RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 PLEKHG5O94827 1062 aa28.62■■■□□ 2.17
C12orf49-203ENST00000547630 NINLQ9Y2I6 1382 aa28.62■■■□□ 2.17
C12orf49-203ENST00000547630 CD163L1Q9NR16 1453 aa28.62■■■□□ 2.17
C12orf49-203ENST00000547630 HDGFL2Q7Z4V5 671 aaPredicted RBP28.62■■■□□ 2.17
C12orf49-203ENST00000547630 POLR3GLQ9BT43 218 aa28.62■■■□□ 2.17
C12orf49-203ENST00000547630 KTN1Q86UP2 1357 aaKnown RBP28.62■■■□□ 2.17
C12orf49-203ENST00000547630 BRD4O60885 1362 aaPredicted RBP28.61■■■□□ 2.17
C12orf49-203ENST00000547630 TERF2IPQ9NYB0 399 aa28.6■■■□□ 2.17
C12orf49-203ENST00000547630 ZEB1P37275 1124 aaPredicted RBP28.59■■■□□ 2.17
C12orf49-203ENST00000547630 MEX3CQ5U5Q3 659 aaKnown RBP28.59■■■□□ 2.17
C12orf49-203ENST00000547630 CABLES1Q8TDN4 633 aa28.59■■■□□ 2.17
C12orf49-203ENST00000547630 SSH2Q76I76 1423 aa28.58■■■□□ 2.17
C12orf49-203ENST00000547630 C11orf95C9JLR9 678 aaPredicted RBP28.58■■■□□ 2.17
C12orf49-203ENST00000547630 NUTM2GQ5VZR2 741 aa28.58■■■□□ 2.17
C12orf49-203ENST00000547630 MON2Q7Z3U7 1717 aa28.57■■■□□ 2.16
C12orf49-203ENST00000547630 A0A1W2PP64 1363 aa28.57■■■□□ 2.16
C12orf49-203ENST00000547630 ABTB2Q8N961 1025 aa28.57■■■□□ 2.16
C12orf49-203ENST00000547630 TTC21BQ7Z4L5 1316 aa28.56■■■□□ 2.16
C12orf49-203ENST00000547630 ADAMTS2O95450 1211 aa28.55■■■□□ 2.16
C12orf49-203ENST00000547630 MYOM1P52179 1685 aa28.54■■■□□ 2.16
C12orf49-203ENST00000547630 HAP1P54257 671 aaPredicted RBP28.54■■■□□ 2.16
C12orf49-203ENST00000547630 NRKQ7Z2Y5 1582 aa28.54■■■□□ 2.16
C12orf49-203ENST00000547630 ANKRD36BQ8N2N9 1353 aa28.53■■■□□ 2.16
C12orf49-203ENST00000547630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.51■■■□□ 2.16
C12orf49-203ENST00000547630 PHF23Q9BUL5 403 aaPredicted RBP28.51■■■□□ 2.16
C12orf49-203ENST00000547630 ABCA3Q99758 1704 aa28.51■■■□□ 2.15
C12orf49-203ENST00000547630 TTC21AQ8NDW8 1320 aa28.51■■■□□ 2.15
C12orf49-203ENST00000547630 EDC4Q6P2E9 1401 aaKnown RBP28.5■■■□□ 2.15
C12orf49-203ENST00000547630 PIK3C2AO00443 1686 aa28.49■■■□□ 2.15
C12orf49-203ENST00000547630 NLRP6P59044 892 aa28.49■■■□□ 2.15
C12orf49-203ENST00000547630 NLRP13Q86W25 1043 aa28.49■■■□□ 2.15
C12orf49-203ENST00000547630 C8orf37Q96NL8 207 aa28.49■■■□□ 2.15
C12orf49-203ENST00000547630 CRYBG1Q9Y4K1 1723 aa28.48■■■□□ 2.15
C12orf49-203ENST00000547630 KIF7Q2M1P5 1343 aa28.47■■■□□ 2.15
C12orf49-203ENST00000547630 MARF1Q9Y4F3 1742 aaKnown RBP28.45■■■□□ 2.14
C12orf49-203ENST00000547630 PHRF1Q9P1Y6 1649 aaKnown RBP28.45■■■□□ 2.14
C12orf49-203ENST00000547630 NME9Q86XW9 330 aa28.44■■■□□ 2.14
C12orf49-203ENST00000547630 NGLY1Q96IV0 654 aa28.44■■■□□ 2.14
C12orf49-203ENST00000547630 USP19O94966 1318 aa28.44■■■□□ 2.14
C12orf49-203ENST00000547630 ZRANB1Q9UGI0 708 aa28.43■■■□□ 2.14
C12orf49-203ENST00000547630 RGS17Q9UGC6 210 aaPredicted RBP28.42■■■□□ 2.14
C12orf49-203ENST00000547630 AFF2P51816 1311 aa28.41■■■□□ 2.14
C12orf49-203ENST00000547630 CARD14Q9BXL6 1004 aa28.4■■■□□ 2.14
C12orf49-203ENST00000547630 GCP02774 474 aa28.39■■■□□ 2.14
C12orf49-203ENST00000547630 CCDC7Q96M83 1385 aa28.39■■■□□ 2.14
C12orf49-203ENST00000547630 ZC3H6P61129 1189 aaKnown RBP28.38■■■□□ 2.13
C12orf49-203ENST00000547630 WASHC2AQ641Q2 1341 aa28.38■■■□□ 2.13
C12orf49-203ENST00000547630 SLIT3O75094 1523 aa28.37■■■□□ 2.13
C12orf49-203ENST00000547630 USP31Q70CQ4 1352 aa28.37■■■□□ 2.13
C12orf49-203ENST00000547630 NSD3Q9BZ95 1437 aa28.37■■■□□ 2.13
C12orf49-203ENST00000547630 PANK3Q9H999 370 aa28.37■■■□□ 2.13
C12orf49-203ENST00000547630 FAM83GA6ND36 823 aa28.36■■■□□ 2.13
C12orf49-203ENST00000547630 FNBP4Q8N3X1 1017 aaPredicted RBP28.35■■■□□ 2.13
C12orf49-203ENST00000547630 KIAA0232Q92628 1395 aa28.34■■■□□ 2.13
C12orf49-203ENST00000547630 SOX12O15370 315 aa28.34■■■□□ 2.13
C12orf49-203ENST00000547630 ZNF772Q68DY9 489 aaPredicted RBP28.34■■■□□ 2.13
C12orf49-203ENST00000547630 PRDM11Q9NQV5 511 aa28.34■■■□□ 2.13
C12orf49-203ENST00000547630 USP54Q70EL1 1684 aa28.33■■■□□ 2.13
C12orf49-203ENST00000547630 USP21Q9UK80 565 aa28.33■■■□□ 2.13
C12orf49-203ENST00000547630 FYB1O15117 783 aa28.32■■■□□ 2.12
C12orf49-203ENST00000547630 KCNH5Q8NCM2 988 aa28.32■■■□□ 2.12
C12orf49-203ENST00000547630 OVOS2A0A0J9YW53 1432 aa28.32■■■□□ 2.12
C12orf49-203ENST00000547630 OVOS2Q6IE36 1432 aa28.32■■■□□ 2.12
C12orf49-203ENST00000547630 SLIT2O94813 1529 aa28.31■■■□□ 2.12
C12orf49-203ENST00000547630 CHRNA2Q15822 529 aa28.31■■■□□ 2.12
C12orf49-203ENST00000547630 POTEAQ6S8J7 498 aa28.31■■■□□ 2.12
C12orf49-203ENST00000547630 GGNBP2Q9H3C7 697 aa28.31■■■□□ 2.12
C12orf49-203ENST00000547630 COG3Q96JB2 828 aa28.3■■■□□ 2.12
C12orf49-203ENST00000547630 PLCH1Q4KWH8 1693 aa28.3■■■□□ 2.12
C12orf49-203ENST00000547630 COL14A1Q05707 1796 aaKnown RBP28.29■■■□□ 2.12
C12orf49-203ENST00000547630 ZBTB7CA1YPR0 619 aa28.29■■■□□ 2.12
C12orf49-203ENST00000547630 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
C12orf49-203ENST00000547630 CPDO75976 1380 aa28.29■■■□□ 2.12
C12orf49-203ENST00000547630 BCL9LQ86UU0 1499 aa28.28■■■□□ 2.12
C12orf49-203ENST00000547630 QTRT2Q9H974 415 aaKnown RBP28.26■■■□□ 2.12
C12orf49-203ENST00000547630 BTG4Q9NY30 223 aa28.26■■■□□ 2.12
C12orf49-203ENST00000547630 CGNL1Q0VF96 1302 aa28.26■■■□□ 2.11
C12orf49-203ENST00000547630 NFAT5O94916 1531 aa28.26■■■□□ 2.11
C12orf49-203ENST00000547630 UNC5CLQ8IV45 518 aa28.25■■■□□ 2.11
C12orf49-203ENST00000547630 NWD2Q9ULI1 1742 aa28.24■■■□□ 2.11
C12orf49-203ENST00000547630 ARHGEF25Q86VW2 580 aa28.24■■■□□ 2.11
C12orf49-203ENST00000547630 TRPC5Q9UL62 973 aaPredicted RBP28.23■■■□□ 2.11
C12orf49-203ENST00000547630 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.22■■■□□ 2.11
C12orf49-203ENST00000547630 KNSTRNQ9Y448 316 aa28.22■■■□□ 2.11
C12orf49-203ENST00000547630 ATRNO75882 1429 aa28.2■■■□□ 2.1
C12orf49-203ENST00000547630 NRAPQ86VF7 1730 aa28.2■■■□□ 2.1
C12orf49-203ENST00000547630 LMO7Q8WWI1 1683 aa28.19■■■□□ 2.1
C12orf49-203ENST00000547630 FBLN1P23142 703 aa28.19■■■□□ 2.1
C12orf49-203ENST00000547630 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
C12orf49-203ENST00000547630 CAMTA1Q9Y6Y1 1673 aa28.18■■■□□ 2.1
C12orf49-203ENST00000547630 COL18A1P39060 1754 aa28.16■■■□□ 2.1
C12orf49-203ENST00000547630 PER1O15534 1290 aaPredicted RBP28.16■■■□□ 2.1
C12orf49-203ENST00000547630 RXRBP28702 533 aa28.16■■■□□ 2.1
C12orf49-203ENST00000547630 ILDR2Q71H61 639 aa28.16■■■□□ 2.1
C12orf49-203ENST00000547630 STRN4Q9NRL3 753 aa28.16■■■□□ 2.1
C12orf49-203ENST00000547630 VPS72Q15906 364 aa28.15■■■□□ 2.1
C12orf49-203ENST00000547630 CCDC9Q9Y3X0 531 aaKnown RBP28.15■■■□□ 2.1
C12orf49-203ENST00000547630 LTN1O94822 1766 aa28.15■■■□□ 2.1
C12orf49-203ENST00000547630 EVA1CP58658 441 aa28.14■■■□□ 2.1
C12orf49-203ENST00000547630 RBM6P78332 1123 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms