RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 GGT6Q6P531 493 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 SIGLEC1Q9BZZ2 1709 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 MCM4P33991 863 aa12.48□□□□□ -0.41
SMARCD1-205ENST00000548573 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
SMARCD1-205ENST00000548573 FSD2A1L4K1 749 aa12.46□□□□□ -0.41
SMARCD1-205ENST00000548573 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
SMARCD1-205ENST00000548573 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
SMARCD1-205ENST00000548573 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
SMARCD1-205ENST00000548573 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
SMARCD1-205ENST00000548573 ARHGAP31Q2M1Z3 1444 aa12.46□□□□□ -0.42
SMARCD1-205ENST00000548573 CLTCQ00610 1675 aaKnown RBP12.46□□□□□ -0.42
SMARCD1-205ENST00000548573 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.42
SMARCD1-205ENST00000548573 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
SMARCD1-205ENST00000548573 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
SMARCD1-205ENST00000548573 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
SMARCD1-205ENST00000548573 GOLGA6L3A6NEY3 463 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 RBM25P49756 843 aaKnown RBP12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 HSCBQ8IWL3 235 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 TERF2IPQ9NYB0 399 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 CDC42BPGQ6DT37 1551 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 FYB1O15117 783 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 RIPK4P57078 832 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 NUCB1Q02818 461 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 SNX21Q969T3 373 aa12.44□□□□□ -0.42
SMARCD1-205ENST00000548573 PTPRMP28827 1452 aa12.43□□□□□ -0.42
SMARCD1-205ENST00000548573 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
SMARCD1-205ENST00000548573 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
SMARCD1-205ENST00000548573 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
SMARCD1-205ENST00000548573 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
SMARCD1-205ENST00000548573 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 DIAPH1O60610 1272 aaKnown RBP12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 TRAK2O60296 914 aa12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
SMARCD1-205ENST00000548573 DDIT3P35638 169 aa12.41□□□□□ -0.42
SMARCD1-205ENST00000548573 CHMP4BQ9H444 224 aaKnown RBP12.41□□□□□ -0.42
SMARCD1-205ENST00000548573 ISY1Q9ULR0 285 aaKnown RBP12.41□□□□□ -0.42
SMARCD1-205ENST00000548573 FCHSD2O94868 740 aa12.41□□□□□ -0.42
SMARCD1-205ENST00000548573 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMARCD1-205ENST00000548573 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
SMARCD1-205ENST00000548573 IDI1Q13907 227 aa12.4□□□□□ -0.42
SMARCD1-205ENST00000548573 SAFB2Q14151 953 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMARCD1-205ENST00000548573 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
SMARCD1-205ENST00000548573 RRAGDQ9NQL2 400 aaPredicted RBP12.4□□□□□ -0.42
SMARCD1-205ENST00000548573 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
SMARCD1-205ENST00000548573 KIF20BQ96Q89 1820 aa12.4□□□□□ -0.42
SMARCD1-205ENST00000548573 MRE11P49959 708 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 NEO1Q92859 1461 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
SMARCD1-205ENST00000548573 STK26Q9P289 416 aa12.38□□□□□ -0.43
SMARCD1-205ENST00000548573 YTHDC2Q9H6S0 1430 aaKnown RBP12.38□□□□□ -0.43
SMARCD1-205ENST00000548573 TMEM131LA2VDJ0 1609 aa12.38□□□□□ -0.43
SMARCD1-205ENST00000548573 REREQ9P2R6 1566 aa12.38□□□□□ -0.43
SMARCD1-205ENST00000548573 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
SMARCD1-205ENST00000548573 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
SMARCD1-205ENST00000548573 PRAM1Q96QH2 718 aa12.37□□□□□ -0.43
SMARCD1-205ENST00000548573 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
SMARCD1-205ENST00000548573 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 PTMSP20962 102 aa12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 MYO5BQ9ULV0 1848 aa12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 PREX1Q8TCU6 1659 aa12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
SMARCD1-205ENST00000548573 GBP4Q96PP9 640 aa12.35□□□□□ -0.43
SMARCD1-205ENST00000548573 VAMP4O75379 141 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 KIF2CQ99661 725 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 ATP7BP35670 1465 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 CLCN1P35523 988 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 SKOR2Q2VWA4 1001 aaPredicted RBP12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
SMARCD1-205ENST00000548573 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms