RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 TRPM1Q7Z4N2 1603 aa30.93■■■□□ 2.54
USP44-204ENST00000547951 BRWD3Q6RI45 1802 aa30.93■■■□□ 2.54
USP44-204ENST00000547951 QRICH2Q9H0J4 1663 aa30.93■■■□□ 2.54
USP44-204ENST00000547951 NRAPQ86VF7 1730 aa30.93■■■□□ 2.54
USP44-204ENST00000547951 CENPJQ9HC77 1338 aaPredicted RBP30.91■■■□□ 2.54
USP44-204ENST00000547951 VPS72Q15906 364 aa30.9■■■□□ 2.54
USP44-204ENST00000547951 ACEP12821 1306 aa30.9■■■□□ 2.54
USP44-204ENST00000547951 POLR3AO14802 1390 aaPredicted RBP30.89■■■□□ 2.54
USP44-204ENST00000547951 CCDC61Q9Y6R9 512 aa30.88■■■□□ 2.53
USP44-204ENST00000547951 COL14A1Q05707 1796 aaKnown RBP30.87■■■□□ 2.53
USP44-204ENST00000547951 NBPF8Q3BBV2 869 aa30.86■■■□□ 2.53
USP44-204ENST00000547951 NUTM2GQ5VZR2 741 aa30.86■■■□□ 2.53
USP44-204ENST00000547951 CABP2Q9NPB3 220 aa30.86■■■□□ 2.53
USP44-204ENST00000547951 CCDC9Q9Y3X0 531 aaKnown RBP30.86■■■□□ 2.53
USP44-204ENST00000547951 PHRF1Q9P1Y6 1649 aaKnown RBP30.86■■■□□ 2.53
USP44-204ENST00000547951 BTG4Q9NY30 223 aa30.85■■■□□ 2.53
USP44-204ENST00000547951 PLEKHG3A1L390 1219 aa30.84■■■□□ 2.53
USP44-204ENST00000547951 SRPK2P78362 688 aaKnown RBP30.84■■■□□ 2.53
USP44-204ENST00000547951 SEPT12Q8IYM1 358 aa30.83■■■□□ 2.53
USP44-204ENST00000547951 PPIP5K1Q6PFW1 1433 aa30.82■■■□□ 2.52
USP44-204ENST00000547951 KIAA0232Q92628 1395 aa30.79■■■□□ 2.52
USP44-204ENST00000547951 PRDM11Q9NQV5 511 aa30.78■■■□□ 2.52
USP44-204ENST00000547951 ROCK2O75116 1388 aaKnown RBP30.78■■■□□ 2.52
USP44-204ENST00000547951 ONECUT3O60422 494 aaPredicted RBP30.77■■■□□ 2.52
USP44-204ENST00000547951 CHRNA2Q15822 529 aa30.77■■■□□ 2.52
USP44-204ENST00000547951 NRKQ7Z2Y5 1582 aa30.75■■■□□ 2.51
USP44-204ENST00000547951 ZC3H6P61129 1189 aaKnown RBP30.74■■■□□ 2.51
USP44-204ENST00000547951 FAM98CQ17RN3 349 aaKnown RBP30.74■■■□□ 2.51
USP44-204ENST00000547951 CABP1Q9NZU7 370 aa30.73■■■□□ 2.51
USP44-204ENST00000547951 ABTB2Q8N961 1025 aa30.72■■■□□ 2.51
USP44-204ENST00000547951 SPATA31A5Q5VU36 1347 aa30.71■■■□□ 2.51
USP44-204ENST00000547951 SPATA31A7Q8IWB4 1347 aa30.71■■■□□ 2.51
USP44-204ENST00000547951 A0A0G2JS52 829 aa30.69■■■□□ 2.5
USP44-204ENST00000547951 MYT1Q01538 1121 aa30.69■■■□□ 2.5
USP44-204ENST00000547951 KRT27Q7Z3Y8 459 aa30.68■■■□□ 2.5
USP44-204ENST00000547951 USP19O94966 1318 aa30.68■■■□□ 2.5
USP44-204ENST00000547951 EVC2Q86UK5 1308 aa30.67■■■□□ 2.5
USP44-204ENST00000547951 USP6P35125 1406 aa30.66■■■□□ 2.5
USP44-204ENST00000547951 CCDC125Q86Z20 511 aa30.66■■■□□ 2.5
USP44-204ENST00000547951 BLMP54132 1417 aaPredicted RBP30.65■■■□□ 2.5
USP44-204ENST00000547951 THSD7AQ9UPZ6 1657 aa30.65■■■□□ 2.5
USP44-204ENST00000547951 STRN4Q9NRL3 753 aa30.65■■■□□ 2.5
USP44-204ENST00000547951 LMO7Q8WWI1 1683 aa30.63■■■□□ 2.49
USP44-204ENST00000547951 CAMTA1Q9Y6Y1 1673 aa30.63■■■□□ 2.49
USP44-204ENST00000547951 DEFB132Q7Z7B7 95 aa30.62■■■□□ 2.49
USP44-204ENST00000547951 SSH2Q76I76 1423 aa30.62■■■□□ 2.49
USP44-204ENST00000547951 PIK3C2AO00443 1686 aa30.62■■■□□ 2.49
USP44-204ENST00000547951 FAM182BQ5T319 152 aa30.61■■■□□ 2.49
USP44-204ENST00000547951 SPATA31A1Q5TZJ5 1347 aa30.61■■■□□ 2.49
USP44-204ENST00000547951 CPDO75976 1380 aa30.6■■■□□ 2.49
USP44-204ENST00000547951 SRCAPQ6ZRS2 3230 aa30.6■■■□□ 2.49
USP44-204ENST00000547951 AKAP12Q02952 1782 aa30.59■■■□□ 2.49
USP44-204ENST00000547951 GCP02774 474 aa30.59■■■□□ 2.49
USP44-204ENST00000547951 TRIM26Q12899 539 aaPredicted RBP30.59■■■□□ 2.49
USP44-204ENST00000547951 NLRP13Q86W25 1043 aa30.59■■■□□ 2.49
USP44-204ENST00000547951 TONSLQ96HA7 1378 aa30.58■■■□□ 2.49
USP44-204ENST00000547951 BRD4O60885 1362 aaPredicted RBP30.57■■■□□ 2.48
USP44-204ENST00000547951 CARD11Q9BXL7 1154 aa30.57■■■□□ 2.48
USP44-204ENST00000547951 NLRP6P59044 892 aa30.55■■■□□ 2.48
USP44-204ENST00000547951 USP35Q9P2H5 1018 aa30.55■■■□□ 2.48
USP44-204ENST00000547951 SLIT3O75094 1523 aa30.55■■■□□ 2.48
USP44-204ENST00000547951 LARP1Q6PKG0 1096 aaKnown RBP30.54■■■□□ 2.48
USP44-204ENST00000547951 ZBTB7CA1YPR0 619 aa30.52■■■□□ 2.48
USP44-204ENST00000547951 EVA1CP58658 441 aa30.52■■■□□ 2.48
USP44-204ENST00000547951 ZRANB1Q9UGI0 708 aa30.51■■■□□ 2.47
USP44-204ENST00000547951 TTC21BQ7Z4L5 1316 aa30.5■■■□□ 2.47
USP44-204ENST00000547951 CPSF1Q10570 1443 aaKnown RBP30.5■■■□□ 2.47
USP44-204ENST00000547951 SBNO2Q9Y2G9 1366 aa30.5■■■□□ 2.47
USP44-204ENST00000547951 COL5A2P05997 1499 aaPredicted RBP30.5■■■□□ 2.47
USP44-204ENST00000547951 SF3B2Q13435 895 aaKnown RBP30.49■■■□□ 2.47
USP44-204ENST00000547951 COL18A1P39060 1754 aa30.48■■■□□ 2.47
USP44-204ENST00000547951 MON2Q7Z3U7 1717 aa30.47■■■□□ 2.47
USP44-204ENST00000547951 RGPD1P0DJD0 1748 aa30.45■■■□□ 2.47
USP44-204ENST00000547951 KTN1Q86UP2 1357 aaKnown RBP30.45■■■□□ 2.47
USP44-204ENST00000547951 ZNF692Q9BU19 519 aaPredicted RBP30.45■■■□□ 2.47
USP44-204ENST00000547951 TNS1Q9HBL0 1735 aaKnown RBP30.44■■■□□ 2.46
USP44-204ENST00000547951 CD163L1Q9NR16 1453 aa30.44■■■□□ 2.46
USP44-204ENST00000547951 AATKQ6ZMQ8 1374 aa30.43■■■□□ 2.46
USP44-204ENST00000547951 BARGINQ6ZT62 677 aa30.43■■■□□ 2.46
USP44-204ENST00000547951 SOX12O15370 315 aa30.42■■■□□ 2.46
USP44-204ENST00000547951 TCP11L2Q8N4U5 519 aa30.42■■■□□ 2.46
USP44-204ENST00000547951 RGPD5Q99666 1765 aa30.41■■■□□ 2.46
USP44-204ENST00000547951 AXIN2Q9Y2T1 843 aa30.4■■■□□ 2.46
USP44-204ENST00000547951 TTC21AQ8NDW8 1320 aa30.4■■■□□ 2.46
USP44-204ENST00000547951 NFAT5O94916 1531 aa30.39■■■□□ 2.46
USP44-204ENST00000547951 BAG6P46379 1132 aa30.38■■■□□ 2.45
USP44-204ENST00000547951 EN1Q05925 392 aaPredicted RBP30.38■■■□□ 2.45
USP44-204ENST00000547951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.38■■■□□ 2.45
USP44-204ENST00000547951 CRB1P82279 1406 aa30.38■■■□□ 2.45
USP44-204ENST00000547951 TMC1Q8TDI8 760 aa30.37■■■□□ 2.45
USP44-204ENST00000547951 SLC12A5Q9H2X9 1139 aa30.37■■■□□ 2.45
USP44-204ENST00000547951 PARP4Q9UKK3 1724 aaKnown RBP30.36■■■□□ 2.45
USP44-204ENST00000547951 ARHGEF25Q86VW2 580 aa30.36■■■□□ 2.45
USP44-204ENST00000547951 TRIM37O94972 964 aa30.35■■■□□ 2.45
USP44-204ENST00000547951 NME9Q86XW9 330 aa30.34■■■□□ 2.45
USP44-204ENST00000547951 TESK2Q96S53 571 aa30.34■■■□□ 2.45
USP44-204ENST00000547951 ST20-MTHFSA0A0A6YYL1 179 aa30.33■■■□□ 2.45
USP44-204ENST00000547951 PDE3BQ13370 1112 aa30.33■■■□□ 2.45
USP44-204ENST00000547951 FAM196AQ6ZSG2 479 aa30.33■■■□□ 2.45
USP44-204ENST00000547951 THRAP3Q9Y2W1 955 aaKnown RBP30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms