOOK1Q9UJC3 728 aaKnown RBP11.27□□□□□ -0.6
PPFIA2-216ENST00000549396 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 CTDP1Q9Y5B0 961 aaPredicted RBP11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 TOM1L2Q6ZVM7 507 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 MSH6P52701 1360 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 PSMA5P28066 241 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 FAM184AQ8NB25 1140 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 SRCIN1Q9C0H9 1055 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
PPFIA2-216ENST00000549396 SYTL4Q96C24 671 aaPredicted RBP11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 NBPF1Q3BBV0 1214 aa11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 NOS1P29475 1434 aa11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 MAPKBP1O60336 1514 aa11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 MCM2P49736 904 aa11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 ZSCAN25Q6NSZ9 544 aa11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 CNTROBQ8N137 903 aa11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 TEX13AQ9BXU3 409 aaPredicted RBP11.26□□□□□ -0.61
PPFIA2-216ENST00000549396 TPM2P07951 284 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 ARHGEF5Q12774 1597 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 NBPF8Q3BBV2 869 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 CLASRPQ8N2M8 674 aaKnown RBP11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 TOMM22Q9NS69 142 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 TRPM2O94759 1503 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 IPO9Q96P70 1041 aaKnown RBP11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 ZNF652Q9Y2D9 606 aa11.25□□□□□ -0.61
PPFIA2-216ENST00000549396 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 H3BQV1 296 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 MARCH6O60337 910 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 HMOX1P09601 288 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 HSP90AB3PQ58FF7 597 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 GNAI2P04899 355 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 RILPL2Q969X0 211 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 CRBNQ96SW2 442 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 CDC45O75419 566 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
PPFIA2-216ENST00000549396 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 MAST1Q9Y2H9 1570 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 SF3A1Q15459 793 aaKnown RBP11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 ADAMTS8Q9UP79 889 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 MAGI2Q86UL8 1455 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 STARD3NLO95772 234 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 XBP1P17861 261 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 IDI1Q13907 227 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 RASSF8Q8NHQ8 419 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 IFT57Q9NWB7 429 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 ATP7AQ04656 1500 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
PPFIA2-216ENST00000549396 SART3Q15020 963 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 DRC7Q8IY82 874 aa11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 SLC26A8Q96RN1 970 aa11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 IL16Q14005 1332 aa11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 ELL2O00472 640 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 SULT6B1Q6IMI4 303 aa11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 HDGFL1Q5TGJ6 251 aa11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-216ENST00000549396 NUCB2P80303 420 aa11.21□□□□□ -0.62
PPFIA2-216ENST00000549396 SAFBQ15424 915 aaKnown RBP eCLIP11.21□□□□□ -0.62
PPFIA2-216ENST00000549396 SOS1Q07889 1333 aaPredicted RBP11.21□□□□□ -0.62
PPFIA2-216ENST00000549396 CCDC158Q5M9N0 1113 aa11.21□□□□□ -0.62
PPFIA2-216ENST00000549396 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 ZFYVE9O95405 1425 aa11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 CPLX1O14810 134 aa11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 RALYLQ86SE5 291 aaKnown RBP11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 A0A087WZG4 1122 aa11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 RPAP2Q8IXW5 612 aaPredicted RBP11.2□□□□□ -0.62
PPFIA2-216ENST00000549396 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
PPFIA2-216ENST00000549396 ZFYVE16Q7Z3T8 1539 aa11.19□□□□□ -0.62
PPFIA2-216ENST00000549396 TCEAL9Q9UHQ7 104 aa11.19□□□□□ -0.62
PPFIA2-216ENST00000549396 ANO2Q9NQ90 1003 aa11.19□□□□□ -0.62
PPFIA2-216ENST00000549396 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
PPFIA2-216ENST00000549396 ANKRD20A12PQ8NF67 263 aa11.18□□□□□ -0.62
PPFIA2-216ENST00000549396 TOM1O60784 492 aa11.18□□□□□ -0.62
PPFIA2-216ENST00000549396 TPM1P09493 284 aa11.18□□□□□ -0.62
PPFIA2-216ENST00000549396 TPM3P06753 285 aa11.18□□□□□ -0.62
PPFIA2-216ENST00000549396 EXOC6Q8TAG9 804 aa11.18□□□□□ -0.62
PPFIA2-216ENST00000549396 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 CLSTN1O94985 981 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 ANKRD1Q15327 319 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms