RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
HIF1A-205ENST00000547430 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
HIF1A-205ENST00000547430 PDE4CQ08493 712 aa12.48□□□□□ -0.41
HIF1A-205ENST00000547430 TFIP11Q9UBB9 837 aaKnown RBP12.48□□□□□ -0.41
HIF1A-205ENST00000547430 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
HIF1A-205ENST00000547430 FAM160A2Q8N612 972 aaPredicted RBP12.46□□□□□ -0.41
HIF1A-205ENST00000547430 MAFBQ9Y5Q3 323 aaPredicted RBP12.46□□□□□ -0.41
HIF1A-205ENST00000547430 CCNYL3P0C7X3 344 aa12.45□□□□□ -0.42
HIF1A-205ENST00000547430 MMP16P51512 607 aa12.45□□□□□ -0.42
HIF1A-205ENST00000547430 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
HIF1A-205ENST00000547430 SPSB2Q99619 263 aa12.45□□□□□ -0.42
HIF1A-205ENST00000547430 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
HIF1A-205ENST00000547430 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
HIF1A-205ENST00000547430 EVA1BQ9NVM1 165 aa12.44□□□□□ -0.42
HIF1A-205ENST00000547430 ATP9BO43861 1147 aa12.43□□□□□ -0.42
HIF1A-205ENST00000547430 CTHP32929 405 aa12.43□□□□□ -0.42
HIF1A-205ENST00000547430 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
HIF1A-205ENST00000547430 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
HIF1A-205ENST00000547430 KRTAP3-2Q9BYR7 98 aa12.43□□□□□ -0.42
HIF1A-205ENST00000547430 COPS2P61201 443 aa12.42□□□□□ -0.42
HIF1A-205ENST00000547430 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
HIF1A-205ENST00000547430 PRDM9Q9NQV7 894 aa12.42□□□□□ -0.42
HIF1A-205ENST00000547430 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
HIF1A-205ENST00000547430 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
HIF1A-205ENST00000547430 GPSM3Q9Y4H4 160 aa12.41□□□□□ -0.42
HIF1A-205ENST00000547430 ATG7O95352 703 aa12.4□□□□□ -0.42
HIF1A-205ENST00000547430 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
HIF1A-205ENST00000547430 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
HIF1A-205ENST00000547430 NFATC2IPQ8NCF5 419 aa12.4□□□□□ -0.42
HIF1A-205ENST00000547430 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
HIF1A-205ENST00000547430 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
HIF1A-205ENST00000547430 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
HIF1A-205ENST00000547430 TLL1O43897 1013 aa12.37□□□□□ -0.43
HIF1A-205ENST00000547430 ZPR1O75312 459 aa12.37□□□□□ -0.43
HIF1A-205ENST00000547430 ADH1BP00325 375 aa12.37□□□□□ -0.43
HIF1A-205ENST00000547430 OCSTAMPQ9BR26 566 aa12.37□□□□□ -0.43
HIF1A-205ENST00000547430 PTK2Q05397 1052 aa12.36□□□□□ -0.43
HIF1A-205ENST00000547430 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
HIF1A-205ENST00000547430 KCTD12Q96CX2 325 aaKnown RBP12.36□□□□□ -0.43
HIF1A-205ENST00000547430 CCDC9Q9Y3X0 531 aaKnown RBP12.36□□□□□ -0.43
HIF1A-205ENST00000547430 ZNF592Q92610 1267 aa12.35□□□□□ -0.43
HIF1A-205ENST00000547430 KANK4Q5T7N3 995 aaPredicted RBP12.34□□□□□ -0.43
HIF1A-205ENST00000547430 MTRQ99707 1265 aa12.34□□□□□ -0.43
HIF1A-205ENST00000547430 BRD1O95696 1058 aa12.33□□□□□ -0.44
HIF1A-205ENST00000547430 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
HIF1A-205ENST00000547430 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
HIF1A-205ENST00000547430 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
HIF1A-205ENST00000547430 TMEM88BA6NKF7 163 aa12.32□□□□□ -0.44
HIF1A-205ENST00000547430 FAM174AQ8TBP5 190 aa12.32□□□□□ -0.44
HIF1A-205ENST00000547430 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
HIF1A-205ENST00000547430 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 POTEMA6NI47 508 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 PATL2C9JE40 543 aaKnown RBP12.31□□□□□ -0.44
HIF1A-205ENST00000547430 SKIP12755 728 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 USP17L2Q6R6M4 530 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
HIF1A-205ENST00000547430 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
HIF1A-205ENST00000547430 ELOAQ14241 798 aaKnown RBP12.3□□□□□ -0.44
HIF1A-205ENST00000547430 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
HIF1A-205ENST00000547430 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
HIF1A-205ENST00000547430 KCNA1Q09470 495 aa12.29□□□□□ -0.44
HIF1A-205ENST00000547430 TJAP1Q5JTD0 557 aa12.29□□□□□ -0.44
HIF1A-205ENST00000547430 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
HIF1A-205ENST00000547430 PTCRAQ6ISU1 281 aaPredicted RBP12.28□□□□□ -0.44
HIF1A-205ENST00000547430 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
HIF1A-205ENST00000547430 ADAM32Q8TC27 787 aa12.28□□□□□ -0.44
HIF1A-205ENST00000547430 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
HIF1A-205ENST00000547430 SLC6A16Q9GZN6 736 aa12.28□□□□□ -0.44
HIF1A-205ENST00000547430 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
HIF1A-205ENST00000547430 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
HIF1A-205ENST00000547430 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
HIF1A-205ENST00000547430 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
HIF1A-205ENST00000547430 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
HIF1A-205ENST00000547430 CHIC2Q9UKJ5 165 aa12.26□□□□□ -0.45
HIF1A-205ENST00000547430 ZMIZ1Q9ULJ6 1067 aa12.26□□□□□ -0.45
HIF1A-205ENST00000547430 SH3RF1Q7Z6J0 888 aa12.25□□□□□ -0.45
HIF1A-205ENST00000547430 RNF135Q8IUD6 432 aa12.25□□□□□ -0.45
HIF1A-205ENST00000547430 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
HIF1A-205ENST00000547430 GZF1Q9H116 711 aaPredicted RBP12.24□□□□□ -0.45
HIF1A-205ENST00000547430 FAM196BA6NMK8 535 aa12.23□□□□□ -0.45
HIF1A-205ENST00000547430 LZTS3O60299 673 aaPredicted RBP12.23□□□□□ -0.45
HIF1A-205ENST00000547430 PTPN5P54829 565 aa12.23□□□□□ -0.45
HIF1A-205ENST00000547430 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
HIF1A-205ENST00000547430 PLPP7Q8NBV4 271 aa12.23□□□□□ -0.45
HIF1A-205ENST00000547430 NCOA4Q13772 614 aa12.22□□□□□ -0.45
HIF1A-205ENST00000547430 TMCO4Q5TGY1 634 aa12.21□□□□□ -0.45
HIF1A-205ENST00000547430 TMEM164Q5U3C3 297 aa12.21□□□□□ -0.45
HIF1A-205ENST00000547430 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
HIF1A-205ENST00000547430 STK32AQ8WU08 396 aa12.21□□□□□ -0.45
HIF1A-205ENST00000547430 MKRN1Q9UHC7 482 aaKnown RBP12.21□□□□□ -0.45
HIF1A-205ENST00000547430 NOVA2Q9UNW9 492 aaKnown RBP12.21□□□□□ -0.45
HIF1A-205ENST00000547430 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L10C9JJH3 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L21D6R901 530 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms