RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 PAK3O75914 559 aaPredicted RBP21.49■■□□□ 1.03
RNF41-205ENST00000548225 CRYBG1Q9Y4K1 1723 aa21.47■■□□□ 1.03
RNF41-205ENST00000548225 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
RNF41-205ENST00000548225 USP21Q9UK80 565 aa21.47■■□□□ 1.03
RNF41-205ENST00000548225 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.46■■□□□ 1.03
RNF41-205ENST00000548225 CDK12Q9NYV4 1490 aaPredicted RBP21.46■■□□□ 1.03
RNF41-205ENST00000548225 RXRBP28702 533 aa21.46■■□□□ 1.03
RNF41-205ENST00000548225 CABLES1Q8TDN4 633 aa21.46■■□□□ 1.03
RNF41-205ENST00000548225 USP6P35125 1406 aa21.45■■□□□ 1.02
RNF41-205ENST00000548225 SLIT2O94813 1529 aa21.45■■□□□ 1.02
RNF41-205ENST00000548225 PUS7Q96PZ0 661 aaKnown RBP21.44■■□□□ 1.02
RNF41-205ENST00000548225 QTRT2Q9H974 415 aaKnown RBP21.44■■□□□ 1.02
RNF41-205ENST00000548225 TRPC5Q9UL62 973 aaPredicted RBP21.44■■□□□ 1.02
RNF41-205ENST00000548225 USP47Q96K76 1375 aa21.44■■□□□ 1.02
RNF41-205ENST00000548225 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
RNF41-205ENST00000548225 NWD2Q9ULI1 1742 aa21.43■■□□□ 1.02
RNF41-205ENST00000548225 ST20-MTHFSA0A0A6YYL1 179 aa21.43■■□□□ 1.02
RNF41-205ENST00000548225 ATRNO75882 1429 aa21.43■■□□□ 1.02
RNF41-205ENST00000548225 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
RNF41-205ENST00000548225 RBM6P78332 1123 aaKnown RBP21.42■■□□□ 1.02
RNF41-205ENST00000548225 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
RNF41-205ENST00000548225 PHRF1Q9P1Y6 1649 aaKnown RBP21.42■■□□□ 1.02
RNF41-205ENST00000548225 PLCH1Q4KWH8 1693 aa21.41■■□□□ 1.02
RNF41-205ENST00000548225 TESK2Q96S53 571 aa21.41■■□□□ 1.02
RNF41-205ENST00000548225 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
RNF41-205ENST00000548225 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
RNF41-205ENST00000548225 CPSF1Q10570 1443 aaKnown RBP21.39■■□□□ 1.02
RNF41-205ENST00000548225 SSH2Q76I76 1423 aa21.39■■□□□ 1.02
RNF41-205ENST00000548225 UNC5CLQ8IV45 518 aa21.39■■□□□ 1.01
RNF41-205ENST00000548225 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
RNF41-205ENST00000548225 MON2Q7Z3U7 1717 aa21.38■■□□□ 1.01
RNF41-205ENST00000548225 NINLQ9Y2I6 1382 aa21.37■■□□□ 1.01
RNF41-205ENST00000548225 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
RNF41-205ENST00000548225 USP19O94966 1318 aa21.36■■□□□ 1.01
RNF41-205ENST00000548225 NLRP13Q86W25 1043 aa21.36■■□□□ 1.01
RNF41-205ENST00000548225 FAM83GA6ND36 823 aa21.35■■□□□ 1.01
RNF41-205ENST00000548225 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
RNF41-205ENST00000548225 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
RNF41-205ENST00000548225 TTC21AQ8NDW8 1320 aa21.34■■□□□ 1.01
RNF41-205ENST00000548225 NUTM2GQ5VZR2 741 aa21.34■■□□□ 1.01
RNF41-205ENST00000548225 RGS12O14924 1447 aa21.34■■□□□ 1.01
RNF41-205ENST00000548225 NRAPQ86VF7 1730 aa21.34■■□□□ 1.01
RNF41-205ENST00000548225 TMF1P82094 1093 aa21.33■■□□□ 1.01
RNF41-205ENST00000548225 PRDM11Q9NQV5 511 aa21.33■■□□□ 1.01
RNF41-205ENST00000548225 CD163L1Q9NR16 1453 aa21.32■■□□□ 1
RNF41-205ENST00000548225 TTC21BQ7Z4L5 1316 aa21.32■■□□□ 1
RNF41-205ENST00000548225 TMC1Q8TDI8 760 aa21.32■■□□□ 1
RNF41-205ENST00000548225 GJD4Q96KN9 370 aaPredicted RBP21.32■■□□□ 1
RNF41-205ENST00000548225 CPDO75976 1380 aa21.32■■□□□ 1
RNF41-205ENST00000548225 KIAA0232Q92628 1395 aa21.32■■□□□ 1
RNF41-205ENST00000548225 SLIT3O75094 1523 aa21.31■■□□□ 1
RNF41-205ENST00000548225 VPS72Q15906 364 aa21.31■■□□□ 1
RNF41-205ENST00000548225 HDGFL2Q7Z4V5 671 aaPredicted RBP21.31■■□□□ 1
RNF41-205ENST00000548225 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
RNF41-205ENST00000548225 NLRP6P59044 892 aa21.3■■□□□ 1
RNF41-205ENST00000548225 CDCA8Q53HL2 280 aa21.3■■□□□ 1
RNF41-205ENST00000548225 GLI3P10071 1580 aa21.3■■□□□ 1
RNF41-205ENST00000548225 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
RNF41-205ENST00000548225 BTG4Q9NY30 223 aa21.29■■□□□ 1
RNF41-205ENST00000548225 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
RNF41-205ENST00000548225 GCP02774 474 aa21.28■■□□□ 1
RNF41-205ENST00000548225 USP54Q70EL1 1684 aa21.28■■□□□ 1
RNF41-205ENST00000548225 A0A1W2PP64 1363 aa21.27■■□□□ 1
RNF41-205ENST00000548225 ZC3H6P61129 1189 aaKnown RBP21.27■■□□□ 1
RNF41-205ENST00000548225 LMO7Q8WWI1 1683 aa21.25■□□□□ 0.99
RNF41-205ENST00000548225 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
RNF41-205ENST00000548225 CCDC9Q9Y3X0 531 aaKnown RBP21.24■□□□□ 0.99
RNF41-205ENST00000548225 USP31Q70CQ4 1352 aa21.23■□□□□ 0.99
RNF41-205ENST00000548225 ANKRD36BQ8N2N9 1353 aa21.23■□□□□ 0.99
RNF41-205ENST00000548225 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
RNF41-205ENST00000548225 CHRNA2Q15822 529 aa21.23■□□□□ 0.99
RNF41-205ENST00000548225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.99
RNF41-205ENST00000548225 ONECUT3O60422 494 aaPredicted RBP21.2■□□□□ 0.98
RNF41-205ENST00000548225 CAMTA1Q9Y6Y1 1673 aa21.2■□□□□ 0.98
RNF41-205ENST00000548225 SPATA31A5Q5VU36 1347 aa21.2■□□□□ 0.98
RNF41-205ENST00000548225 SPATA31A7Q8IWB4 1347 aa21.2■□□□□ 0.98
RNF41-205ENST00000548225 AATKQ6ZMQ8 1374 aa21.2■□□□□ 0.98
RNF41-205ENST00000548225 NFAT5O94916 1531 aa21.19■□□□□ 0.98
RNF41-205ENST00000548225 ABCC6O95255 1503 aa21.19■□□□□ 0.98
RNF41-205ENST00000548225 MYOM1P52179 1685 aa21.18■□□□□ 0.98
RNF41-205ENST00000548225 NME9Q86XW9 330 aa21.17■□□□□ 0.98
RNF41-205ENST00000548225 COL5A2P05997 1499 aaPredicted RBP21.17■□□□□ 0.98
RNF41-205ENST00000548225 COL18A1P39060 1754 aa21.16■□□□□ 0.98
RNF41-205ENST00000548225 OVOS2A0A0J9YW53 1432 aa21.16■□□□□ 0.98
RNF41-205ENST00000548225 OVOS2Q6IE36 1432 aa21.16■□□□□ 0.98
RNF41-205ENST00000548225 EVA1CP58658 441 aa21.16■□□□□ 0.98
RNF41-205ENST00000548225 STRN4Q9NRL3 753 aa21.16■□□□□ 0.98
RNF41-205ENST00000548225 SPATA31A1Q5TZJ5 1347 aa21.15■□□□□ 0.98
RNF41-205ENST00000548225 HSPA5P11021 654 aaKnown RBP21.15■□□□□ 0.98
RNF41-205ENST00000548225 ARHGEF25Q86VW2 580 aa21.15■□□□□ 0.98
RNF41-205ENST00000548225 SEPT12Q8IYM1 358 aa21.15■□□□□ 0.98
RNF41-205ENST00000548225 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
RNF41-205ENST00000548225 BRWD3Q6RI45 1802 aa21.14■□□□□ 0.97
RNF41-205ENST00000548225 THSD7AQ9UPZ6 1657 aa21.13■□□□□ 0.97
RNF41-205ENST00000548225 FAM98CQ17RN3 349 aaKnown RBP21.13■□□□□ 0.97
RNF41-205ENST00000548225 ZRANB1Q9UGI0 708 aa21.13■□□□□ 0.97
RNF41-205ENST00000548225 ZBTB7CA1YPR0 619 aa21.12■□□□□ 0.97
RNF41-205ENST00000548225 SOX12O15370 315 aa21.11■□□□□ 0.97
RNF41-205ENST00000548225 LARP1Q6PKG0 1096 aaKnown RBP21.1■□□□□ 0.97
RNF41-205ENST00000548225 CRB1P82279 1406 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms