RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 SIRT1Q96EB6 747 aa7.13□□□□□ -1.27
APP-217ENST00000548570 PRAM1Q96QH2 718 aa7.13□□□□□ -1.27
APP-217ENST00000548570 FBXO3Q9UK99 471 aa7.13□□□□□ -1.27
APP-217ENST00000548570 PTCH1Q13635 1447 aa7.12□□□□□ -1.27
APP-217ENST00000548570 USP47Q96K76 1375 aa7.12□□□□□ -1.27
APP-217ENST00000548570 ST20-MTHFSA0A0A6YYL1 179 aa7.12□□□□□ -1.27
APP-217ENST00000548570 C11orf95C9JLR9 678 aaPredicted RBP7.12□□□□□ -1.27
APP-217ENST00000548570 HSPA5P11021 654 aaKnown RBP7.12□□□□□ -1.27
APP-217ENST00000548570 ZEB1P37275 1124 aaPredicted RBP7.12□□□□□ -1.27
APP-217ENST00000548570 HIRIP3Q9BW71 556 aaPredicted RBP7.12□□□□□ -1.27
APP-217ENST00000548570 XRN1Q8IZH2 1706 aaKnown RBP7.12□□□□□ -1.27
APP-217ENST00000548570 LRRC7Q96NW7 1537 aa7.11□□□□□ -1.27
APP-217ENST00000548570 DLC1Q96QB1 1528 aa7.11□□□□□ -1.27
APP-217ENST00000548570 FAM135BQ49AJ0 1406 aa7.11□□□□□ -1.27
APP-217ENST00000548570 TMEM94Q12767 1356 aa7.11□□□□□ -1.27
APP-217ENST00000548570 POLR1AO95602 1720 aaPredicted RBP7.11□□□□□ -1.27
APP-217ENST00000548570 C3orf67Q6ZVT6 689 aa7.11□□□□□ -1.27
APP-217ENST00000548570 CPS1P31327 1500 aa7.11□□□□□ -1.27
APP-217ENST00000548570 STRCP1A6NGW2 1772 aa7.1□□□□□ -1.27
APP-217ENST00000548570 KIAA1210Q9ULL0 1709 aa7.1□□□□□ -1.27
APP-217ENST00000548570 PYGBP11216 843 aa7.1□□□□□ -1.27
APP-217ENST00000548570 SAFB2Q14151 953 aaKnown RBP eCLIP7.1□□□□□ -1.27
APP-217ENST00000548570 NKTRP30414 1462 aaKnown RBP7.1□□□□□ -1.27
APP-217ENST00000548570 LAMC1P11047 1609 aa7.09□□□□□ -1.27
APP-217ENST00000548570 CENPJQ9HC77 1338 aaPredicted RBP7.09□□□□□ -1.27
APP-217ENST00000548570 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
APP-217ENST00000548570 L3MBTL3Q96JM7 780 aaPredicted RBP7.09□□□□□ -1.27
APP-217ENST00000548570 DISP3Q9P2K9 1392 aa7.08□□□□□ -1.28
APP-217ENST00000548570 SBNO2Q9Y2G9 1366 aa7.08□□□□□ -1.28
APP-217ENST00000548570 PRR36Q9H6K5 1346 aa7.08□□□□□ -1.28
APP-217ENST00000548570 MKRN3Q13064 507 aaKnown RBP7.08□□□□□ -1.28
APP-217ENST00000548570 ZNF467Q7Z7K2 595 aaPredicted RBP7.08□□□□□ -1.28
APP-217ENST00000548570 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.07□□□□□ -1.28
APP-217ENST00000548570 TULP4Q9NRJ4 1543 aa7.07□□□□□ -1.28
APP-217ENST00000548570 MINK1Q8N4C8 1332 aaPredicted RBP7.07□□□□□ -1.28
APP-217ENST00000548570 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
APP-217ENST00000548570 FKBP8Q14318 412 aa7.07□□□□□ -1.28
APP-217ENST00000548570 GSE1Q14687 1217 aa7.07□□□□□ -1.28
APP-217ENST00000548570 POGKQ9P215 609 aa7.07□□□□□ -1.28
APP-217ENST00000548570 ADGRL3Q9HAR2 1447 aa7.07□□□□□ -1.28
APP-217ENST00000548570 NCOA3Q9Y6Q9 1424 aa7.07□□□□□ -1.28
APP-217ENST00000548570 CHD2O14647 1828 aaKnown RBP7.06□□□□□ -1.28
APP-217ENST00000548570 WASLO00401 505 aaPredicted RBP7.06□□□□□ -1.28
APP-217ENST00000548570 MMRN1Q13201 1228 aa7.06□□□□□ -1.28
APP-217ENST00000548570 CDK19Q9BWU1 502 aa7.06□□□□□ -1.28
APP-217ENST00000548570 C19orf44Q9H6X5 657 aa7.06□□□□□ -1.28
APP-217ENST00000548570 RTN4Q9NQC3 1192 aaKnown RBP7.06□□□□□ -1.28
APP-217ENST00000548570 KNDC1Q76NI1 1749 aa7.06□□□□□ -1.28
APP-217ENST00000548570 ARHGEF28Q8N1W1 1705 aaKnown RBP7.05□□□□□ -1.28
APP-217ENST00000548570 SPNS2Q8IVW8 549 aa7.05□□□□□ -1.28
APP-217ENST00000548570 CERKQ8TCT0 537 aa7.05□□□□□ -1.28
APP-217ENST00000548570 CABP2Q9NPB3 220 aa7.05□□□□□ -1.28
APP-217ENST00000548570 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
APP-217ENST00000548570 EIF3AQ14152 1382 aaKnown RBP7.05□□□□□ -1.28
APP-217ENST00000548570 KIF7Q2M1P5 1343 aa7.04□□□□□ -1.28
APP-217ENST00000548570 WASHC2AQ641Q2 1341 aa7.04□□□□□ -1.28
APP-217ENST00000548570 ADGRB2O60241 1585 aa7.04□□□□□ -1.28
APP-217ENST00000548570 MST1RQ04912 1400 aa7.04□□□□□ -1.28
APP-217ENST00000548570 EMP3P54852 163 aa7.04□□□□□ -1.28
APP-217ENST00000548570 KLHL34Q8N239 644 aa7.04□□□□□ -1.28
APP-217ENST00000548570 MARVELD3Q96A59 401 aa7.04□□□□□ -1.28
APP-217ENST00000548570 ATP7BP35670 1465 aa7.04□□□□□ -1.28
APP-217ENST00000548570 NUTM2FA1L443 756 aa7.03□□□□□ -1.28
APP-217ENST00000548570 G3V3G9 751 aa7.03□□□□□ -1.28
APP-217ENST00000548570 ORAI2Q96SN7 254 aa7.03□□□□□ -1.28
APP-217ENST00000548570 C1orf167Q5SNV9 1468 aa7.03□□□□□ -1.28
APP-217ENST00000548570 DCCP43146 1447 aa7.02□□□□□ -1.29
APP-217ENST00000548570 NALCNQ8IZF0 1738 aa7.02□□□□□ -1.29
APP-217ENST00000548570 NUDT16Q96DE0 195 aaKnown RBP7.02□□□□□ -1.29
APP-217ENST00000548570 PUS7Q96PZ0 661 aaKnown RBP7.02□□□□□ -1.29
APP-217ENST00000548570 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
APP-217ENST00000548570 CCDC7Q96M83 1385 aa7.02□□□□□ -1.29
APP-217ENST00000548570 CD163L1Q9NR16 1453 aa7.02□□□□□ -1.29
APP-217ENST00000548570 CDC42BPGQ6DT37 1551 aa7.02□□□□□ -1.29
APP-217ENST00000548570 EVC2Q86UK5 1308 aa7.01□□□□□ -1.29
APP-217ENST00000548570 USP32Q8NFA0 1604 aa7.01□□□□□ -1.29
APP-217ENST00000548570 MSH6P52701 1360 aa7.01□□□□□ -1.29
APP-217ENST00000548570 PLEKHG3A1L390 1219 aa7.01□□□□□ -1.29
APP-217ENST00000548570 TMF1P82094 1093 aa7.01□□□□□ -1.29
APP-217ENST00000548570 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
APP-217ENST00000548570 C14orf37Q86TY3 774 aa7.01□□□□□ -1.29
APP-217ENST00000548570 DDX17Q92841 729 aaKnown RBP7.01□□□□□ -1.29
APP-217ENST00000548570 CABP1Q9NZU7 370 aa7.01□□□□□ -1.29
APP-217ENST00000548570 SLAIN2Q9P270 581 aa7.01□□□□□ -1.29
APP-217ENST00000548570 XIRP1Q702N8 1843 aaKnown RBP7.01□□□□□ -1.29
APP-217ENST00000548570 ATF3P18847 181 aa7□□□□□ -1.29
APP-217ENST00000548570 SRPK2P78362 688 aaKnown RBP7□□□□□ -1.29
APP-217ENST00000548570 CADPS2Q86UW7 1296 aa7□□□□□ -1.29
APP-217ENST00000548570 CARD14Q9BXL6 1004 aa7□□□□□ -1.29
APP-217ENST00000548570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7□□□□□ -1.297e-10■■□□□ 12.1
APP-217ENST00000548570 CPSF1Q10570 1443 aaKnown RBP7□□□□□ -1.29
APP-217ENST00000548570 ANKARQ7Z5J8 1434 aa7□□□□□ -1.29
APP-217ENST00000548570 QRICH2Q9H0J4 1663 aa7□□□□□ -1.29
APP-217ENST00000548570 IQSEC2Q5JU85 1478 aa6.99□□□□□ -1.29
APP-217ENST00000548570 ZNF316A6NFI3 1004 aaPredicted RBP6.99□□□□□ -1.29
APP-217ENST00000548570 PMFBP1Q8TBY8 1022 aa6.99□□□□□ -1.29
APP-217ENST00000548570 SSH2Q76I76 1423 aa6.99□□□□□ -1.29
APP-217ENST00000548570 POLR3AO14802 1390 aaPredicted RBP6.98□□□□□ -1.29
APP-217ENST00000548570 ATAD2Q6PL18 1390 aa6.98□□□□□ -1.29
APP-217ENST00000548570 PER1O15534 1290 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms