RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
RNF41-204ENST00000548120 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
RNF41-204ENST00000548120 NWD2Q9ULI1 1742 aa10.13□□□□□ -0.79
RNF41-204ENST00000548120 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
RNF41-204ENST00000548120 FAM83GA6ND36 823 aa10.12□□□□□ -0.79
RNF41-204ENST00000548120 GIGYF1O75420 1035 aaPredicted RBP10.12□□□□□ -0.79
RNF41-204ENST00000548120 KRT28Q7Z3Y7 464 aa10.12□□□□□ -0.79
RNF41-204ENST00000548120 BTG4Q9NY30 223 aa10.12□□□□□ -0.79
RNF41-204ENST00000548120 NAIPQ13075 1403 aa10.12□□□□□ -0.79
RNF41-204ENST00000548120 PRAG1Q86YV5 1406 aa10.12□□□□□ -0.79
RNF41-204ENST00000548120 NRKQ7Z2Y5 1582 aa10.11□□□□□ -0.79
RNF41-204ENST00000548120 FXR2P51116 673 aaKnown RBP eCLIP10.11□□□□□ -0.79
RNF41-204ENST00000548120 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
RNF41-204ENST00000548120 RREB1Q92766 1687 aa10.1□□□□□ -0.79
RNF41-204ENST00000548120 NUP155O75694 1391 aa10.1□□□□□ -0.79
RNF41-204ENST00000548120 NRAPQ86VF7 1730 aa10.1□□□□□ -0.79
RNF41-204ENST00000548120 THSD7AQ9UPZ6 1657 aa10.09□□□□□ -0.79
RNF41-204ENST00000548120 FAM50AQ14320 339 aaKnown RBP10.09□□□□□ -0.79
RNF41-204ENST00000548120 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
RNF41-204ENST00000548120 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
RNF41-204ENST00000548120 SPATA31A5Q5VU36 1347 aa10.08□□□□□ -0.8
RNF41-204ENST00000548120 SPATA31A7Q8IWB4 1347 aa10.08□□□□□ -0.8
RNF41-204ENST00000548120 ABCA3Q99758 1704 aa10.08□□□□□ -0.8
RNF41-204ENST00000548120 ARHGEF10O15013 1369 aa10.08□□□□□ -0.8
RNF41-204ENST00000548120 KIF1AQ12756 1690 aa10.08□□□□□ -0.8
RNF41-204ENST00000548120 ZBTB7AO95365 584 aa10.06□□□□□ -0.8
RNF41-204ENST00000548120 ZEB1P37275 1124 aaPredicted RBP10.06□□□□□ -0.8
RNF41-204ENST00000548120 PSME1Q06323 249 aa10.06□□□□□ -0.8
RNF41-204ENST00000548120 WAPLQ7Z5K2 1190 aa10.06□□□□□ -0.8
RNF41-204ENST00000548120 MYOM1P52179 1685 aa10.06□□□□□ -0.8
RNF41-204ENST00000548120 SBNO1A3KN83 1393 aa10.05□□□□□ -0.8
RNF41-204ENST00000548120 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
RNF41-204ENST00000548120 FHDC1Q9C0D6 1143 aaPredicted RBP10.05□□□□□ -0.8
RNF41-204ENST00000548120 RRBP1Q9P2E9 1410 aaKnown RBP10.05□□□□□ -0.8
RNF41-204ENST00000548120 PLEKHH1Q9ULM0 1364 aa10.04□□□□□ -0.8
RNF41-204ENST00000548120 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
RNF41-204ENST00000548120 ATXN8OSP0DMR3 200 aa10.04□□□□□ -0.8
RNF41-204ENST00000548120 PDGFDQ9GZP0 370 aaPredicted RBP10.04□□□□□ -0.8
RNF41-204ENST00000548120 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
RNF41-204ENST00000548120 STK26Q9P289 416 aa10.04□□□□□ -0.8
RNF41-204ENST00000548120 PHF8Q9UPP1 1060 aa10.04□□□□□ -0.8
RNF41-204ENST00000548120 SYT17Q9BSW7 474 aa10.03□□□□□ -0.8
RNF41-204ENST00000548120 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
RNF41-204ENST00000548120 COL14A1Q05707 1796 aaKnown RBP10.03□□□□□ -0.8
RNF41-204ENST00000548120 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
RNF41-204ENST00000548120 FMN2Q9NZ56 1722 aa10.02□□□□□ -0.8
RNF41-204ENST00000548120 ZBTB22O15209 634 aa10.02□□□□□ -0.81
RNF41-204ENST00000548120 PTGER2P43116 358 aa10.02□□□□□ -0.81
RNF41-204ENST00000548120 PDE3BQ13370 1112 aa10.02□□□□□ -0.81
RNF41-204ENST00000548120 STRN4Q9NRL3 753 aa10.02□□□□□ -0.81
RNF41-204ENST00000548120 TECPR2O15040 1411 aa10.01□□□□□ -0.81
RNF41-204ENST00000548120 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
RNF41-204ENST00000548120 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
RNF41-204ENST00000548120 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
RNF41-204ENST00000548120 PRDM11Q9NQV5 511 aa10.01□□□□□ -0.81
RNF41-204ENST00000548120 NRXN1Q9ULB1 1477 aa10.01□□□□□ -0.81
RNF41-204ENST00000548120 DLC1Q96QB1 1528 aa10□□□□□ -0.81
RNF41-204ENST00000548120 CASZ1Q86V15 1759 aa10□□□□□ -0.81
RNF41-204ENST00000548120 PMFBP1Q8TBY8 1022 aa9.99□□□□□ -0.81
RNF41-204ENST00000548120 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
RNF41-204ENST00000548120 CHRNA2Q15822 529 aa9.98□□□□□ -0.81
RNF41-204ENST00000548120 GPR162Q16538 588 aa9.98□□□□□ -0.81
RNF41-204ENST00000548120 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
RNF41-204ENST00000548120 ROCK1Q13464 1354 aa9.97□□□□□ -0.81
RNF41-204ENST00000548120 KIAA0232Q92628 1395 aa9.97□□□□□ -0.81
RNF41-204ENST00000548120 TMEM132EQ6IEE7 984 aa9.96□□□□□ -0.82
RNF41-204ENST00000548120 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
RNF41-204ENST00000548120 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
RNF41-204ENST00000548120 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
RNF41-204ENST00000548120 RPGRIP1LQ68CZ1 1315 aa9.95□□□□□ -0.82
RNF41-204ENST00000548120 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
RNF41-204ENST00000548120 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
RNF41-204ENST00000548120 OVOS2A0A0G2JMS6 1433 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 OVOS2A0A0J9YW53 1432 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 OVOS2Q6IE36 1432 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 GPRASP1Q5JY77 1395 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 HSPA6P17066 643 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
RNF41-204ENST00000548120 ARXQ96QS3 562 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 MTFR1LQ9H019 292 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 STK32BQ9NY57 414 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
RNF41-204ENST00000548120 KIF1BO60333 1816 aa9.93□□□□□ -0.82
RNF41-204ENST00000548120 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
RNF41-204ENST00000548120 PLSCR1O15162 318 aa9.93□□□□□ -0.82
RNF41-204ENST00000548120 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
RNF41-204ENST00000548120 ITGAEP38570 1179 aa9.93□□□□□ -0.82
RNF41-204ENST00000548120 SGIP1Q9BQI5 828 aa9.93□□□□□ -0.82
RNF41-204ENST00000548120 YTHDC2Q9H6S0 1430 aaKnown RBP9.92□□□□□ -0.82
RNF41-204ENST00000548120 CHD4Q14839 1912 aa9.92□□□□□ -0.82
RNF41-204ENST00000548120 EVA1CP58658 441 aa9.92□□□□□ -0.82
RNF41-204ENST00000548120 ZC3H6P61129 1189 aaKnown RBP9.92□□□□□ -0.82
RNF41-204ENST00000548120 LARP1Q6PKG0 1096 aaKnown RBP9.92□□□□□ -0.82
RNF41-204ENST00000548120 PTF1AQ7RTS3 328 aa9.92□□□□□ -0.82
RNF41-204ENST00000548120 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
RNF41-204ENST00000548120 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
RNF41-204ENST00000548120 KNDC1Q76NI1 1749 aa9.92□□□□□ -0.82
RNF41-204ENST00000548120 TRPM3Q9HCF6 1732 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms