RNA–Protein interactions for RNA: ENST00000547290.1

DDX23-204, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-204ENST00000547290 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
DDX23-204ENST00000547290 ACIN1Q9UKV3 1341 aaKnown RBP13.14□□□□□ -0.31
DDX23-204ENST00000547290 SAFB2Q14151 953 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX23-204ENST00000547290 PSME1Q06323 249 aa13.13□□□□□ -0.31
DDX23-204ENST00000547290 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
DDX23-204ENST00000547290 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
DDX23-204ENST00000547290 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
DDX23-204ENST00000547290 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
DDX23-204ENST00000547290 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
DDX23-204ENST00000547290 HRCP23327 699 aa13.11□□□□□ -0.31
DDX23-204ENST00000547290 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
DDX23-204ENST00000547290 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
DDX23-204ENST00000547290 COL18A1P39060 1754 aa13.11□□□□□ -0.31
DDX23-204ENST00000547290 CAMTA1Q9Y6Y1 1673 aa13.11□□□□□ -0.31
DDX23-204ENST00000547290 CASZ1Q86V15 1759 aa13.1□□□□□ -0.31
DDX23-204ENST00000547290 HIRIP3Q9BW71 556 aaPredicted RBP13.1□□□□□ -0.31
DDX23-204ENST00000547290 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
DDX23-204ENST00000547290 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
DDX23-204ENST00000547290 QRICH2Q9H0J4 1663 aa13.09□□□□□ -0.31
DDX23-204ENST00000547290 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
DDX23-204ENST00000547290 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
DDX23-204ENST00000547290 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
DDX23-204ENST00000547290 PIK3C2AO00443 1686 aa13.08□□□□□ -0.31
DDX23-204ENST00000547290 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
DDX23-204ENST00000547290 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
DDX23-204ENST00000547290 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
DDX23-204ENST00000547290 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
DDX23-204ENST00000547290 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
DDX23-204ENST00000547290 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
DDX23-204ENST00000547290 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
DDX23-204ENST00000547290 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
DDX23-204ENST00000547290 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
DDX23-204ENST00000547290 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
DDX23-204ENST00000547290 BAG6P46379 1132 aa13.06□□□□□ -0.32
DDX23-204ENST00000547290 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
DDX23-204ENST00000547290 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
DDX23-204ENST00000547290 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
DDX23-204ENST00000547290 SLIT3O75094 1523 aa13.06□□□□□ -0.32
DDX23-204ENST00000547290 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
DDX23-204ENST00000547290 POGKQ9P215 609 aa13.05□□□□□ -0.32
DDX23-204ENST00000547290 USP19O94966 1318 aa13.04□□□□□ -0.32
DDX23-204ENST00000547290 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
DDX23-204ENST00000547290 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
DDX23-204ENST00000547290 CPDO75976 1380 aa13.03□□□□□ -0.32
DDX23-204ENST00000547290 USP54Q70EL1 1684 aa13.02□□□□□ -0.32
DDX23-204ENST00000547290 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.33
DDX23-204ENST00000547290 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
DDX23-204ENST00000547290 CHRNA2Q15822 529 aa13.01□□□□□ -0.33
DDX23-204ENST00000547290 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
DDX23-204ENST00000547290 PARD3Q8TEW0 1356 aa13.01□□□□□ -0.33
DDX23-204ENST00000547290 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
DDX23-204ENST00000547290 A0A0G2JS52 829 aa13□□□□□ -0.33
DDX23-204ENST00000547290 MYT1Q01538 1121 aa13□□□□□ -0.33
DDX23-204ENST00000547290 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
DDX23-204ENST00000547290 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
DDX23-204ENST00000547290 MYOM1P52179 1685 aa12.99□□□□□ -0.33
DDX23-204ENST00000547290 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
DDX23-204ENST00000547290 ACEP12821 1306 aa12.98□□□□□ -0.33
DDX23-204ENST00000547290 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
DDX23-204ENST00000547290 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
DDX23-204ENST00000547290 TRIM37O94972 964 aa12.97□□□□□ -0.33
DDX23-204ENST00000547290 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
DDX23-204ENST00000547290 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
DDX23-204ENST00000547290 KDM2AQ9Y2K7 1162 aa12.96□□□□□ -0.33
DDX23-204ENST00000547290 NFAT5O94916 1531 aa12.96□□□□□ -0.33
DDX23-204ENST00000547290 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
DDX23-204ENST00000547290 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
DDX23-204ENST00000547290 UTRNP46939 3433 aa12.95□□□□□ -0.34
DDX23-204ENST00000547290 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
DDX23-204ENST00000547290 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
DDX23-204ENST00000547290 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
DDX23-204ENST00000547290 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
DDX23-204ENST00000547290 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
DDX23-204ENST00000547290 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
DDX23-204ENST00000547290 CDK19Q9BWU1 502 aa12.95□□□□□ -0.34
DDX23-204ENST00000547290 USP6P35125 1406 aa12.95□□□□□ -0.34
DDX23-204ENST00000547290 LTN1O94822 1766 aa12.94□□□□□ -0.34
DDX23-204ENST00000547290 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
DDX23-204ENST00000547290 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
DDX23-204ENST00000547290 CRB1P82279 1406 aa12.94□□□□□ -0.34
DDX23-204ENST00000547290 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
DDX23-204ENST00000547290 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
DDX23-204ENST00000547290 OVOS2A0A0G2JMS6 1433 aa12.92□□□□□ -0.34
DDX23-204ENST00000547290 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
DDX23-204ENST00000547290 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
DDX23-204ENST00000547290 ABCC6O95255 1503 aa12.92□□□□□ -0.34
DDX23-204ENST00000547290 BCL9O00512 1426 aa12.91□□□□□ -0.34
DDX23-204ENST00000547290 APBA3O96018 575 aa12.91□□□□□ -0.34
DDX23-204ENST00000547290 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
DDX23-204ENST00000547290 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
DDX23-204ENST00000547290 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
DDX23-204ENST00000547290 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
DDX23-204ENST00000547290 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
DDX23-204ENST00000547290 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
DDX23-204ENST00000547290 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
DDX23-204ENST00000547290 BRD4O60885 1362 aaPredicted RBP12.9□□□□□ -0.34
DDX23-204ENST00000547290 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
DDX23-204ENST00000547290 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
DDX23-204ENST00000547290 BTAF1O14981 1849 aa12.9□□□□□ -0.34
DDX23-204ENST00000547290 GCP02774 474 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms