RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
TRAFD1-205ENST00000548277 NUTM2GQ5VZR2 741 aa17.53■□□□□ 0.4
TRAFD1-205ENST00000548277 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
TRAFD1-205ENST00000548277 ADGRB2O60241 1585 aa17.53■□□□□ 0.4
TRAFD1-205ENST00000548277 SRCAPQ6ZRS2 3230 aa17.53■□□□□ 0.4
TRAFD1-205ENST00000548277 BAG6P46379 1132 aa17.51■□□□□ 0.39
TRAFD1-205ENST00000548277 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
TRAFD1-205ENST00000548277 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
TRAFD1-205ENST00000548277 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
TRAFD1-205ENST00000548277 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
TRAFD1-205ENST00000548277 STRN4Q9NRL3 753 aa17.5■□□□□ 0.39
TRAFD1-205ENST00000548277 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
TRAFD1-205ENST00000548277 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
TRAFD1-205ENST00000548277 ARHGEF28Q8N1W1 1705 aaKnown RBP17.49■□□□□ 0.39
TRAFD1-205ENST00000548277 CRYBG1Q9Y4K1 1723 aa17.49■□□□□ 0.39
TRAFD1-205ENST00000548277 SPATA31A5Q5VU36 1347 aa17.48■□□□□ 0.39
TRAFD1-205ENST00000548277 SPATA31A7Q8IWB4 1347 aa17.48■□□□□ 0.39
TRAFD1-205ENST00000548277 EIF3AQ14152 1382 aaKnown RBP17.48■□□□□ 0.39
TRAFD1-205ENST00000548277 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
TRAFD1-205ENST00000548277 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
TRAFD1-205ENST00000548277 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
TRAFD1-205ENST00000548277 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
TRAFD1-205ENST00000548277 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
TRAFD1-205ENST00000548277 EVA1CP58658 441 aa17.44■□□□□ 0.38
TRAFD1-205ENST00000548277 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
TRAFD1-205ENST00000548277 TRIM37O94972 964 aa17.43■□□□□ 0.38
TRAFD1-205ENST00000548277 HRCP23327 699 aa17.43■□□□□ 0.38
TRAFD1-205ENST00000548277 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
TRAFD1-205ENST00000548277 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
TRAFD1-205ENST00000548277 ACEP12821 1306 aa17.42■□□□□ 0.38
TRAFD1-205ENST00000548277 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
TRAFD1-205ENST00000548277 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
TRAFD1-205ENST00000548277 ATP7BP35670 1465 aa17.41■□□□□ 0.38
TRAFD1-205ENST00000548277 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
TRAFD1-205ENST00000548277 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
TRAFD1-205ENST00000548277 ZBTB7CA1YPR0 619 aa17.4■□□□□ 0.38
TRAFD1-205ENST00000548277 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
TRAFD1-205ENST00000548277 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
TRAFD1-205ENST00000548277 LRP5O75197 1615 aa17.39■□□□□ 0.38
TRAFD1-205ENST00000548277 APBA3O96018 575 aa17.39■□□□□ 0.37
TRAFD1-205ENST00000548277 NBPF1Q3BBV0 1214 aa17.39■□□□□ 0.37
TRAFD1-205ENST00000548277 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
TRAFD1-205ENST00000548277 SRPK2P78362 688 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-205ENST00000548277 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
TRAFD1-205ENST00000548277 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-205ENST00000548277 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
TRAFD1-205ENST00000548277 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
TRAFD1-205ENST00000548277 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
TRAFD1-205ENST00000548277 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
TRAFD1-205ENST00000548277 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
TRAFD1-205ENST00000548277 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
TRAFD1-205ENST00000548277 SSH2Q76I76 1423 aa17.33■□□□□ 0.36
TRAFD1-205ENST00000548277 POLR3AO14802 1390 aaPredicted RBP17.33■□□□□ 0.36
TRAFD1-205ENST00000548277 KIAA1210Q9ULL0 1709 aa17.33■□□□□ 0.36
TRAFD1-205ENST00000548277 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
TRAFD1-205ENST00000548277 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
TRAFD1-205ENST00000548277 GCP02774 474 aa17.31■□□□□ 0.36
TRAFD1-205ENST00000548277 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
TRAFD1-205ENST00000548277 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
TRAFD1-205ENST00000548277 BARGINQ6ZT62 677 aa17.3■□□□□ 0.36
TRAFD1-205ENST00000548277 DISP2A7MBM2 1401 aa17.29■□□□□ 0.36
TRAFD1-205ENST00000548277 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
TRAFD1-205ENST00000548277 NLRP6P59044 892 aa17.28■□□□□ 0.36
TRAFD1-205ENST00000548277 CABP1Q9NZU7 370 aa17.28■□□□□ 0.36
TRAFD1-205ENST00000548277 QRICH2Q9H0J4 1663 aa17.28■□□□□ 0.36
TRAFD1-205ENST00000548277 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
TRAFD1-205ENST00000548277 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
TRAFD1-205ENST00000548277 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
TRAFD1-205ENST00000548277 NUP188Q5SRE5 1749 aa17.26■□□□□ 0.35
TRAFD1-205ENST00000548277 RREB1Q92766 1687 aa17.26■□□□□ 0.35
TRAFD1-205ENST00000548277 USP19O94966 1318 aa17.25■□□□□ 0.35
TRAFD1-205ENST00000548277 SOX12O15370 315 aa17.25■□□□□ 0.35
TRAFD1-205ENST00000548277 SBF2Q86WG5 1849 aa17.25■□□□□ 0.35
TRAFD1-205ENST00000548277 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
TRAFD1-205ENST00000548277 THRAP3Q9Y2W1 955 aaKnown RBP17.24■□□□□ 0.35
TRAFD1-205ENST00000548277 CPDO75976 1380 aa17.24■□□□□ 0.35
TRAFD1-205ENST00000548277 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
TRAFD1-205ENST00000548277 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
TRAFD1-205ENST00000548277 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
TRAFD1-205ENST00000548277 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
TRAFD1-205ENST00000548277 L3MBTL2Q969R5 705 aa17.21■□□□□ 0.35
TRAFD1-205ENST00000548277 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
TRAFD1-205ENST00000548277 CRB1P82279 1406 aa17.21■□□□□ 0.34
TRAFD1-205ENST00000548277 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
TRAFD1-205ENST00000548277 PTF1AQ7RTS3 328 aa17.2■□□□□ 0.34
TRAFD1-205ENST00000548277 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
TRAFD1-205ENST00000548277 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
TRAFD1-205ENST00000548277 USP6P35125 1406 aa17.2■□□□□ 0.34
TRAFD1-205ENST00000548277 DDB1Q16531 1140 aa17.19■□□□□ 0.34
TRAFD1-205ENST00000548277 COL18A1P39060 1754 aa17.19■□□□□ 0.34
TRAFD1-205ENST00000548277 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
TRAFD1-205ENST00000548277 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
TRAFD1-205ENST00000548277 AKAP12Q02952 1782 aa17.17■□□□□ 0.34
TRAFD1-205ENST00000548277 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
TRAFD1-205ENST00000548277 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
TRAFD1-205ENST00000548277 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
TRAFD1-205ENST00000548277 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
TRAFD1-205ENST00000548277 WNK3Q9BYP7 1800 aa17.16■□□□□ 0.34
TRAFD1-205ENST00000548277 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
TRAFD1-205ENST00000548277 OVOS2A0A0G2JMS6 1433 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms