RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 GPRASP1Q5JY77 1395 aa18.09■□□□□ 0.49
GCN1-204ENST00000548132 PSME1Q06323 249 aa18.09■□□□□ 0.49
GCN1-204ENST00000548132 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
GCN1-204ENST00000548132 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
GCN1-204ENST00000548132 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
GCN1-204ENST00000548132 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
GCN1-204ENST00000548132 USP54Q70EL1 1684 aa18.08■□□□□ 0.48
GCN1-204ENST00000548132 PPIP5K1Q6PFW1 1433 aa18.07■□□□□ 0.48
GCN1-204ENST00000548132 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
GCN1-204ENST00000548132 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
GCN1-204ENST00000548132 SLIT3O75094 1523 aa18.07■□□□□ 0.48
GCN1-204ENST00000548132 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
GCN1-204ENST00000548132 PLEKHG5O94827 1062 aa18.05■□□□□ 0.48
GCN1-204ENST00000548132 COL18A1P39060 1754 aa18.04■□□□□ 0.48
GCN1-204ENST00000548132 ACEP12821 1306 aa18.03■□□□□ 0.48
GCN1-204ENST00000548132 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
GCN1-204ENST00000548132 VPS72Q15906 364 aa18.03■□□□□ 0.48
GCN1-204ENST00000548132 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
GCN1-204ENST00000548132 SSH2Q76I76 1423 aa18.03■□□□□ 0.48
GCN1-204ENST00000548132 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
GCN1-204ENST00000548132 USP19O94966 1318 aa18.02■□□□□ 0.48
GCN1-204ENST00000548132 USP6P35125 1406 aa18.02■□□□□ 0.48
GCN1-204ENST00000548132 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
GCN1-204ENST00000548132 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
GCN1-204ENST00000548132 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
GCN1-204ENST00000548132 CAMTA1Q9Y6Y1 1673 aa18.01■□□□□ 0.47
GCN1-204ENST00000548132 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
GCN1-204ENST00000548132 KIAA0232Q92628 1395 aa18.01■□□□□ 0.47
GCN1-204ENST00000548132 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
GCN1-204ENST00000548132 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
GCN1-204ENST00000548132 CCDC61Q9Y6R9 512 aa17.99■□□□□ 0.47
GCN1-204ENST00000548132 SBNO2Q9Y2G9 1366 aa17.99■□□□□ 0.47
GCN1-204ENST00000548132 RGPD5Q99666 1765 aa17.99■□□□□ 0.47
GCN1-204ENST00000548132 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
GCN1-204ENST00000548132 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
GCN1-204ENST00000548132 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
GCN1-204ENST00000548132 NFAT5O94916 1531 aa17.98■□□□□ 0.47
GCN1-204ENST00000548132 CD163L1Q9NR16 1453 aa17.97■□□□□ 0.47
GCN1-204ENST00000548132 CPDO75976 1380 aa17.96■□□□□ 0.47
GCN1-204ENST00000548132 ONECUT3O60422 494 aaPredicted RBP17.96■□□□□ 0.47
GCN1-204ENST00000548132 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
GCN1-204ENST00000548132 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
GCN1-204ENST00000548132 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
GCN1-204ENST00000548132 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
GCN1-204ENST00000548132 PEAK1Q9H792 1746 aa17.95■□□□□ 0.46
GCN1-204ENST00000548132 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
GCN1-204ENST00000548132 NUTM2GQ5VZR2 741 aa17.94■□□□□ 0.46
GCN1-204ENST00000548132 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
GCN1-204ENST00000548132 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
GCN1-204ENST00000548132 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
GCN1-204ENST00000548132 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
GCN1-204ENST00000548132 CPSF1Q10570 1443 aaKnown RBP17.93■□□□□ 0.46
GCN1-204ENST00000548132 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
GCN1-204ENST00000548132 PRDM11Q9NQV5 511 aa17.93■□□□□ 0.46
GCN1-204ENST00000548132 LTN1O94822 1766 aa17.93■□□□□ 0.46
GCN1-204ENST00000548132 RREB1Q92766 1687 aa17.93■□□□□ 0.46
GCN1-204ENST00000548132 CHRNA2Q15822 529 aa17.91■□□□□ 0.46
GCN1-204ENST00000548132 ABCC6O95255 1503 aa17.89■□□□□ 0.45
GCN1-204ENST00000548132 FAM98CQ17RN3 349 aaKnown RBP17.89■□□□□ 0.45
GCN1-204ENST00000548132 SPATA31A1Q5TZJ5 1347 aa17.89■□□□□ 0.45
GCN1-204ENST00000548132 MYOM1P52179 1685 aa17.89■□□□□ 0.45
GCN1-204ENST00000548132 SBF2Q86WG5 1849 aa17.88■□□□□ 0.45
GCN1-204ENST00000548132 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
GCN1-204ENST00000548132 NUP188Q5SRE5 1749 aa17.88■□□□□ 0.45
GCN1-204ENST00000548132 EVC2Q86UK5 1308 aa17.88■□□□□ 0.45
GCN1-204ENST00000548132 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
GCN1-204ENST00000548132 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
GCN1-204ENST00000548132 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
GCN1-204ENST00000548132 DISP2A7MBM2 1401 aa17.86■□□□□ 0.45
GCN1-204ENST00000548132 LRP5O75197 1615 aa17.86■□□□□ 0.45
GCN1-204ENST00000548132 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
GCN1-204ENST00000548132 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
GCN1-204ENST00000548132 RGPD3A6NKT7 1758 aaPredicted RBP17.84■□□□□ 0.45
GCN1-204ENST00000548132 RGPD4Q7Z3J3 1758 aa17.84■□□□□ 0.45
GCN1-204ENST00000548132 DEFB132Q7Z7B7 95 aa17.83■□□□□ 0.44
GCN1-204ENST00000548132 TTC21BQ7Z4L5 1316 aa17.82■□□□□ 0.44
GCN1-204ENST00000548132 GCP02774 474 aa17.82■□□□□ 0.44
GCN1-204ENST00000548132 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
GCN1-204ENST00000548132 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
GCN1-204ENST00000548132 CRB1P82279 1406 aa17.81■□□□□ 0.44
GCN1-204ENST00000548132 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
GCN1-204ENST00000548132 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
GCN1-204ENST00000548132 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
GCN1-204ENST00000548132 CCDC125Q86Z20 511 aa17.81■□□□□ 0.44
GCN1-204ENST00000548132 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
GCN1-204ENST00000548132 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
GCN1-204ENST00000548132 CARD11Q9BXL7 1154 aa17.8■□□□□ 0.44
GCN1-204ENST00000548132 STRN4Q9NRL3 753 aa17.8■□□□□ 0.44
GCN1-204ENST00000548132 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
GCN1-204ENST00000548132 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
GCN1-204ENST00000548132 KIF20BQ96Q89 1820 aa17.79■□□□□ 0.44
GCN1-204ENST00000548132 FAM208AQ9UK61 1670 aaKnown RBP17.79■□□□□ 0.44
GCN1-204ENST00000548132 A0A0G2JS52 829 aa17.78■□□□□ 0.44
GCN1-204ENST00000548132 MYT1Q01538 1121 aa17.78■□□□□ 0.44
GCN1-204ENST00000548132 TESK2Q96S53 571 aa17.78■□□□□ 0.44
GCN1-204ENST00000548132 USP31Q70CQ4 1352 aa17.78■□□□□ 0.44
GCN1-204ENST00000548132 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
GCN1-204ENST00000548132 BARGINQ6ZT62 677 aa17.77■□□□□ 0.44
GCN1-204ENST00000548132 EDC4Q6P2E9 1401 aaKnown RBP17.77■□□□□ 0.44
GCN1-204ENST00000548132 NLRP6P59044 892 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms