RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 UACAQ9BZF9 1416 aa9.49□□□□□ -0.89
EFCAB2-215ENST00000549220 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
EFCAB2-215ENST00000549220 SULF1Q8IWU6 871 aa9.49□□□□□ -0.89
EFCAB2-215ENST00000549220 CCDC102AQ96A19 550 aa9.49□□□□□ -0.89
EFCAB2-215ENST00000549220 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
EFCAB2-215ENST00000549220 ABCA8O94911 1581 aa9.49□□□□□ -0.89
EFCAB2-215ENST00000549220 PRDM9Q9NQV7 894 aa9.48□□□□□ -0.89
EFCAB2-215ENST00000549220 LOC105371045A0A1W2PR82 267 aa9.47□□□□□ -0.89
EFCAB2-215ENST00000549220 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
EFCAB2-215ENST00000549220 HLA-CQ95604 372 aa9.46□□□□□ -0.9
EFCAB2-215ENST00000549220 ATP1B4Q9UN42 357 aaPredicted RBP9.46□□□□□ -0.9
EFCAB2-215ENST00000549220 ARHGAP35Q9NRY4 1499 aa9.46□□□□□ -0.9
EFCAB2-215ENST00000549220 DIP2BQ9P265 1576 aa9.46□□□□□ -0.9
EFCAB2-215ENST00000549220 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
EFCAB2-215ENST00000549220 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
EFCAB2-215ENST00000549220 UHRF1BP1LA0JNW5 1464 aa9.45□□□□□ -0.9
EFCAB2-215ENST00000549220 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
EFCAB2-215ENST00000549220 MSS51Q4VC12 460 aa9.44□□□□□ -0.9
EFCAB2-215ENST00000549220 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
EFCAB2-215ENST00000549220 PCF11O94913 1555 aaKnown RBP9.44□□□□□ -0.9
EFCAB2-215ENST00000549220 HECW1Q76N89 1606 aa9.44□□□□□ -0.9
EFCAB2-215ENST00000549220 CLIP1P30622 1438 aa9.43□□□□□ -0.9
EFCAB2-215ENST00000549220 FMNL1O95466 1100 aaPredicted RBP9.43□□□□□ -0.9
EFCAB2-215ENST00000549220 KDM5BQ9UGL1 1544 aa9.42□□□□□ -0.9
EFCAB2-215ENST00000549220 ASXL2Q76L83 1435 aa9.42□□□□□ -0.9
EFCAB2-215ENST00000549220 MMP16P51512 607 aa9.42□□□□□ -0.9
EFCAB2-215ENST00000549220 MYT1Q01538 1121 aa9.42□□□□□ -0.9
EFCAB2-215ENST00000549220 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
EFCAB2-215ENST00000549220 CDK13Q14004 1512 aaKnown RBP9.41□□□□□ -0.9
EFCAB2-215ENST00000549220 KDM4AO75164 1064 aa9.41□□□□□ -0.9
EFCAB2-215ENST00000549220 ZMYND10O75800 440 aa9.41□□□□□ -0.9
EFCAB2-215ENST00000549220 RPIAP49247 311 aa9.41□□□□□ -0.9
EFCAB2-215ENST00000549220 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
EFCAB2-215ENST00000549220 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
EFCAB2-215ENST00000549220 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
EFCAB2-215ENST00000549220 LMOD2Q6P5Q4 547 aa9.4□□□□□ -0.9
EFCAB2-215ENST00000549220 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.91
EFCAB2-215ENST00000549220 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 TNFRSF10AO00220 468 aa9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 HOXA2O43364 376 aa9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 GPCPD1Q9NPB8 672 aa9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 ABCC10Q5T3U5 1492 aa9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
EFCAB2-215ENST00000549220 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
EFCAB2-215ENST00000549220 DGAT1O75907 488 aa9.38□□□□□ -0.91
EFCAB2-215ENST00000549220 TOR4AQ9NXH8 423 aa9.38□□□□□ -0.91
EFCAB2-215ENST00000549220 ATP10BO94823 1461 aa9.38□□□□□ -0.91
EFCAB2-215ENST00000549220 WDR7Q9Y4E6 1490 aa9.38□□□□□ -0.91
EFCAB2-215ENST00000549220 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
EFCAB2-215ENST00000549220 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
EFCAB2-215ENST00000549220 ZC3H15Q8WU90 426 aaKnown RBP9.37□□□□□ -0.91
EFCAB2-215ENST00000549220 EPRSP07814 1512 aaKnown RBP9.36□□□□□ -0.91
EFCAB2-215ENST00000549220 POTECB2RU33 542 aa9.36□□□□□ -0.91
EFCAB2-215ENST00000549220 MYO5CQ9NQX4 1742 aa9.36□□□□□ -0.91
EFCAB2-215ENST00000549220 GLI2P10070 1586 aa9.35□□□□□ -0.91
EFCAB2-215ENST00000549220 CLCN1P35523 988 aa9.35□□□□□ -0.91
EFCAB2-215ENST00000549220 USP46P62068 366 aa9.35□□□□□ -0.91
EFCAB2-215ENST00000549220 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
EFCAB2-215ENST00000549220 KIF14Q15058 1648 aa9.34□□□□□ -0.91
EFCAB2-215ENST00000549220 AMHR2Q16671 573 aa9.34□□□□□ -0.91
EFCAB2-215ENST00000549220 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
EFCAB2-215ENST00000549220 KDM6BO15054 1643 aa9.34□□□□□ -0.91
EFCAB2-215ENST00000549220 TTC37Q6PGP7 1564 aa9.33□□□□□ -0.92
EFCAB2-215ENST00000549220 TULP1O00294 542 aaPredicted RBP9.33□□□□□ -0.92
EFCAB2-215ENST00000549220 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
EFCAB2-215ENST00000549220 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
EFCAB2-215ENST00000549220 ABCA9Q8IUA7 1624 aa9.33□□□□□ -0.92
EFCAB2-215ENST00000549220 FYCO1Q9BQS8 1478 aa9.33□□□□□ -0.92
EFCAB2-215ENST00000549220 AVPP01185 164 aa9.32□□□□□ -0.92
EFCAB2-215ENST00000549220 Q3C1V9 767 aa9.32□□□□□ -0.92
EFCAB2-215ENST00000549220 CASKIN1Q8WXD9 1431 aa9.31□□□□□ -0.92
EFCAB2-215ENST00000549220 AAASQ9NRG9 546 aa9.31□□□□□ -0.92
EFCAB2-215ENST00000549220 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
EFCAB2-215ENST00000549220 CCDC18Q5T9S5 1454 aa9.3□□□□□ -0.92
EFCAB2-215ENST00000549220 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
EFCAB2-215ENST00000549220 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
EFCAB2-215ENST00000549220 CRIPAKQ8N1N5 446 aa9.3□□□□□ -0.92
EFCAB2-215ENST00000549220 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
EFCAB2-215ENST00000549220 CDC42BPBQ9Y5S2 1711 aa9.3□□□□□ -0.92
EFCAB2-215ENST00000549220 FAM187AA6NFU0 413 aa9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 FOXC1Q12948 553 aa9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 ZNF787Q6DD87 383 aa9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 CD109Q6YHK3 1445 aa9.29□□□□□ -0.92
EFCAB2-215ENST00000549220 ST8SIA5O15466 376 aa9.28□□□□□ -0.92
EFCAB2-215ENST00000549220 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
EFCAB2-215ENST00000549220 SKOR1P84550 965 aa9.28□□□□□ -0.92
EFCAB2-215ENST00000549220 TRIM32Q13049 653 aa9.28□□□□□ -0.92
EFCAB2-215ENST00000549220 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
EFCAB2-215ENST00000549220 TEX14Q8IWB6 1497 aa9.28□□□□□ -0.92
EFCAB2-215ENST00000549220 WNT7AO00755 349 aa9.27□□□□□ -0.93
EFCAB2-215ENST00000549220 CFAP74Q9C0B2 1584 aa9.27□□□□□ -0.93
EFCAB2-215ENST00000549220 SUPT6HQ7KZ85 1726 aaKnown RBP9.26□□□□□ -0.93
EFCAB2-215ENST00000549220 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
EFCAB2-215ENST00000549220 VPS8Q8N3P4 1428 aa9.26□□□□□ -0.93
EFCAB2-215ENST00000549220 PTCRAQ6ISU1 281 aaPredicted RBP9.26□□□□□ -0.93
EFCAB2-215ENST00000549220 ZNF775Q96BV0 537 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms