RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 CRYBG1Q9Y4K1 1723 aa28.15■■■□□ 2.1
SLC48A1-207ENST00000549243 FAM83GA6ND36 823 aa28.14■■■□□ 2.1
SLC48A1-207ENST00000549243 CCDC9Q9Y3X0 531 aaKnown RBP28.12■■■□□ 2.09
SLC48A1-207ENST00000549243 CCDC61Q9Y6R9 512 aa28.12■■■□□ 2.09
SLC48A1-207ENST00000549243 BRWD3Q6RI45 1802 aa28.12■■■□□ 2.09
SLC48A1-207ENST00000549243 SRPK2P78362 688 aaKnown RBP28.11■■■□□ 2.09
SLC48A1-207ENST00000549243 ACEP12821 1306 aa28.11■■■□□ 2.09
SLC48A1-207ENST00000549243 NRAPQ86VF7 1730 aa28.1■■■□□ 2.09
SLC48A1-207ENST00000549243 COL14A1Q05707 1796 aaKnown RBP28.1■■■□□ 2.09
SLC48A1-207ENST00000549243 VPS72Q15906 364 aa28.09■■■□□ 2.09
SLC48A1-207ENST00000549243 POLR3AO14802 1390 aaPredicted RBP28.09■■■□□ 2.09
SLC48A1-207ENST00000549243 NUTM2GQ5VZR2 741 aa28.08■■■□□ 2.09
SLC48A1-207ENST00000549243 CABP2Q9NPB3 220 aa28.08■■■□□ 2.09
SLC48A1-207ENST00000549243 NBPF8Q3BBV2 869 aa28.07■■■□□ 2.08
SLC48A1-207ENST00000549243 BTG4Q9NY30 223 aa28.07■■■□□ 2.08
SLC48A1-207ENST00000549243 EP400Q96L91 3159 aa28.07■■■□□ 2.08
SLC48A1-207ENST00000549243 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
SLC48A1-207ENST00000549243 PLEKHG3A1L390 1219 aa28.06■■■□□ 2.08
SLC48A1-207ENST00000549243 ROCK2O75116 1388 aaKnown RBP28.05■■■□□ 2.08
SLC48A1-207ENST00000549243 PPIP5K1Q6PFW1 1433 aa28.05■■■□□ 2.08
SLC48A1-207ENST00000549243 SEPT12Q8IYM1 358 aa28.02■■■□□ 2.08
SLC48A1-207ENST00000549243 PRDM11Q9NQV5 511 aa28.02■■■□□ 2.08
SLC48A1-207ENST00000549243 KIAA0232Q92628 1395 aa27.99■■■□□ 2.07
SLC48A1-207ENST00000549243 A0A0G2JS52 829 aa27.98■■■□□ 2.07
SLC48A1-207ENST00000549243 ZC3H6P61129 1189 aaKnown RBP27.98■■■□□ 2.07
SLC48A1-207ENST00000549243 MYT1Q01538 1121 aa27.98■■■□□ 2.07
SLC48A1-207ENST00000549243 ABTB2Q8N961 1025 aa27.98■■■□□ 2.07
SLC48A1-207ENST00000549243 CHRNA2Q15822 529 aa27.97■■■□□ 2.07
SLC48A1-207ENST00000549243 CABP1Q9NZU7 370 aa27.96■■■□□ 2.07
SLC48A1-207ENST00000549243 EVC2Q86UK5 1308 aa27.95■■■□□ 2.07
SLC48A1-207ENST00000549243 ONECUT3O60422 494 aaPredicted RBP27.95■■■□□ 2.06
SLC48A1-207ENST00000549243 FAM98CQ17RN3 349 aaKnown RBP27.95■■■□□ 2.06
SLC48A1-207ENST00000549243 NRKQ7Z2Y5 1582 aa27.94■■■□□ 2.06
SLC48A1-207ENST00000549243 TRIM26Q12899 539 aaPredicted RBP27.94■■■□□ 2.06
SLC48A1-207ENST00000549243 TONSLQ96HA7 1378 aa27.92■■■□□ 2.06
SLC48A1-207ENST00000549243 KRT27Q7Z3Y8 459 aa27.91■■■□□ 2.06
SLC48A1-207ENST00000549243 CCDC125Q86Z20 511 aa27.91■■■□□ 2.06
SLC48A1-207ENST00000549243 SPATA31A5Q5VU36 1347 aa27.91■■■□□ 2.06
SLC48A1-207ENST00000549243 SPATA31A7Q8IWB4 1347 aa27.91■■■□□ 2.06
SLC48A1-207ENST00000549243 STRN4Q9NRL3 753 aa27.9■■■□□ 2.06
SLC48A1-207ENST00000549243 USP6P35125 1406 aa27.89■■■□□ 2.06
SLC48A1-207ENST00000549243 NLRP13Q86W25 1043 aa27.88■■■□□ 2.05
SLC48A1-207ENST00000549243 USP19O94966 1318 aa27.88■■■□□ 2.05
SLC48A1-207ENST00000549243 BLMP54132 1417 aaPredicted RBP27.87■■■□□ 2.05
SLC48A1-207ENST00000549243 CARD11Q9BXL7 1154 aa27.87■■■□□ 2.05
SLC48A1-207ENST00000549243 AKAP12Q02952 1782 aa27.86■■■□□ 2.05
SLC48A1-207ENST00000549243 BRD4O60885 1362 aaPredicted RBP27.86■■■□□ 2.05
SLC48A1-207ENST00000549243 PIK3C2AO00443 1686 aa27.84■■■□□ 2.05
SLC48A1-207ENST00000549243 THSD7AQ9UPZ6 1657 aa27.84■■■□□ 2.05
SLC48A1-207ENST00000549243 GCP02774 474 aa27.83■■■□□ 2.05
SLC48A1-207ENST00000549243 NLRP6P59044 892 aa27.83■■■□□ 2.05
SLC48A1-207ENST00000549243 LMO7Q8WWI1 1683 aa27.83■■■□□ 2.05
SLC48A1-207ENST00000549243 CAMTA1Q9Y6Y1 1673 aa27.83■■■□□ 2.05
SLC48A1-207ENST00000549243 ZBTB7CA1YPR0 619 aa27.82■■■□□ 2.04
SLC48A1-207ENST00000549243 EVA1CP58658 441 aa27.82■■■□□ 2.04
SLC48A1-207ENST00000549243 SPATA31A1Q5TZJ5 1347 aa27.82■■■□□ 2.04
SLC48A1-207ENST00000549243 CPDO75976 1380 aa27.82■■■□□ 2.04
SLC48A1-207ENST00000549243 SF3B2Q13435 895 aaKnown RBP27.81■■■□□ 2.04
SLC48A1-207ENST00000549243 FAM182BQ5T319 152 aa27.81■■■□□ 2.04
SLC48A1-207ENST00000549243 USP35Q9P2H5 1018 aa27.81■■■□□ 2.04
SLC48A1-207ENST00000549243 DEFB132Q7Z7B7 95 aa27.8■■■□□ 2.04
SLC48A1-207ENST00000549243 SSH2Q76I76 1423 aa27.8■■■□□ 2.04
SLC48A1-207ENST00000549243 SLIT3O75094 1523 aa27.77■■■□□ 2.04
SLC48A1-207ENST00000549243 LARP1Q6PKG0 1096 aaKnown RBP27.77■■■□□ 2.04
SLC48A1-207ENST00000549243 ZRANB1Q9UGI0 708 aa27.77■■■□□ 2.04
SLC48A1-207ENST00000549243 SBNO2Q9Y2G9 1366 aa27.76■■■□□ 2.03
SLC48A1-207ENST00000549243 ZNF692Q9BU19 519 aaPredicted RBP27.76■■■□□ 2.03
SLC48A1-207ENST00000549243 TTC21BQ7Z4L5 1316 aa27.75■■■□□ 2.03
SLC48A1-207ENST00000549243 MON2Q7Z3U7 1717 aa27.74■■■□□ 2.03
SLC48A1-207ENST00000549243 KTN1Q86UP2 1357 aaKnown RBP27.73■■■□□ 2.03
SLC48A1-207ENST00000549243 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
SLC48A1-207ENST00000549243 RGPD1P0DJD0 1748 aa27.72■■■□□ 2.03
SLC48A1-207ENST00000549243 COL5A2P05997 1499 aaPredicted RBP27.72■■■□□ 2.03
SLC48A1-207ENST00000549243 SOX12O15370 315 aa27.71■■■□□ 2.03
SLC48A1-207ENST00000549243 COL18A1P39060 1754 aa27.7■■■□□ 2.02
SLC48A1-207ENST00000549243 RGPD5Q99666 1765 aa27.69■■■□□ 2.02
SLC48A1-207ENST00000549243 TMC1Q8TDI8 760 aa27.69■■■□□ 2.02
SLC48A1-207ENST00000549243 TTC21AQ8NDW8 1320 aa27.68■■■□□ 2.02
SLC48A1-207ENST00000549243 BARGINQ6ZT62 677 aa27.68■■■□□ 2.02
SLC48A1-207ENST00000549243 TCP11L2Q8N4U5 519 aa27.68■■■□□ 2.02
SLC48A1-207ENST00000549243 BAG6P46379 1132 aa27.67■■■□□ 2.02
SLC48A1-207ENST00000549243 AATKQ6ZMQ8 1374 aa27.67■■■□□ 2.02
SLC48A1-207ENST00000549243 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
SLC48A1-207ENST00000549243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.66■■■□□ 2.02
SLC48A1-207ENST00000549243 CD163L1Q9NR16 1453 aa27.65■■■□□ 2.02
SLC48A1-207ENST00000549243 SLC12A5Q9H2X9 1139 aa27.64■■■□□ 2.02
SLC48A1-207ENST00000549243 CRB1P82279 1406 aa27.64■■■□□ 2.02
SLC48A1-207ENST00000549243 PDE3BQ13370 1112 aa27.63■■■□□ 2.01
SLC48A1-207ENST00000549243 KCNH5Q8NCM2 988 aa27.63■■■□□ 2.01
SLC48A1-207ENST00000549243 PARP4Q9UKK3 1724 aaKnown RBP27.62■■■□□ 2.01
SLC48A1-207ENST00000549243 ST20-MTHFSA0A0A6YYL1 179 aa27.62■■■□□ 2.01
SLC48A1-207ENST00000549243 AXIN2Q9Y2T1 843 aa27.62■■■□□ 2.01
SLC48A1-207ENST00000549243 EN1Q05925 392 aaPredicted RBP27.61■■■□□ 2.01
SLC48A1-207ENST00000549243 FAM196AQ6ZSG2 479 aa27.61■■■□□ 2.01
SLC48A1-207ENST00000549243 ARHGEF25Q86VW2 580 aa27.61■■■□□ 2.01
SLC48A1-207ENST00000549243 THRAP3Q9Y2W1 955 aaKnown RBP27.61■■■□□ 2.01
SLC48A1-207ENST00000549243 NFAT5O94916 1531 aa27.61■■■□□ 2.01
SLC48A1-207ENST00000549243 TRIM37O94972 964 aa27.6■■■□□ 2.01
SLC48A1-207ENST00000549243 TOM1L2Q6ZVM7 507 aa27.6■■■□□ 2.01
SLC48A1-207ENST00000549243 HDGFL2Q7Z4V5 671 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms