RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 TNS1Q9HBL0 1735 aaKnown RBP20.2■□□□□ 0.82
CCDC59-202ENST00000547758 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
CCDC59-202ENST00000547758 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
CCDC59-202ENST00000547758 FAM98CQ17RN3 349 aaKnown RBP20.18■□□□□ 0.82
CCDC59-202ENST00000547758 ANKARQ7Z5J8 1434 aa20.16■□□□□ 0.82
CCDC59-202ENST00000547758 ADGRB2O60241 1585 aa20.16■□□□□ 0.82
CCDC59-202ENST00000547758 THSD7AQ9UPZ6 1657 aa20.16■□□□□ 0.82
CCDC59-202ENST00000547758 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
CCDC59-202ENST00000547758 C14orf93Q9H972 538 aaKnown RBP20.15■□□□□ 0.82
CCDC59-202ENST00000547758 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
CCDC59-202ENST00000547758 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
CCDC59-202ENST00000547758 EN1Q05925 392 aaPredicted RBP20.14■□□□□ 0.81
CCDC59-202ENST00000547758 DLC1Q96QB1 1528 aa20.13■□□□□ 0.81
CCDC59-202ENST00000547758 DISP2A7MBM2 1401 aa20.13■□□□□ 0.81
CCDC59-202ENST00000547758 SAFB2Q14151 953 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCDC59-202ENST00000547758 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
CCDC59-202ENST00000547758 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
CCDC59-202ENST00000547758 R3HDM1Q15032 1099 aaKnown RBP20.11■□□□□ 0.81
CCDC59-202ENST00000547758 CFAP70Q5T0N1 1121 aa20.11■□□□□ 0.81
CCDC59-202ENST00000547758 MPHOSPH9Q99550 1183 aa20.11■□□□□ 0.81
CCDC59-202ENST00000547758 FAM182BQ5T319 152 aa20.1■□□□□ 0.81
CCDC59-202ENST00000547758 SPATA31A5Q5VU36 1347 aa20.09■□□□□ 0.81
CCDC59-202ENST00000547758 SPATA31A7Q8IWB4 1347 aa20.09■□□□□ 0.81
CCDC59-202ENST00000547758 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
CCDC59-202ENST00000547758 POGKQ9P215 609 aa20.07■□□□□ 0.8
CCDC59-202ENST00000547758 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
CCDC59-202ENST00000547758 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
CCDC59-202ENST00000547758 EZH2Q15910 746 aaKnown RBP20.05■□□□□ 0.8
CCDC59-202ENST00000547758 RREB1Q92766 1687 aa20.05■□□□□ 0.8
CCDC59-202ENST00000547758 EIF3AQ14152 1382 aaKnown RBP20.05■□□□□ 0.8
CCDC59-202ENST00000547758 ITSN1Q15811 1721 aa20.05■□□□□ 0.8
CCDC59-202ENST00000547758 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
CCDC59-202ENST00000547758 PHRF1Q9P1Y6 1649 aaKnown RBP20.04■□□□□ 0.8
CCDC59-202ENST00000547758 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
CCDC59-202ENST00000547758 NUP188Q5SRE5 1749 aa20.02■□□□□ 0.8
CCDC59-202ENST00000547758 HIRIP3Q9BW71 556 aaPredicted RBP20.02■□□□□ 0.8
CCDC59-202ENST00000547758 PRDM11Q9NQV5 511 aa20.02■□□□□ 0.8
CCDC59-202ENST00000547758 CAMKK2Q96RR4 588 aa20.01■□□□□ 0.79
CCDC59-202ENST00000547758 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
CCDC59-202ENST00000547758 SPATA31A1Q5TZJ5 1347 aa20■□□□□ 0.79
CCDC59-202ENST00000547758 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
CCDC59-202ENST00000547758 TRIM37O94972 964 aa19.99■□□□□ 0.79
CCDC59-202ENST00000547758 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
CCDC59-202ENST00000547758 PAK3O75914 559 aaPredicted RBP19.98■□□□□ 0.79
CCDC59-202ENST00000547758 NGDNQ8NEJ9 315 aaKnown RBP19.98■□□□□ 0.79
CCDC59-202ENST00000547758 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
CCDC59-202ENST00000547758 KIAA0232Q92628 1395 aa19.97■□□□□ 0.79
CCDC59-202ENST00000547758 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
CCDC59-202ENST00000547758 APBA3O96018 575 aa19.96■□□□□ 0.79
CCDC59-202ENST00000547758 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
CCDC59-202ENST00000547758 STRN4Q9NRL3 753 aa19.95■□□□□ 0.78
CCDC59-202ENST00000547758 ATP7BP35670 1465 aa19.94■□□□□ 0.78
CCDC59-202ENST00000547758 CHRNA2Q15822 529 aa19.94■□□□□ 0.78
CCDC59-202ENST00000547758 YY1P25490 414 aa19.92■□□□□ 0.78
CCDC59-202ENST00000547758 NRKQ7Z2Y5 1582 aa19.91■□□□□ 0.78
CCDC59-202ENST00000547758 TOPAZ1Q8N9V7 1692 aa19.91■□□□□ 0.78
CCDC59-202ENST00000547758 ZNF219Q9P2Y4 722 aaPredicted RBP19.91■□□□□ 0.78
CCDC59-202ENST00000547758 SSH2Q76I76 1423 aa19.91■□□□□ 0.78
CCDC59-202ENST00000547758 ZC3H6P61129 1189 aaKnown RBP19.9■□□□□ 0.78
CCDC59-202ENST00000547758 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
CCDC59-202ENST00000547758 BARGINQ6ZT62 677 aa19.9■□□□□ 0.78
CCDC59-202ENST00000547758 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
CCDC59-202ENST00000547758 LMO7Q8WWI1 1683 aa19.9■□□□□ 0.78
CCDC59-202ENST00000547758 ABCB7O75027 752 aa19.89■□□□□ 0.77
CCDC59-202ENST00000547758 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.77
CCDC59-202ENST00000547758 NBPF14Q5TI25 921 aa19.89■□□□□ 0.77
CCDC59-202ENST00000547758 PARP4Q9UKK3 1724 aaKnown RBP19.89■□□□□ 0.77
CCDC59-202ENST00000547758 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
CCDC59-202ENST00000547758 EVA1CP58658 441 aa19.87■□□□□ 0.77
CCDC59-202ENST00000547758 NUDT16Q96DE0 195 aaKnown RBP19.87■□□□□ 0.77
CCDC59-202ENST00000547758 SBF2Q86WG5 1849 aa19.87■□□□□ 0.77
CCDC59-202ENST00000547758 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
CCDC59-202ENST00000547758 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
CCDC59-202ENST00000547758 NUTM2GQ5VZR2 741 aa19.86■□□□□ 0.77
CCDC59-202ENST00000547758 SAMD1Q6SPF0 538 aaPredicted RBP19.85■□□□□ 0.77
CCDC59-202ENST00000547758 PPP1R1BQ9UD71 204 aaPredicted RBP19.85■□□□□ 0.77
CCDC59-202ENST00000547758 POLR3AO14802 1390 aaPredicted RBP19.84■□□□□ 0.77
CCDC59-202ENST00000547758 LARP1Q6PKG0 1096 aaKnown RBP19.84■□□□□ 0.77
CCDC59-202ENST00000547758 TCP11L2Q8N4U5 519 aa19.84■□□□□ 0.77
CCDC59-202ENST00000547758 SPON1Q9HCB6 807 aa19.84■□□□□ 0.77
CCDC59-202ENST00000547758 KDM2AQ9Y2K7 1162 aa19.84■□□□□ 0.77
CCDC59-202ENST00000547758 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.77
CCDC59-202ENST00000547758 PEAK1Q9H792 1746 aa19.83■□□□□ 0.77
CCDC59-202ENST00000547758 CPDO75976 1380 aa19.83■□□□□ 0.76
CCDC59-202ENST00000547758 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
CCDC59-202ENST00000547758 KCNQ2O43526 872 aa19.81■□□□□ 0.76
CCDC59-202ENST00000547758 THRAP3Q9Y2W1 955 aaKnown RBP19.81■□□□□ 0.76
CCDC59-202ENST00000547758 CASZ1Q86V15 1759 aa19.8■□□□□ 0.76
CCDC59-202ENST00000547758 ACEP12821 1306 aa19.8■□□□□ 0.76
CCDC59-202ENST00000547758 CDK19Q9BWU1 502 aa19.79■□□□□ 0.76
CCDC59-202ENST00000547758 LRRC37A3O60309 1634 aa19.79■□□□□ 0.76
CCDC59-202ENST00000547758 COL5A2P05997 1499 aaPredicted RBP19.79■□□□□ 0.76
CCDC59-202ENST00000547758 WNK3Q9BYP7 1800 aa19.79■□□□□ 0.76
CCDC59-202ENST00000547758 USP19O94966 1318 aa19.78■□□□□ 0.76
CCDC59-202ENST00000547758 ABTB2Q8N961 1025 aa19.78■□□□□ 0.76
CCDC59-202ENST00000547758 STAC3Q96MF2 364 aa19.78■□□□□ 0.76
CCDC59-202ENST00000547758 OVOS2A0A0G2JMS6 1433 aa19.77■□□□□ 0.76
CCDC59-202ENST00000547758 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
CCDC59-202ENST00000547758 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.76
CCDC59-202ENST00000547758 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms